Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A493T43 Lonicera japonica HOM05D000151 ORTHO05D000074 2.0e-94 349.0 163 100.0
Lj2A495T44 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-76 289.7 278 56.5
Lj2P471T10 Lonicera japonica HOM05D000151 ORTHO05D000074 4.5e-30 135.2 155 47.7
Lj2P494T20 Lonicera japonica HOM05D000151 ORTHO05D000074 7.2e-28 127.9 82 75.6
Lj2P495T35 Lonicera japonica HOM05D000151 ORTHO05D000074 1.2e-27 127.1 82 73.2
Lj2P493T39 Lonicera japonica HOM05D000151 ORTHO05D000074 4.7e-27 125.2 82 72.0
Lj3C74T1 Lonicera japonica HOM05D000151 ORTHO05D000074 6.1e-27 124.8 152 44.7
Lj2C471T6 Lonicera japonica HOM05D000151 ORTHO05D000074 8.0e-27 124.4 156 43.6
Lj2C464T4 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-26 123.6 155 45.2
Lj2C471G1 Lonicera japonica HOM05D000151 ORTHO05D000074 5.2e-26 121.7 155 44.5
Lj2C479T1 Lonicera japonica HOM05D000151 ORTHO05D000074 7.5e-25 117.9 161 40.4
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 4.9e-24 115.2 148 40.5
Lj2P496T12 Lonicera japonica HOM05D000151 ORTHO05D000074 6.3e-24 114.8 313 29.1
Lj2P493T22 Lonicera japonica HOM05D000151 ORTHO05D000074 8.3e-24 114.4 313 29.1
Lj2C483T3 Lonicera japonica HOM05D000151 ORTHO05D000074 3.5e-22 109.0 152 38.2
Lj2P549T12 Lonicera japonica HOM05D000151 ORTHO05D000074 4.5e-22 108.6 80 60.0
Lj2C500G2 Lonicera japonica HOM05D000151 ORTHO05D000074 1.0e-21 107.5 139 43.2
Lj2P442T32 Lonicera japonica HOM05D000151 ORTHO05D000074 2.3e-21 106.3 83 59.0
Lj2P470T21 Lonicera japonica HOM05D000151 ORTHO05D000074 3.3e-20 102.4 152 40.8
Lj2A464T37 Lonicera japonica HOM05D000151 ORTHO05D000074 1.8e-18 96.7 75 60.0
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 3.1e-18 95.9 99 47.5
QL01p002550 Quercus lobata HOM05D000151 ORTHO05D000074 5.2e-18 95.1 151 37.7
Lj2P933T11 Lonicera japonica HOM05D000151 ORTHO05D000074 2.0e-17 93.2 89 50.6
Lj1P1142T22 Lonicera japonica HOM05D000151 ORTHO05D000074 7.5e-17 91.3 81 54.3
Lj2P476T19 Lonicera japonica HOM05D000151 ORTHO05D000074 7.5e-17 91.3 81 55.6
QL09p049374 Quercus lobata HOM05D000151 ORTHO05D000074 1.3e-16 90.5 146 37.0
Lj2C470T4 Lonicera japonica HOM05D000151 ORTHO05D000074 2.2e-16 89.7 70 57.1
Rhsim03G0212000 Rhododendron simsii HOM05D000002 ORTHO05D001134 6.4e-16 88.2 157 33.1
Lj2P494T39 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-15 87.4 58 63.8
Lj2P496T21 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-15 87.4 60 66.7
Lj2P493T31 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-15 87.0 58 63.8
Lj3A74T15 Lonicera japonica HOM05D000151 ORTHO05D000074 1.9e-15 86.7 123 39.0
CiPaw.06G046500 Carya illinoinensis HOM05D000151 ORTHO05D000074 7.0e-15 84.7 151 35.1
Lj2P438T42 Lonicera japonica HOM05D000151 ORTHO05D000074 7.0e-15 84.7 146 32.2
CiPaw.06G077200 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.2e-14 84.0 137 37.2
Lj2A477T14 Lonicera japonica HOM05D000151 ORTHO05D000074 1.2e-14 84.0 64 57.8
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 4.6e-14 82.0 84 46.4
Lj2P472T30 Lonicera japonica HOM05D000151 ORTHO05D000074 7.8e-14 81.3 61 57.4
Peaxi162Scf00038g02647 Petunia axillaris HOM05D000115 ORTHO05D003511 1.3e-13 80.5 142 38.0
CiPaw.07G005300 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.7e-13 80.1 80 43.8
Lj7C20G3 Lonicera japonica HOM05D000151 ORTHO05D000074 3.0e-13 79.3 150 34.0
Lj2A478T11 Lonicera japonica HOM05D000151 ORTHO05D000074 6.6e-13 78.2 63 55.6
Aqoxy5G01063 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.6e-12 75.1 102 37.3
Aqoxy5G01069 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.6e-12 75.1 102 37.3
Haze_22770 Corylus avellana HOM05D000151 ORTHO05D000074 5.6e-12 75.1 76 43.4
Haze_22777 Corylus avellana HOM05D000151 ORTHO05D000074 5.6e-12 75.1 76 43.4
Lj4A311T25 Lonicera japonica HOM05D000151 ORTHO05D000074 5.6e-12 75.1 117 35.0
Peaxi162Scf00074g00085 Petunia axillaris HOM05D000151 ORTHO05D000074 9.5e-12 74.3 73 49.3
Peaxi162Scf00074g00086 Petunia axillaris HOM05D000151 ORTHO05D000074 9.5e-12 74.3 73 49.3
Peaxi162Scf00074g00087 Petunia axillaris HOM05D000151 ORTHO05D000074 9.5e-12 74.3 73 49.3
Peaxi162Scf00119g00123 Petunia axillaris HOM05D000151 ORTHO05D000074 1.6e-11 73.6 72 48.6
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 1.6e-11 73.6 72 48.6
