Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 9.4e-121 436.8 209 100.0
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 1.1e-108 396.7 201 92.0
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 5.0e-106 387.9 198 90.4
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 6.5e-106 387.5 200 90.0
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.4e-105 386.3 199 89.9
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 4.2e-105 384.8 199 89.4
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 7.2e-105 384.0 201 88.6
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 2.7e-104 382.1 198 87.9
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 3.9e-103 378.3 200 87.5
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.1e-102 376.7 200 88.0
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 2.0e-102 375.9 199 86.4
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.6e-102 375.6 199 85.9
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 4.4e-102 374.8 201 86.6
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 7.4e-102 374.0 198 86.4
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 7.4e-102 374.0 198 86.4
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 9.7e-102 373.6 198 86.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.3e-101 373.2 200 85.5
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 1.3e-101 373.2 198 86.4
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.7e-101 372.9 199 85.4
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.7e-101 372.9 200 85.5
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.7e-101 371.7 199 86.4
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.7e-101 371.7 201 85.1
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 3.7e-101 371.7 200 86.0
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 3.7e-101 371.7 200 86.0
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 4.8e-101 371.3 201 85.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 6.3e-101 370.9 200 84.5
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 8.2e-101 370.5 201 85.6
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.1e-100 370.2 192 88.0
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.1e-100 370.2 198 86.4
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 3.1e-100 368.6 201 85.1
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 2.6e-99 365.5 198 83.3
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.6e-99 365.5 201 83.6
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 2.6e-99 365.5 199 85.9
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 2.6e-99 365.5 194 86.6
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.5e-99 365.2 200 84.5
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 4.5e-99 364.8 200 84.0
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 4.5e-99 364.8 197 85.8
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 5.9e-99 364.4 207 82.1
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 7.7e-99 364.0 196 85.2
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 7.7e-99 364.0 197 84.8
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 1.0e-98 363.6 200 84.5
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.0e-98 363.6 198 86.4
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.0e-98 363.6 194 86.1
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.3e-98 363.2 200 83.5
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.9e-98 362.1 201 83.6
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 5.0e-98 361.3 201 82.6
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 5.0e-98 361.3 201 83.6
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 8.5e-98 360.5 199 83.4
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 2.5e-97 359.0 196 83.2
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 3.2e-97 358.6 199 84.9
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.2e-97 358.6 199 84.9
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 4.2e-97 358.2 200 83.0
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.2e-97 358.2 198 83.8
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 4.2e-97 358.2 194 85.1
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 2.1e-96 355.9 195 83.6
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 2.1e-96 355.9 199 84.4
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.3e-95 352.4 202 82.2
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 4.0e-95 351.7 199 79.9
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 8.8e-95 350.5 199 80.9
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 2.6e-94 349.0 199 79.4
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 3.3e-94 348.6 199 81.9
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 5.7e-94 347.8 227 73.6
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 5.7e-94 347.8 202 81.7
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 9.7e-94 347.1 196 80.6
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 9.7e-94 347.1 197 78.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 2.8e-93 345.5 203 77.8
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 8.3e-93 344.0 199 79.4
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 8.3e-93 344.0 199 78.9
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 8.3e-93 344.0 199 78.4
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 8.3e-93 344.0 203 77.3
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 1.1e-92 343.6 196 81.6
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.4e-92 343.2 203 78.3
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 1.6e-91 339.7 201 76.6
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 2.0e-91 339.3 200 78.0
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 2.0e-91 339.3 200 78.0
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 7.7e-91 337.4 199 77.4
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 1.3e-90 336.7 189 81.5
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 2.2e-90 335.9 193 80.8
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.2e-88 330.1 198 75.3
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 1.2e-88 330.1 216 74.5
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 6.8e-87 324.3 197 74.6
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 2.6e-86 322.4 202 77.7
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 5.7e-86 321.2 241 66.4
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.3e-85 320.1 193 76.7
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.6e-83 313.2 207 72.9
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 1.6e-83 313.2 207 73.4
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 5.9e-83 311.2 194 71.6
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.6e-82 307.4 169 83.4
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.1e-81 307.0 199 71.4
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 3.3e-81 305.4 236 68.2
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 2.1e-80 302.8 276 58.0
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 2.8e-80 302.4 167 81.4
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 7.0e-76 287.7 164 80.5
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 9.2e-76 287.3 165 78.8
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 9.2e-76 287.3 186 69.4
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 1.2e-70 270.4 148 85.1
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.9e-68 263.1 147 82.3
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.9e-60 236.5 125 87.2
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 5.6e-57 224.9 122 84.4
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 1.1e-55 220.7 128 81.2
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 7.5e-54 214.5 187 61.0
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.7e-53 213.4 121 81.8
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 5.6e-49 198.4 114 82.5
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.1e-47 194.1 197 53.8
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.1e-47 192.6 147 65.3
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 4.9e-45 185.3 105 82.9
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.9e-44 183.3 104 83.7
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 2.3e-42 176.4 423 31.4
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.0e-39 165.6 94 77.7
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.6e-35 153.7 73 94.5
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.0e-34 151.0 215 44.2
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.4e-31 139.8 73 83.6
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 3.2e-28 129.4 72 76.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 2.3e-18 96.7 96 55.2
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-08 62.8 38 76.3
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 6.9e-07 58.5 37 75.7


User provided reference genes

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