Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 2.8e-106 388.7 201 100.0
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 8.3e-66 254.2 190 68.4
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 5.4e-65 251.5 172 70.9
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 1.8e-60 236.5 171 67.8
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 1.8e-60 236.5 169 66.9
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 6.8e-60 234.6 170 67.6
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 8.9e-60 234.2 170 66.5
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 8.3e-58 227.6 171 64.9
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 7.0e-57 224.6 176 62.5
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 2.3e-55 219.5 169 64.5
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 6.6e-55 218.0 169 60.4
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 2.5e-54 216.1 170 63.5
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 1.6e-53 213.4 194 56.2
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 3.6e-53 212.2 170 61.8
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 4.7e-53 211.8 193 58.5
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 1.4e-52 210.3 206 53.9
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 3.1e-52 209.1 192 54.2
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 4.0e-52 208.8 194 54.6
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 4.0e-52 208.8 170 62.9
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 6.8e-52 208.0 189 57.1
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 1.5e-51 206.8 176 60.2
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 3.4e-51 205.7 171 57.9
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 9.8e-51 204.1 171 60.2
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 2.2e-50 203.0 189 58.2
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 2.2e-50 203.0 171 59.6
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 3.7e-50 202.2 171 59.1
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 4.9e-50 201.8 154 63.6
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 1.9e-49 199.9 187 57.2
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 9.2e-49 197.6 180 54.4
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 1.2e-48 197.2 171 57.3
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 3.5e-48 195.7 195 52.8
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 2.3e-47 193.0 190 52.6
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 5.0e-47 191.8 194 53.1
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 6.6e-47 191.4 205 47.3
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 1.2e-45 187.2 138 63.8
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 4.7e-45 185.3 193 47.2
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.4e-44 183.7 194 50.0
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 1.8e-44 183.3 190 51.1
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 2.3e-44 183.0 194 49.0
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 2.3e-44 183.0 176 53.4
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 5.2e-44 181.8 189 52.9
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 3.4e-43 179.1 196 49.5
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 3.4e-43 179.1 194 48.5
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 5.8e-43 178.3 170 52.4
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 9.8e-43 177.6 194 49.0
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 1.3e-42 177.2 170 52.9
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 1.7e-42 176.8 165 53.3
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.2e-42 176.4 170 52.9
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 4.9e-42 175.3 175 53.1
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 4.9e-42 175.3 171 52.6
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 1.1e-41 174.1 195 49.2
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.4e-41 173.7 174 50.6
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.9e-41 173.3 180 53.3
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 2.4e-41 172.9 194 44.3
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 4.1e-41 172.2 194 48.5
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.4e-41 171.8 198 44.4
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 5.4e-41 171.8 173 49.1
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.2e-40 170.6 194 44.3
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.6e-40 170.2 198 44.9
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 2.1e-40 169.9 194 47.4
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 2.1e-40 169.9 166 54.2
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 2.7e-40 169.5 193 47.2
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 2.7e-40 169.5 195 45.6
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 7.8e-40 167.9 173 47.4
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 1.0e-39 167.5 173 46.8
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.3e-39 167.2 198 43.9
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 3.9e-39 165.6 195 47.7
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 3.9e-39 165.6 195 47.7
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 8.6e-39 164.5 197 48.2
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 1.6e-37 160.2 172 46.5
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 2.1e-37 159.8 207 44.9
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 2.3e-36 156.4 196 42.3
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 1.2e-35 154.1 173 50.3
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 2.6e-35 152.9 196 41.3
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 1.3e-34 150.6 199 44.7
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 1.3e-34 150.6 167 46.7
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 8.3e-34 147.9 167 46.1
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 2.4e-33 146.4 172 48.3
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 2.4e-33 146.4 173 47.4
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.0e-31 141.0 130 52.3
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 1.3e-31 140.6 172 45.3
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 3.0e-31 139.4 130 53.1
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 1.5e-30 137.1 183 42.1
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 2.5e-30 136.3 183 42.1
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 3.6e-29 132.5 175 44.0
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 2.0e-27 126.7 129 46.5
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 3.8e-26 122.5 178 40.4
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 3.8e-26 122.5 101 53.5
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 2.6e-19 99.8 126 40.5
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.6e-19 99.8 126 40.5
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.3e-18 97.4 126 39.7
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 4.2e-17 92.4 100 52.0
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.0e-16 88.6 78 59.0
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 3.4e-11 72.8 203 30.0
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 2.4e-09 66.6 203 27.1
FAN04G1389 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.6e-06 55.5 47 48.9


User provided reference genes

Program Settings