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 1.6e-11 73.6 72 48.6
Haze_24983 Corylus avellana HOM05D000080 ORTHO05D001194 3.6e-11 72.4 76 43.4
ClCG05G015310 Citrullus lanatus HOM05D000151 ORTHO05D000074 6.2e-11 71.6 144 33.3
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 6.2e-11 71.6 85 41.2
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.1e-10 70.9 76 38.2
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 1.1e-10 70.9 97 35.1
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 1.4e-10 70.5 97 35.1
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 1.4e-10 70.5 102 36.3
Lj2A480T50 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-10 70.5 116 37.1
CAN.G311.85 Capsicum annuum HOM05D000151 ORTHO05D000074 1.8e-10 70.1 121 31.4
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-10 70.1 90 40.0
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.1e-10 69.3 101 36.6
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 5.2e-10 68.6 97 33.0
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 6.8e-10 68.2 77 45.5
Solyc04g082060.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 8.9e-10 67.8 101 34.7
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 1.2e-09 67.4 89 41.6
Sopen04g035710 Solanum pennellii HOM05D000151 ORTHO05D000074 1.2e-09 67.4 101 34.7
PGSC0003DMG400009960 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-09 67.4 97 36.1
QL03p049732 Quercus lobata HOM05D000151 ORTHO05D000074 1.5e-09 67.0 70 41.4
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 2.0e-09 66.6 90 37.8
MELO3C017000.2 Cucumis melo HOM05D000151 ORTHO05D000074 2.0e-09 66.6 144 31.9
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 2.6e-09 66.2 151 26.5
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.6e-09 66.2 121 30.6
CsaV3_4G037010 Cucumis sativus L. HOM05D000151 ORTHO05D000074 4.4e-09 65.5 144 32.6
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 4.4e-09 65.5 132 31.8
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.5e-09 64.7 77 37.7
Sopen02g036610 Solanum pennellii HOM05D000644 ORTHO05D000504 9.8e-09 64.3 74 44.6
Cfa018500 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.3e-08 63.9 74 45.9
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.7e-08 63.5 109 35.8
Lj4C490T10 Lonicera japonica HOM05D000151 ORTHO05D000074 2.9e-08 62.8 39 66.7
QL04p009594 Quercus lobata HOM05D000151 ORTHO05D000074 2.9e-08 62.8 137 30.7
Solyc02g092020.3 Solanum lycopersicum HOM05D000151 ORTHO05D000074 2.9e-08 62.8 120 35.8
Sopen02g036600 Solanum pennellii HOM05D000151 ORTHO05D000074 2.9e-08 62.8 74 43.2
Ciclev10017666m.g Citrus clementina HOM05D000151 ORTHO05D000074 4.9e-08 62.0 56 51.8
Peaxi162Scf00096g01844 Petunia axillaris HOM05D000151 ORTHO05D000074 4.9e-08 62.0 74 43.2
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 6.4e-08 61.6 100 35.0
Lsat_1_v5_gn_9_46700 Lactuca sativa HOM05D000151 ORTHO05D000074 6.4e-08 61.6 98 33.7
MBI18_g17004_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.4e-08 61.6 65 38.5
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 6.4e-08 61.6 97 32.0
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 6.4e-08 61.6 76 38.2
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.4e-08 61.6 68 42.6
Lalb_Chr00c03g0404381 Lupinus albus HOM05D000151 ORTHO05D000074 8.3e-08 61.2 140 29.3
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 8.3e-08 61.2 85 34.1
arahy.Tifrunner.gnm1.ann1.NJ4X6S Arachis hypogaea HOM05D000151 ORTHO05D000074 1.1e-07 60.8 88 33.0
Lj7A17T42 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-07 60.8 73 45.2
Peaxi162Scf00174g01118 Petunia axillaris HOM05D000151 ORTHO05D000074 1.1e-07 60.8 83 34.9
Haze_17578 Corylus avellana HOM05D000151 ORTHO05D000074 1.4e-07 60.5 74 44.6
Lj2A451T46 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-07 60.5 131 32.8
MBI18_g19079_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D004234 1.4e-07 60.5 65 40.0
MBI18_g45941_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.4e-07 60.5 65 40.0
PGR031G1698 Punica granatum HOM05D000151 ORTHO05D000074 1.4e-07 60.5 87 34.5
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 1.9e-07 60.1 94 35.1
TWI56G0047 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.4e-07 59.7 64 42.2
