Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A355G32 Lonicera japonica HOM05D006462 ORTHO05D008067 1.8e-87 325.9 160 100.0
Dinv10269 Davidia involucrata HOM05D006462 ORTHO05D008067 2.6e-54 215.7 183 60.1
Hma1.2p1_0365F.1_g136810 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 1.8e-47 193.0 185 56.2
Hma1.2p1_0365F.1_g136800 Hydrangea macrophylla HOM05D006462 ORTHO05D008067 4.0e-47 191.8 185 55.7
CSS0006730 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 6.8e-47 191.0 183 55.2
RcHm_v2.0_Chr5g0019301 Rosa chinensis HOM05D006462 ORTHO05D008067 5.8e-46 188.0 183 52.5
RcHm_v2.0_Chr5g0019331 Rosa chinensis HOM05D006462 ORTHO05D008067 1.9e-44 183.0 183 51.4
FvH4_3g11870 Fragaria vesca HOM05D006462 ORTHO05D008067 3.5e-43 178.7 184 51.1
COL.COLO4_30938 Corchorus olitorius HOM05D006462 ORTHO05D008067 7.8e-43 177.6 191 51.8
MD10G1238000 Malus domestica HOM05D006462 ORTHO05D008067 2.3e-42 176.0 191 49.7
Gorai.011G050700 Gossypium raimondii HOM05D006462 ORTHO05D008067 3.9e-42 175.3 188 53.2
FAN21G3298 Fragaria x ananassa HOM05D006462 ORTHO05D008067 1.9e-41 172.9 184 49.5
FAN16G0781 Fragaria x ananassa HOM05D006462 ORTHO05D008067 5.6e-41 171.4 184 49.5
Rhsim13G0127700 Rhododendron simsii HOM05D006462 ORTHO05D008067 5.6e-41 171.4 183 51.9
Ciclev10015603m.g Citrus clementina HOM05D006462 ORTHO05D008067 9.6e-41 170.6 182 52.7
Haze_10391 Corylus avellana HOM05D006462 ORTHO05D008067 1.2e-40 170.2 187 51.9
Cfa004797 Carpinus fangiana HOM05D006462 ORTHO05D008067 6.2e-40 167.9 187 50.8
Duzib235G0723 Durio zibethinus HOM05D006462 ORTHO05D008067 1.1e-39 167.2 186 51.1
QL03p039440 Quercus lobata HOM05D006462 ORTHO05D008067 1.4e-39 166.8 192 51.0
Atru.chr10.574 Acer truncatum HOM05D006462 ORTHO05D008067 3.1e-39 165.6 189 50.8
TWI73G0634 Tripterygium wilfordii HOM05D006462 ORTHO05D008067 1.2e-38 163.7 187 50.3
MD10G1237500 Malus domestica HOM05D006462 ORTHO05D008067 1.5e-38 163.3 188 46.3
CiPaw.09G151400 Carya illinoinensis HOM05D006462 ORTHO05D008067 2.6e-38 162.5 186 49.5
Manes.16G054132 Manihot esculenta HOM05D006462 ORTHO05D008067 4.4e-38 161.8 184 50.5
SGA_v2.0_scaffold51G18669 Striga asiatica HOM05D006462 ORTHO05D008067 4.4e-38 161.8 191 50.3
MD10G1237600 Malus domestica HOM05D006462 ORTHO05D008067 5.8e-38 161.4 191 46.1
Prupe.4G106200 Prunus persica HOM05D006462 ORTHO05D008067 1.3e-37 160.2 189 48.7
vmacro03491 Vaccinium macrocarpon HOM05D006462 ORTHO05D008067 1.7e-37 159.8 210 46.7
GSVIVG01001717001 Vitis vinifera HOM05D006462 ORTHO05D008067 3.8e-37 158.7 184 48.9
FAN25G3296 Fragaria x ananassa HOM05D006462 ORTHO05D008067 6.4e-37 157.9 155 52.3
MSTRG.14813 Avicennia marina HOM05D006462 ORTHO05D008067 1.6e-35 153.3 190 47.4
Nitab4.5_0011847g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 1.6e-35 153.3 185 49.7
Nitab4.5_0005250g0020 Nicotiana tabacum HOM05D006462 ORTHO05D008067 4.6e-35 151.8 185 49.7
Potri.015G112500 Populus trichocarpa HOM05D006462 ORTHO05D008067 6.0e-35 151.4 153 54.2
Cpa.g.sc192.4 Carica papaya HOM05D006462 ORTHO05D008067 1.3e-34 150.2 177 46.3
Cc09_g06660 Coffea canephora HOM05D006462 ORTHO05D008067 1.3e-34 150.2 186 47.3
