Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 1.7e-204 715.7 346 100.0
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.1e-153 547.0 346 75.4
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 3.8e-151 538.5 348 75.0
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 6.0e-149 531.2 348 73.0
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 1.3e-143 513.5 344 72.4
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 6.5e-143 511.1 340 71.8
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 1.0e-140 503.8 343 70.8
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.3e-140 503.4 350 70.0
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.8e-140 503.1 338 71.6
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 3.9e-140 501.9 351 70.1
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 1.9e-139 499.6 352 70.5
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.9e-139 499.6 346 70.5
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 2.5e-139 499.2 344 68.9
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 4.3e-139 498.4 346 70.5
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 4.3e-139 498.4 344 69.5
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 7.4e-139 497.7 342 68.1
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 7.4e-139 497.7 343 68.8
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 1.6e-138 496.5 346 70.2
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 2.8e-138 495.7 343 68.8
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 2.8e-138 495.7 346 71.1
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 3.7e-138 495.4 340 70.3
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 3.7e-138 495.4 344 69.2
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 3.7e-138 495.4 344 69.2
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 6.3e-138 494.6 345 69.9
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 6.3e-138 494.6 346 68.5
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 1.1e-137 493.8 343 68.8
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.4e-137 492.7 344 66.6
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 3.1e-137 492.3 346 66.5
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 5.3e-137 491.5 341 69.5
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 6.9e-137 491.1 341 68.3
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 9.0e-137 490.7 345 68.7
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.5e-136 490.0 344 66.6
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 4.5e-136 488.4 343 70.0
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 1.0e-135 487.3 339 67.6
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 1.7e-135 486.5 342 70.2
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 2.9e-135 485.7 339 67.3
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 2.9e-135 485.7 352 68.2
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 3.8e-135 485.3 339 67.0
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 1.1e-134 483.8 339 67.3
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 5.5e-134 481.5 339 66.7
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 1.2e-133 480.3 340 66.8
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.2e-133 480.3 339 67.8
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 2.7e-133 479.2 340 66.8
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 4.6e-133 478.4 338 66.9
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 7.9e-133 477.6 340 65.9
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 7.9e-133 477.6 338 68.0
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 1.0e-132 477.2 342 69.0
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 1.0e-132 477.2 356 64.9
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 1.0e-132 477.2 345 67.5
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.0e-132 477.2 340 67.6
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 1.8e-132 476.5 345 68.4
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 8.8e-132 474.2 334 68.3
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.1e-131 473.8 340 67.6
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 1.5e-131 473.4 341 67.2
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 1.9e-131 473.0 346 66.8
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 4.3e-131 471.9 345 66.4
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 4.3e-131 471.9 342 68.4
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 4.3e-131 471.9 340 67.4
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 9.7e-131 470.7 344 66.6
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.7e-130 469.9 342 67.0
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 2.8e-130 469.2 342 67.8
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.7e-130 468.8 337 66.8
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 3.7e-130 468.8 350 65.4
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 3.7e-130 468.8 343 66.5
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 1.1e-129 467.2 342 67.5
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 1.8e-129 466.5 347 66.0
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 5.3e-129 464.9 346 65.3
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.5e-128 463.4 346 65.0
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 2.6e-128 462.6 341 65.4
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 3.4e-128 462.2 342 64.6
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 3.8e-127 458.8 340 65.0
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 6.5e-127 458.0 384 60.2
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 8.5e-127 457.6 346 64.7
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 7.2e-126 454.5 342 64.0
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.2e-125 453.8 343 62.7
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 1.6e-125 453.4 392 58.7
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 2.1e-125 453.0 344 64.5
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 6.1e-125 451.4 342 63.2
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 6.1e-125 451.4 344 67.2
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 5.1e-124 448.4 290 75.5
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.1e-123 447.2 339 64.0
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.5e-123 446.8 339 63.7
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 4.4e-123 445.3 337 64.7
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 4.8e-122 441.8 342 62.6
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 8.2e-122 441.0 344 63.7
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 1.4e-121 440.3 380 60.8
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 2.6e-120 436.0 347 61.4
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.7e-119 433.3 338 62.7
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 2.2e-119 433.0 338 62.4
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.9e-119 432.6 338 62.4
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.4e-118 430.3 351 58.4
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.9e-118 429.9 338 62.1
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 3.2e-118 429.1 338 61.8
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 2.1e-117 426.4 360 62.8
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.7e-117 425.2 338 61.8
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.8e-116 423.3 338 60.9
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 2.4e-113 412.9 340 59.4
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 3.5e-112 409.1 342 59.9
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 2.9e-111 406.0 334 58.4
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 2.7e-109 399.4 334 58.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 1.4e-108 397.1 440 48.4
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 9.7e-107 391.0 334 56.6
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 8.2e-106 387.9 267 69.7
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 8.2e-106 387.9 347 57.3
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 7.5e-99 364.8 346 54.9
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.7e-98 363.6 342 52.6
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.8e-93 346.3 292 60.6
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 2.3e-92 343.2 260 66.5
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 6.8e-92 341.7 260 66.2
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 6.6e-87 325.1 240 63.3
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 6.8e-84 315.1 185 77.3
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.6e-83 313.2 184 77.2
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 2.5e-78 296.6 346 42.8
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 5.6e-70 268.9 346 39.9
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.8e-68 263.8 345 41.7
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-59 234.2 217 56.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.5e-54 216.9 185 61.1
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.1e-49 201.4 171 64.3
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 6.0e-48 195.7 260 39.6
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 8.1e-45 185.3 201 49.3
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.4e-41 174.5 187 49.7
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 2.8e-37 160.2 179 49.2
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.6e-35 153.7 210 42.4
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 4.9e-26 122.9 81 70.4
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 7.9e-24 115.5 217 33.2
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 2.2e-18 97.4 128 38.3
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.4e-17 94.7 70 61.4
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.4e-17 94.7 70 61.4
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.4e-17 94.7 70 61.4
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 1.2e-16 91.7 70 60.0
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-14 84.7 172 36.6
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 3.7e-13 80.1 77 54.5
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 6.3e-13 79.3 76 51.3
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 6.3e-13 79.3 76 51.3
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.4e-12 78.2 77 53.2
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 5.3e-12 76.3 77 53.2
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.9e-10 70.5 61 57.4
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.2e-09 66.6 69 47.8
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 5.1e-07 59.7 60 46.7
SHI23126 Sapria himalayana HOM05D006263 ORTHO05D007549 2.0e-06 57.8 89 33.7


User provided reference genes

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