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.4e-07 59.7 146 32.2
Lsat_1_v5_gn_2_5520 Lactuca sativa HOM05D000151 ORTHO05D000074 3.2e-07 59.3 97 32.0
Lj2C500G3 Lonicera japonica HOM05D000151 ORTHO05D000074 3.2e-07 59.3 43 65.1
Lalb_Chr09g0321401 Lupinus albus HOM05D000151 ORTHO05D000074 3.2e-07 59.3 133 31.6
Solyc02g070830.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.1e-07 58.9 69 46.4
Atru.chr12.669 Acer truncatum HOM05D000151 ORTHO05D000074 5.4e-07 58.5 80 40.0
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.4e-07 58.5 84 38.1
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 5.4e-07 58.5 129 29.5
Oeu030066.1 Olea europaea HOM05D000151 ORTHO05D000074 5.4e-07 58.5 131 28.2
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.4e-07 58.5 62 43.5
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.4e-07 58.5 122 31.1
Prupe.1G358000 Prunus persica HOM05D000151 ORTHO05D000074 7.1e-07 58.2 85 31.8
Nn5g30877 Nelumbo nucifera HOM05D000151 ORTHO05D000074 9.2e-07 57.8 131 32.1
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.2e-06 57.4 98 34.7
MBI18_g19080_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.2e-06 57.4 57 43.9
Oeu023255.1 Olea europaea HOM05D000151 ORTHO05D000074 1.2e-06 57.4 125 28.0
Atru.chr12.695 Acer truncatum HOM05D000151 ORTHO05D000074 1.6e-06 57.0 80 40.0
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 1.6e-06 57.0 65 40.0
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 1.6e-06 57.0 98 30.6
FAN22G0819 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.6e-06 57.0 114 28.9
MBI18_g40419_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.6e-06 57.0 65 38.5
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 1.6e-06 57.0 83 36.1
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.1e-06 56.6 103 30.1
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 2.1e-06 56.6 86 32.6
arahy.Tifrunner.gnm1.ann1.2H6W8Q Arachis hypogaea HOM05D000151 ORTHO05D000074 2.7e-06 56.2 68 39.7
arahy.Tifrunner.gnm1.ann1.F20K0V Arachis hypogaea HOM05D000151 ORTHO05D000074 2.7e-06 56.2 68 39.7
EL10Ac4g08311 Beta vulgaris HOM05D000151 ORTHO05D000074 2.7e-06 56.2 62 48.4
CSS0034097 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.7e-06 56.2 83 34.9
Dinv01675 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-06 56.2 70 38.6
Lj2P485T10 Lonicera japonica HOM05D000151 ORTHO05D000074 2.7e-06 56.2 38 57.9
Lj2P545T26 Lonicera japonica HOM05D000151 ORTHO05D000074 2.7e-06 56.2 40 62.5
MBI15_g35732_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.7e-06 56.2 78 35.9
MBI15_g42786_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.7e-06 56.2 78 34.6
PSO210G2694 Papaver somniferum HOM05D000151 ORTHO05D000074 2.7e-06 56.2 82 39.0
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.5e-06 55.8 82 31.7
Lj2C486T14 Lonicera japonica HOM05D000151 ORTHO05D000074 3.5e-06 55.8 39 56.4
Lj2P464T10 Lonicera japonica HOM05D000151 ORTHO05D000074 3.5e-06 55.8 37 62.2
PGSC0003DMG402009543 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.5e-06 55.8 126 30.2
arahy.Tifrunner.gnm1.ann1.65DGHI Arachis hypogaea HOM05D000151 ORTHO05D000074 4.6e-06 55.5 67 40.3
arahy.Tifrunner.gnm1.ann1.F1QGJW Arachis hypogaea HOM05D000151 ORTHO05D000074 4.6e-06 55.5 67 40.3
CSS0023563 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.6e-06 55.5 57 45.6
DCAR_030420 Daucus carota HOM05D000151 ORTHO05D000074 4.6e-06 55.5 65 40.0
ECA232G2391 Erigeron canadensis HOM05D000151 ORTHO05D000074 4.6e-06 55.5 90 32.2
RcHm_v2.0_Chr4g0393001 Rosa chinensis HOM05D007346 ORTHO05D009044 4.6e-06 55.5 71 39.4
SalBow6G1188 Salvia bowleyana HOM05D000151 ORTHO05D000074 4.6e-06 55.5 83 38.6
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 6.0e-06 55.1 76 34.2
Lj2P518T28 Lonicera japonica HOM05D000151 ORTHO05D000074 6.0e-06 55.1 39 59.0
Psat0s4081g0040 Pisum sativum HOM05D000151 ORTHO05D000074 6.0e-06 55.1 167 26.9
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 6.0e-06 55.1 88 33.0
FvH4_4g02080 Fragaria vesca HOM05D007346 ORTHO05D009044 7.8e-06 54.7 64 42.2
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 7.8e-06 54.7 82 31.7


User provided reference genes

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