Sabra15G0134200 Salix brachista HOM05D006462 ORTHO05D008067 1.3e-34 150.2 153 53.6
TAR627G0872 Trochodendron aralioides HOM05D006462 ORTHO05D008067 1.3e-34 150.2 204 44.6
Migut.H01302 Erythranthe guttata HOM05D006462 ORTHO05D008067 3.0e-34 149.1 187 46.5
Nn7g38003 Nelumbo nucifera HOM05D006462 ORTHO05D008067 5.1e-34 148.3 182 46.7
Sopen02g018560 Solanum pennellii HOM05D006462 ORTHO05D008067 5.1e-34 148.3 188 47.3
PGSC0003DMG400021145 Solanum tuberosum HOM05D006462 ORTHO05D008067 6.6e-34 147.9 188 47.9
Solyc02g069410.4 Solanum lycopersicum HOM05D006462 ORTHO05D008067 8.7e-34 147.5 188 47.3
CANSAT35G0316 Cannabis sativa HOM05D006462 ORTHO05D008067 1.1e-31 140.6 175 46.9
CAN.G675.12 Capsicum annuum HOM05D006462 ORTHO05D008067 2.0e-30 136.3 192 46.9
Eucgr.D01035 Eucalyptus grandis HOM05D006462 ORTHO05D008067 1.7e-29 133.3 187 42.2
CSS0015214 Camellia sinensis var. sinensis HOM05D006462 ORTHO05D008067 4.9e-29 131.7 90 70.0
Lsat_1_v5_gn_8_117040 Lactuca sativa HOM05D006462 ORTHO05D008067 4.9e-29 131.7 136 54.4
MELO3C007035.2 Cucumis melo HOM05D006462 ORTHO05D008067 8.4e-29 131.0 188 44.7
ECA232G4418 Erigeron canadensis HOM05D006462 ORTHO05D008067 2.4e-28 129.4 128 53.9
AL8G14020 Arabidopsis lyrata HOM05D006462 ORTHO05D008067 3.2e-28 129.0 190 41.1
CsaV3_6G052750 Cucumis sativus L. HOM05D006462 ORTHO05D008067 4.2e-28 128.6 190 42.1
PGR083G2188 Punica granatum HOM05D006462 ORTHO05D008067 4.2e-28 128.6 123 57.7
ClCG01G025490 Citrullus lanatus HOM05D006462 ORTHO05D008067 5.4e-28 128.3 171 45.6
PSO675G5440 Papaver somniferum HOM05D006462 ORTHO05D008067 7.1e-28 127.9 126 52.4
Phvul.006G130700 Phaseolus vulgaris HOM05D006462 ORTHO05D008067 1.2e-27 127.1 127 50.4
THA.LOC104812900 Tarenaya hassleriana HOM05D006462 ORTHO05D008067 1.2e-27 127.1 187 41.7
Aqoxy4G00016 Aquilegia oxysepala HOM05D006462 ORTHO05D008067 2.7e-27 125.9 107 59.8
Ca_00797_v3 Cicer arietinum L. HOM05D006462 ORTHO05D008067 2.7e-27 125.9 124 51.6
HanXRQChr04g0115281 Helianthus annuus HOM05D006462 ORTHO05D008067 4.6e-27 125.2 142 49.3
PSO675G4077 Papaver somniferum HOM05D006462 ORTHO05D008067 6.0e-27 124.8 129 51.9
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 6.0e-27 124.8 145 46.2
Sc16g0001760 Simmondsia chinensis HOM05D006462 ORTHO05D008067 1.0e-26 124.0 110 58.2
Lalb_Chr15g0088641 Lupinus albus HOM05D006462 ORTHO05D008067 1.8e-26 123.2 140 47.9
ATR0763G016 Amborella trichopoda HOM05D006462 ORTHO05D008067 2.3e-26 122.9 117 53.0
AT5G45170 Arabidopsis thaliana HOM05D006462 ORTHO05D008067 2.3e-26 122.9 187 39.6
SalBow7G1415 Salvia bowleyana HOM05D006462 ORTHO05D008067 2.3e-26 122.9 152 45.4
arahy.Tifrunner.gnm1.ann1.2J20F7 Arachis hypogaea HOM05D006462 ORTHO05D008067 3.0e-26 122.5 170 43.5
arahy.Tifrunner.gnm1.ann1.CJL35W Arachis hypogaea HOM05D006462 ORTHO05D008067 3.0e-26 122.5 170 43.5
Aa31LG9G7960 Aethionema arabicum HOM05D006462 ORTHO05D008067 3.9e-26 122.1 186 40.3
CARHR177360 Cardamine hirsuta HOM05D006462 ORTHO05D008067 3.9e-26 122.1 185 39.5
VMungo0540G1781 Vigna mungo HOM05D006462 ORTHO05D008067 3.9e-26 122.1 146 45.9
Sp2g09990 Schrenkiella parvula HOM05D006462 ORTHO05D008067 8.7e-26 120.9 188 41.5
