Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.9e-96 355.9 189 100.0
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.7e-52 209.9 169 66.9
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.2e-50 203.8 168 64.9
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 3.9e-49 198.7 173 61.3
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 4.7e-47 191.8 170 62.4
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.8e-46 189.9 180 60.6
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 5.2e-46 188.3 217 52.5
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 2.0e-45 186.4 170 58.2
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.0e-45 186.4 170 58.8
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 2.0e-45 186.4 180 58.3
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.6e-45 186.0 180 57.8
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 3.4e-45 185.7 181 59.7
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 7.6e-45 184.5 180 58.9
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.3e-44 183.7 176 56.2
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.2e-44 183.0 180 58.9
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 2.2e-44 183.0 170 60.6
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 4.9e-44 181.8 170 60.0
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 6.4e-44 181.4 170 58.8
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 8.4e-44 181.0 183 57.9
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.1e-43 180.6 168 58.9
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 3.2e-43 179.1 170 57.1
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 5.4e-43 178.3 170 57.6
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.6e-42 176.8 170 57.6
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 3.5e-42 175.6 168 55.4
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 3.5e-42 175.6 170 59.4
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 5.1e-41 171.8 171 53.2
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 5.1e-41 171.8 170 57.6
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 9.6e-40 167.5 170 57.1
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.2e-39 167.2 172 53.5
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 1.8e-38 163.3 176 53.4
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 2.4e-38 162.9 168 56.0
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 4.0e-38 162.2 168 55.4
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.0e-38 162.2 170 54.1
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.0e-38 162.2 168 55.4
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 4.0e-38 162.2 171 56.1
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 3.4e-37 159.1 153 58.8
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 4.4e-37 158.7 171 52.0
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 7.6e-37 157.9 181 50.3
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 7.6e-37 157.9 181 49.7
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.7e-36 156.8 170 52.9
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 2.2e-36 156.4 176 52.3
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 2.9e-36 156.0 179 50.8
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 3.8e-36 155.6 170 50.6
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.9e-36 155.2 181 49.2
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 8.4e-36 154.5 149 58.4
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 2.1e-34 149.8 170 50.6
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.1e-34 149.8 166 50.0
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.6e-34 148.7 181 47.0
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 7.8e-34 147.9 170 50.0
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 1.0e-33 147.5 170 49.4
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.3e-33 147.1 131 58.0
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.3e-33 147.1 175 52.0
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 1.3e-33 147.1 154 53.2
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.7e-33 146.7 170 50.0
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 2.3e-33 146.4 170 50.6
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.3e-33 146.4 167 54.5
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 2.3e-33 146.4 167 53.3
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 8.7e-33 144.4 170 48.8
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.5e-32 143.7 170 47.1
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 2.5e-32 142.9 171 49.7
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.3e-31 140.6 163 52.1
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.6e-31 140.2 171 51.5
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 2.1e-31 139.8 170 49.4
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 3.6e-31 139.0 167 50.3
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 5.3e-30 135.2 165 49.7
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.5e-29 133.7 104 71.2
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.6e-29 132.9 175 45.1
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 1.7e-28 130.2 190 41.6
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 3.8e-28 129.0 171 45.0
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 5.4e-27 125.2 175 45.1
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 5.4e-27 125.2 178 43.8
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 7.1e-27 124.8 171 46.2
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 3.0e-25 119.4 187 43.9
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 5.1e-25 118.6 112 59.8
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 8.7e-25 117.9 168 42.9
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 8.7e-25 117.9 181 38.7
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 3.7e-23 112.5 148 45.9
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.4e-22 110.5 117 53.0
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 4.0e-22 109.0 164 41.5
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 7.6e-21 104.8 104 54.8
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 3.8e-20 102.4 173 42.2
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 8.4e-20 101.3 179 38.5
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 9.3e-19 97.8 177 36.7
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 2.7e-18 96.3 171 39.2
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.3e-17 94.0 126 45.2
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 4.3e-16 89.0 151 39.7
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.1e-14 84.3 176 36.9
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 5.8e-13 78.6 60 65.0
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 2.2e-12 76.6 106 47.2
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 3.2e-11 72.8 121 36.4
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 4.6e-10 68.9 90 50.0
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 6.1e-10 68.6 70 52.9
HPP92_009695 Vanilla planifolia HOM05D007356 ORTHO05D009247 6.9e-06 55.1 101 39.6


User provided reference genes

Program Settings