Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A408T57 Lonicera japonica HOM05D004825 ORTHO05D005415 5.8e-92 340.9 173 100.0
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 8.7e-48 194.1 194 61.3
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 1.3e-43 180.3 185 53.0
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 1.1e-42 177.2 193 58.5
QL02p047782 Quercus lobata HOM05D004825 ORTHO05D005415 1.4e-42 176.8 102 80.4
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 1.2e-41 173.7 102 77.5
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 3.6e-41 172.2 102 76.5
ClCG11G007440 Citrullus lanatus HOM05D004825 ORTHO05D005415 3.9e-40 168.7 102 81.4
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 5.1e-40 168.3 102 76.5
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 4.3e-39 165.2 102 72.5
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 5.7e-39 164.9 184 50.5
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 1.7e-38 163.3 105 72.4
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 2.2e-38 162.9 160 53.8
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 2.2e-38 162.9 178 51.1
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 2.8e-38 162.5 186 50.5
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 2.8e-38 162.5 172 56.4
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 4.8e-38 161.8 185 52.4
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.1e-37 160.6 102 70.6
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 1.4e-37 160.2 101 78.2
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 1.4e-37 160.2 102 71.6
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 2.4e-37 159.5 101 79.2
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 3.1e-37 159.1 102 71.6
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 4.1e-37 158.7 199 45.7
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 4.1e-37 158.7 102 77.5
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 4.1e-37 158.7 170 55.9
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 5.3e-37 158.3 102 76.5
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 9.1e-37 157.5 101 70.3
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 1.5e-36 156.8 102 69.6
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 2.6e-36 156.0 192 52.1
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 3.4e-36 155.6 102 74.5
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 7.7e-36 154.5 102 68.6
Nitab4.5_0000167g0010 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.0e-35 154.1 183 45.9
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 1.3e-35 153.7 102 69.6
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 1.4e-34 150.2 150 52.0
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 2.5e-34 149.4 102 73.5
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 2.5e-34 149.4 150 52.7
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 4.2e-34 148.7 101 66.3
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 9.4e-34 147.5 101 64.4
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 9.4e-34 147.5 101 63.4
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 2.7e-33 146.0 102 63.7
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 4.7e-33 145.2 101 70.3
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 6.1e-33 144.8 101 64.4
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 1.0e-32 144.1 101 63.4
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 1.4e-32 143.7 101 62.4
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 6.7e-32 141.4 169 49.7
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 8.8e-32 141.0 102 67.6
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 1.1e-31 140.6 101 67.3
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 2.0e-31 139.8 101 61.4
Solyc11g018720.1 Solanum lycopersicum HOM05D004825 ORTHO05D005415 3.3e-31 139.0 172 45.3
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 3.3e-31 139.0 190 41.6
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 7.4e-31 137.9 101 62.4
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 7.4e-31 137.9 102 60.8
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.3e-30 137.1 101 61.4
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 1.7e-30 136.7 148 49.3
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.2e-30 136.3 101 61.4
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 2.2e-30 136.3 101 67.3
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 2.2e-30 136.3 172 44.8
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 3.7e-30 135.6 101 61.4
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 6.3e-30 134.8 101 56.4
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 8.2e-30 134.4 101 61.4
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 1.1e-29 134.0 190 42.1
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 1.8e-29 133.3 101 62.4
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 2.4e-29 132.9 101 58.4
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 2.4e-29 132.9 101 58.4
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 2.4e-29 132.9 101 62.4
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 2.4e-29 132.9 184 41.8
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 4.1e-29 132.1 101 58.4
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 7.0e-29 131.3 101 59.4
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 7.0e-29 131.3 102 61.8
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 9.1e-29 131.0 101 63.4
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 1.2e-28 130.6 101 64.4
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 1.2e-28 130.6 101 64.4
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 1.2e-28 130.6 101 57.4
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 1.5e-28 130.2 101 56.4
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 1.5e-28 130.2 101 56.4
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 1.5e-28 130.2 101 63.4
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.0e-28 129.8 101 63.4
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 2.6e-28 129.4 101 60.4
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 2.6e-28 129.4 101 60.4
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 2.6e-28 129.4 101 62.4
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 3.5e-28 129.0 101 63.4
COL.COLO4_07809 Corchorus olitorius HOM05D004825 ORTHO05D005415 3.5e-28 129.0 101 63.4
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 4.5e-28 128.6 153 45.8
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 4.5e-28 128.6 101 62.4
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 4.5e-28 128.6 101 55.4
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 4.5e-28 128.6 101 62.4
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 4.5e-28 128.6 101 59.4
Gohir.A09G053832 Gossypium hirsutum HOM05D004825 ORTHO05D005415 1.3e-27 127.1 101 59.4
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 2.2e-27 126.3 101 57.4
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 2.9e-27 125.9 101 56.4
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 3.8e-27 125.6 101 60.4
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 6.5e-27 124.8 101 61.4
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 4.2e-26 122.1 102 56.9
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 4.2e-26 122.1 102 56.9
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 4.2e-26 122.1 102 61.8
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 1.6e-25 120.2 101 62.4
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 1.6e-25 120.2 184 41.3
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 4.7e-25 118.6 101 52.5
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.3e-24 116.3 101 58.4
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.3e-24 116.3 101 58.4
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 3.0e-24 115.9 102 52.0
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 2.6e-23 112.8 184 42.4
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 4.4e-23 112.1 101 55.4
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 2.8e-22 109.4 88 59.1
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 4.1e-21 105.5 101 50.5
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 1.6e-20 103.6 67 64.2
Nitab4.5_0004158g0060 Nicotiana tabacum HOM05D004825 ORTHO05D005415 4.5e-20 102.1 159 39.6
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 5.5e-18 95.1 50 76.0
Pp3c8_14790 Physcomitrium patens HOM05D004825 ORTHO05D005415 1.0e-16 90.9 101 42.6
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 3.0e-16 89.4 70 58.6
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 2.2e-14 83.2 101 40.6
AagrBONN_evm.TU.Sc2ySwM_340.165 Anthoceros agrestis HOM05D004825 ORTHO05D005415 1.1e-13 80.9 101 41.6
DCAR_026472 Daucus carota HOM05D004825 ORTHO05D005415 9.1e-13 77.8 67 52.2
Mapoly0072s0017 Marchantia polymorpha HOM05D004825 ORTHO05D005415 5.9e-12 75.1 101 36.6
Cpa.g.sc18.187 Carica papaya HOM05D004825 ORTHO05D005415 7.5e-07 58.2 125 38.4
Manes.09G172300 Manihot esculenta HOM05D004825 ORTHO05D005415 7.5e-07 58.2 118 38.1
Cpa.g.sc18.189 Carica papaya HOM05D004825 ORTHO05D005415 4.9e-06 55.5 22 100.0


User provided reference genes

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