Oeu052694.1 Olea europaea HOM05D006462 ORTHO05D008067 3.3e-25 119.0 128 53.9
EL10Ac8g19520 Beta vulgaris HOM05D006462 ORTHO05D008067 4.3e-25 118.6 139 47.5
Os12g0630700 Oryza sativa ssp. japonica HOM05D006462 ORTHO05D008067 2.1e-24 116.3 110 56.4
BcaC06g34485 Brassica carinata HOM05D006462 ORTHO05D008067 2.8e-24 115.9 130 46.2
BolC7t43328H Brassica oleracea HOM05D006462 ORTHO05D008067 2.8e-24 115.9 130 46.2
Carub.0008s0300 Capsella rubella HOM05D006462 ORTHO05D008067 3.7e-24 115.5 194 37.6
Thhalv10000927m.g Eutrema salsugineum HOM05D006462 ORTHO05D008067 4.8e-24 115.2 187 38.0
unitig_21.g20206 Utricularia gibba HOM05D006462 ORTHO05D008067 6.2e-24 114.8 128 50.8
Medtr2g029350 Medicago truncatula HOM05D006462 ORTHO05D008067 8.1e-24 114.4 169 41.4
BraA06t27545Z Brassica rapa HOM05D006462 ORTHO05D008067 1.8e-23 113.2 190 38.4
A06p46730 Brassica napus HOM05D006462 ORTHO05D008067 2.4e-23 112.8 130 46.2
C07p27950 Brassica napus HOM05D006462 ORTHO05D008067 2.4e-23 112.8 130 45.4
Glyma.09G021500 Glycine max HOM05D006462 ORTHO05D008067 2.4e-23 112.8 110 52.7
Lj6g0000446 Lotus japonicus HOM05D006462 ORTHO05D008067 4.0e-23 112.1 167 41.9
Glyma.15G127800 Glycine max HOM05D006462 ORTHO05D008067 2.0e-22 109.8 166 41.6
BcaC06g31570 Brassica carinata HOM05D006462 ORTHO05D008067 3.4e-22 109.0 187 36.9
DCAR_004313 Daucus carota HOM05D006462 ORTHO05D008067 4.5e-22 108.6 191 40.8
Psat1g169320 Pisum sativum HOM05D006462 ORTHO05D008067 1.3e-21 107.1 124 46.0
AagrBONN_evm.TU.Sc2ySwM_117.1618 Anthoceros agrestis HOM05D006462 ORTHO05D008067 3.0e-18 95.9 138 39.1
Pp3c10_270 Physcomitrium patens HOM05D006462 ORTHO05D008067 9.6e-17 90.9 117 40.2
AUR62043004 Chenopodium quinoa HOM05D006462 ORTHO05D008067 1.3e-16 90.5 124 41.9
SEGI_41218 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 2.4e-15 86.3 71 56.3
arahy.Tifrunner.gnm1.ann1.CQ0UNW Arachis hypogaea HOM05D000112 ORTHO05D008067 9.0e-15 84.3 71 60.6
SEGI_23737 Sequoiadendron giganteum HOM05D006462 ORTHO05D008067 1.5e-14 83.6 54 68.5
TPR.G26539 Trifolium pratense HOM05D006462 ORTHO05D008067 2.0e-14 83.2 54 66.7
CBR_g32011 Chara braunii HOM05D006462 ORTHO05D008067 7.6e-14 81.3 123 33.3
Gohir.A10G046300 Gossypium hirsutum HOM05D006462 ORTHO05D008067 8.4e-13 77.8 84 50.0
Gohir.D10G047600 Gossypium hirsutum HOM05D006462 ORTHO05D008067 8.4e-13 77.8 84 50.0
MBI18_g37401_MAGBIO Magnolia biondii HOM05D006462 ORTHO05D008067 2.5e-12 76.3 85 44.7
Peaxi162Scf00195g00131 Petunia axillaris HOM05D006462 ORTHO05D008067 4.2e-12 75.5 129 41.9
Thecc.06G136400 Theobroma cacao HOM05D006462 ORTHO05D008067 9.3e-12 74.3 83 49.4
Mapoly0106s0006 Marchantia polymorpha HOM05D006462 ORTHO05D008067 1.2e-11 73.9 97 40.2
Zm00001eb032640 Zea mays HOM05D006462 ORTHO05D008067 6.1e-11 71.6 82 46.3
MD10G1237800 Malus domestica HOM05D006462 ORTHO05D008067 1.6e-08 63.5 78 43.6
MCO09G072 Micromonas commoda HOM05D006462 ORTHO05D008067 3.1e-07 59.3 79 40.5
MBI18_g29620_MAGBIO Magnolia biondii HOM05D058980 ORTHO05D048595 4.1e-07 58.9 104 41.3


User provided reference genes

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