Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A355T38 Lonicera japonica HOM05D006462 ORTHO05D008067 1.1e-79 300.1 162 100.0
Dinv10269 Davidia involucrata HOM05D006462 ORTHO05D008067 1.4e-60 236.5 154 84.4
CSS0006730 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 6.0e-59 231.1 154 81.8
DCAR_004313 Daucus carota HOM05D006462 ORTHO05D008067 5.1e-58 228.0 154 82.5
Rhsim13G0127700 Rhododendron simsii HOM05D006462 ORTHO05D008067 6.7e-58 227.6 154 81.8
Cc09_g06660 Coffea canephora HOM05D006462 ORTHO05D008067 3.3e-57 225.3 154 78.6
ATR0763G016 Amborella trichopoda HOM05D006462 ORTHO05D008067 2.8e-56 222.2 155 76.8
MSTRG.14813 Avicennia marina HOM05D006462 ORTHO05D008067 8.2e-56 220.7 154 76.6
TAR627G0872 Trochodendron aralioides HOM05D006462 ORTHO05D008067 1.1e-55 220.3 154 79.2
Gorai.011G050700 Gossypium raimondii HOM05D006462 ORTHO05D008067 1.4e-55 219.9 154 77.3
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 1.4e-55 219.9 154 74.0
ECA232G4418 Erigeron canadensis HOM05D006462 ORTHO05D008067 1.8e-55 219.5 154 74.0
Lsat_1_v5_gn_8_117040 Lactuca sativa HOM05D006462 ORTHO05D008067 3.1e-55 218.8 154 76.6
Gohir.A10G046300 Gossypium hirsutum HOM05D006462 ORTHO05D008067 4.1e-55 218.4 154 76.6
QL03p039440 Quercus lobata HOM05D006462 ORTHO05D008067 4.1e-55 218.4 155 75.5
Eucgr.D01035 Eucalyptus grandis HOM05D006462 ORTHO05D008067 1.2e-54 216.9 154 76.0
SGA_v2.0_scaffold51G18669 Striga asiatica HOM05D006462 ORTHO05D008067 1.5e-54 216.5 154 76.0
Ciclev10015603m.g Citrus clementina HOM05D006462 ORTHO05D008067 2.0e-54 216.1 154 72.7
Gohir.D10G047600 Gossypium hirsutum HOM05D006462 ORTHO05D008067 2.0e-54 216.1 154 76.0
TWI73G0634 Tripterygium wilfordii HOM05D006462 ORTHO05D008067 2.6e-54 215.7 154 75.3
Duzib235G0723 Durio zibethinus HOM05D006462 ORTHO05D008067 3.4e-54 215.3 154 75.3
Hma1.2p1_0365F.1_g136800 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 5.9e-54 214.5 154 77.3
Migut.H01302 Erythranthe guttata HOM05D006462 ORTHO05D008067 7.6e-54 214.2 155 74.2
Glyma.09G021500 Glycine max HOM05D006462 ORTHO05D008067 1.3e-53 213.4 154 75.3
COL.COLO4_30938 Corchorus olitorius HOM05D006462 ORTHO05D008067 2.9e-53 212.2 154 74.0
Aqoxy4G00016 Aquilegia oxysepala HOM05D006462 ORTHO05D008067 5.0e-53 211.5 154 72.1
Cfa004797 Carpinus fangiana HOM05D006462 ORTHO05D008067 5.0e-53 211.5 154 76.0
Thecc.06G136400 Theobroma cacao HOM05D006462 ORTHO05D008067 5.0e-53 211.5 155 72.9
Sopen02g018560 Solanum pennellii HOM05D006462 ORTHO05D008067 1.1e-52 210.3 154 73.4
Lalb_Chr15g0088641 Lupinus albus HOM05D006462 ORTHO05D008067 1.4e-52 209.9 154 74.7
Nn7g38003 Nelumbo nucifera HOM05D006462 ORTHO05D008067 1.9e-52 209.5 155 73.5
SalBow7G1415 Salvia bowleyana HOM05D006462 ORTHO05D008067 2.5e-52 209.1 154 73.4
FAN21G3298 Fragaria x ananassa HOM05D006462 ORTHO05D008067 3.2e-52 208.8 154 72.7
MD10G1238000 Malus domestica HOM05D006462 ORTHO05D008067 3.2e-52 208.8 154 72.1
Sabra15G0134200 Salix brachista HOM05D006462 ORTHO05D008067 3.2e-52 208.8 154 74.7
Haze_10391 Corylus avellana HOM05D006462 ORTHO05D008067 4.2e-52 208.4 154 75.3
THA.LOC104812900 Tarenaya hassleriana HOM05D006462 ORTHO05D008067 5.5e-52 208.0 154 72.1
Glyma.15G127800 Glycine max HOM05D006462 ORTHO05D008067 7.2e-52 207.6 154 72.7
FAN25G3296 Fragaria x ananassa HOM05D006462 ORTHO05D008067 9.3e-52 207.2 154 71.4
Medtr2g029350 Medicago truncatula HOM05D006462 ORTHO05D008067 9.3e-52 207.2 154 74.0
Peaxi162Scf00195g00131 Petunia axillaris HOM05D006462 ORTHO05D008067 9.3e-52 207.2 154 71.4
CARHR177360 Cardamine hirsuta HOM05D006462 ORTHO05D008067 1.2e-51 206.8 154 70.8
Ca_00797_v3 Cicer arietinum L. HOM05D006462 ORTHO05D008067 1.2e-51 206.8 154 71.4
FAN16G0781 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.2e-51 206.8 154 72.7
PGSC0003DMG400021145 Solanum tuberosum HOM05D006462 ORTHO05D008067 1.6e-51 206.5 154 72.1
Solyc02g069410.4 Solanum lycopersicum HOM05D006462 ORTHO05D008067 2.1e-51 206.1 154 72.1
Potri.015G112500 Populus trichocarpa HOM05D006462 ORTHO05D008067 2.7e-51 205.7 154 74.0
CiPaw.09G151400 Carya illinoinensis HOM05D006462 ORTHO05D008067 3.5e-51 205.3 154 71.4
A06p46730 Brassica napus HOM05D006462 ORTHO05D008067 6.1e-51 204.5 154 70.1
BraA06t27545Z Brassica rapa HOM05D006462 ORTHO05D008067 6.1e-51 204.5 154 70.1
BcaC06g34485 Brassica carinata HOM05D006462 ORTHO05D008067 7.9e-51 204.1 154 69.5
C07p27950 Brassica napus HOM05D006462 ORTHO05D008067 7.9e-51 204.1 154 69.5
BolC7t43328H Brassica oleracea HOM05D006462 ORTHO05D008067 7.9e-51 204.1 154 69.5
Atru.chr10.574 Acer truncatum HOM05D006462 ORTHO05D008067 1.3e-50 203.4 154 72.1
VMungo0540G1781 Vigna mungo HOM05D006462 ORTHO05D008067 1.3e-50 203.4 154 71.4
BcaC06g31570 Brassica carinata HOM05D006462 ORTHO05D008067 1.8e-50 203.0 154 69.5
CAN.G675.12 Capsicum annuum HOM05D006462 ORTHO05D008067 1.8e-50 203.0 154 70.8
CANSAT35G0316 Cannabis sativa HOM05D006462 ORTHO05D008067 2.3e-50 202.6 154 71.4
arahy.Tifrunner.gnm1.ann1.CJL35W Arachis hypogaea HOM05D006462 ORTHO05D008067 3.0e-50 202.2 154 70.1
Thhalv10000927m.g Eutrema salsugineum HOM05D006462 ORTHO05D008067 3.0e-50 202.2 154 69.5
arahy.Tifrunner.gnm1.ann1.2J20F7 Arachis hypogaea HOM05D006462 ORTHO05D008067 3.9e-50 201.8 154 70.1
Phvul.006G130700 Phaseolus vulgaris HOM05D006462 ORTHO05D008067 3.9e-50 201.8 154 70.8
RcHm_v2.0_Chr5g0019301 Rosa chinensis HOM05D006462 ORTHO05D008067 5.1e-50 201.4 154 69.5
Sp2g09990 Schrenkiella parvula HOM05D006462 ORTHO05D008067 8.7e-50 200.7 154 69.5
AT5G45170 Arabidopsis thaliana HOM05D006462 ORTHO05D008067 1.1e-49 200.3 154 68.8
Nitab4.5_0005250g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 1.1e-49 200.3 154 71.4
Cpa.g.sc192.4 Carica papaya HOM05D006462 ORTHO05D008067 2.5e-49 199.1 154 68.8
AL8G14020 Arabidopsis lyrata HOM05D006462 ORTHO05D008067 3.3e-49 198.7 154 68.2
TPR.G26539 Trifolium pratense HOM05D006462 ORTHO05D008067 5.7e-49 198.0 154 70.1
Carub.0008s0300 Capsella rubella HOM05D006462 ORTHO05D008067 7.4e-49 197.6 154 68.2
PGR083G2188 Punica granatum HOM05D006462 ORTHO05D008067 7.4e-49 197.6 154 68.8
Zm00001eb032640 Zea mays HOM05D006462 ORTHO05D008067 7.4e-49 197.6 154 70.1
Sed0017395 Sechium edule HOM05D006462 ORTHO05D008067 9.7e-49 197.2 154 68.8
PSO675G5440 Papaver somniferum HOM05D006462 ORTHO05D008067 1.3e-48 196.8 154 68.2
PSO675G4077 Papaver somniferum HOM05D006462 ORTHO05D008067 2.4e-47 192.6 155 67.1
Lj6g0000446 Lotus japonicus HOM05D006462 ORTHO05D008067 5.3e-47 191.4 156 70.5
CsaV3_6G052750 Cucumis sativus L. HOM05D006462 ORTHO05D008067 1.5e-46 189.9 154 66.2
MELO3C007035.2 Cucumis melo HOM05D006462 ORTHO05D008067 2.0e-46 189.5 154 66.9
Os12g0630700 Oryza sativa ssp. japonica HOM05D006462 ORTHO05D008067 2.0e-46 189.5 154 69.5
Psat1g169320 Pisum sativum HOM05D006462 ORTHO05D008067 2.0e-46 189.5 154 65.6
ClCG01G025490 Citrullus lanatus HOM05D006462 ORTHO05D008067 4.5e-46 188.3 154 64.9
FvH4_3g11870 Fragaria vesca HOM05D006462 ORTHO05D008067 1.7e-45 186.4 154 67.5
Aa31LG9G7960 Aethionema arabicum HOM05D006462 ORTHO05D008067 3.8e-45 185.3 187 57.2
MD10G1237500 Malus domestica HOM05D006462 ORTHO05D008067 1.1e-44 183.7 154 63.0
MD10G1237600 Malus domestica HOM05D006462 ORTHO05D008067 1.1e-44 183.7 154 62.3
EL10Ac8g19520 Beta vulgaris HOM05D006462 ORTHO05D008067 4.2e-44 181.8 154 66.9
AUR62034022 Chenopodium quinoa HOM05D006462 ORTHO05D008067 1.6e-43 179.9 154 64.9
Hma1.2p1_0365F.1_g136810 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 1.0e-42 177.2 130 75.4
Nitab4.5_0011847g0040 Nicotiana tabacum HOM05D006462 ORTHO05D008067 2.3e-42 176.0 128 75.8
GSVIVG01001717001 Vitis vinifera HOM05D006462 ORTHO05D008067 5.1e-42 174.9 156 61.5
vmacro03491 Vaccinium macrocarpon HOM05D006462 ORTHO05D008067 4.3e-41 171.8 154 64.9
MBI18_g37401_MAGBIO Magnolia biondii HOM05D006462 ORTHO05D008067 6.3e-40 167.9 155 60.6
CSS0042902 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 2.4e-39 166.0 112 82.1
Mapoly0106s0006 Marchantia polymorpha HOM05D006462 ORTHO05D008067 3.1e-39 165.6 154 57.1
unitig_21.g20206 Utricularia gibba HOM05D006462 ORTHO05D008067 3.1e-39 165.6 154 57.1
AagrBONN_evm.TU.Sc2ySwM_117.1618 Anthoceros agrestis HOM05D006462 ORTHO05D008067 5.3e-39 164.9 154 54.5
SMO358G0034 Selaginella moellendorffii HOM05D006462 ORTHO05D008067 2.9e-37 159.1 164 54.3
Pp3c10_270 Physcomitrium patens HOM05D006462 ORTHO05D008067 2.7e-35 152.5 157 51.6
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.5e-33 146.7 155 53.5
SEGI_02488 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 1.7e-32 143.3 126 57.1
Sc16g0001760 Simmondsia chinensis HOM05D006462 ORTHO05D008067 4.4e-25 118.6 109 60.6
RcHm_v2.0_Chr5g0019341 Rosa chinensis HOM05D006462 ORTHO05D008067 3.7e-24 115.5 78 78.2
AUR62043004 Chenopodium quinoa HOM05D006462 ORTHO05D008067 2.0e-22 109.8 130 50.8
Manes.16G054132 Manihot esculenta HOM05D006462 ORTHO05D008067 6.5e-21 104.8 83 67.5
Prupe.4G106200 Prunus persica HOM05D006462 ORTHO05D008067 4.7e-19 98.6 78 66.7
CBR_g32011 Chara braunii HOM05D006462 ORTHO05D008067 3.1e-15 85.9 199 31.7
RcHm_v2.0_Chr5g0019331 Rosa chinensis HOM05D006462 ORTHO05D008067 3.1e-15 85.9 61 68.9
MD15G1410000 Malus domestica HOM05D006462 ORTHO05D008067 8.0e-11 71.2 54 64.8


User provided reference genes

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