Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 8.8e-167 590.1 278 100.0
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 6.4e-117 424.5 282 71.3
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 1.1e-108 397.1 282 66.0
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 7.8e-107 391.0 281 66.2
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.5e-105 386.7 285 63.2
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.3e-105 385.6 285 63.2
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 2.3e-98 362.8 287 61.3
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 2.3e-98 362.8 282 61.0
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 1.9e-97 359.8 276 63.0
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.8e-95 353.2 272 62.1
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 3.1e-95 352.4 273 61.2
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 4.0e-95 352.1 286 59.8
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 2.6e-94 349.4 277 60.6
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 2.6e-94 349.4 280 60.4
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 2.9e-93 345.9 271 60.9
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 2.9e-93 345.9 273 60.1
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 3.8e-93 345.5 282 59.6
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 4.9e-93 345.1 280 58.9
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 3.2e-92 342.4 262 61.5
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 4.2e-92 342.0 277 57.4
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 1.2e-91 340.5 271 61.6
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 2.7e-91 339.3 276 59.1
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 2.3e-90 336.3 273 57.5
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 2.3e-90 336.3 273 58.2
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 3.9e-90 335.5 270 58.9
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 5.1e-90 335.1 273 59.0
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.1e-89 334.0 273 57.1
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 1.5e-89 333.6 271 57.6
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 1.9e-89 333.2 272 58.8
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 4.3e-89 332.0 272 59.9
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 7.4e-89 331.3 273 57.1
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 1.3e-88 330.5 276 57.6
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 1.6e-88 330.1 273 57.9
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 3.7e-88 328.9 274 57.3
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 2.4e-87 326.2 270 57.0
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 4.0e-87 325.5 273 57.5
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 6.9e-87 324.7 274 57.3
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 6.9e-87 324.7 271 57.6
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 9.0e-87 324.3 273 59.3
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 1.2e-86 323.9 281 56.6
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 1.5e-86 323.6 271 57.6
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 2.0e-86 323.2 271 56.8
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 2.0e-86 323.2 271 56.8
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 2.0e-86 323.2 271 56.8
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 1.1e-84 317.4 276 54.0
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 2.5e-84 316.2 267 55.4
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 3.2e-84 315.8 267 55.4
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 9.3e-84 314.3 273 55.3
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 2.7e-83 312.8 267 55.1
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 2.7e-83 312.8 269 55.4
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 1.8e-82 310.1 298 52.3
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 2.3e-82 309.7 277 52.3
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 3.9e-82 308.9 275 53.8
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 4.8e-80 302.0 272 54.4
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 6.2e-80 301.6 286 49.7
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.4e-79 300.4 280 51.8
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 9.0e-79 297.7 232 61.6
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 9.0e-79 297.7 226 62.8
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.6e-78 296.2 302 48.3
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 4.5e-78 295.4 280 50.7
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 1.1e-76 290.8 279 52.0
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 1.2e-75 287.3 288 50.0
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 1.3e-74 283.9 314 45.9
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 4.3e-73 278.9 224 56.7
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 9.7e-73 277.7 221 59.7
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 3.7e-72 275.8 271 50.9
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 8.2e-72 274.6 279 49.8
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 9.0e-71 271.2 277 48.0
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.5e-70 270.4 262 50.4
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 1.3e-69 267.3 182 65.9
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 3.2e-68 262.7 330 43.0
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 9.4e-68 261.2 262 49.6
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 1.0e-66 257.7 291 46.4
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 7.4e-65 251.5 275 47.6
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.4e-63 247.3 181 63.0
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 1.5e-62 243.8 231 52.4
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 3.2e-60 236.1 270 43.7
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 1.2e-59 234.2 234 47.4
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.5e-57 227.3 183 61.2
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 2.9e-53 213.0 247 44.9
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 8.0e-51 204.9 278 36.7
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 1.8e-50 203.8 178 56.2
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 7.4e-49 198.4 188 51.6
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 1.8e-47 193.7 167 58.7
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 9.1e-47 191.4 277 36.5
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 3.8e-45 186.0 134 57.5
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 2.5e-44 183.3 164 56.1
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.4e-42 177.6 133 57.9
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 4.5e-38 162.5 231 36.4
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 6.5e-37 158.7 117 58.1
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 3.2e-36 156.4 253 36.8
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 1.6e-35 154.1 279 31.2
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 2.8e-32 143.3 135 56.3
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 1.7e-29 134.0 82 76.8
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.2e-27 127.9 313 27.8
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 2.2e-24 117.1 130 48.5
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.6e-22 110.9 112 42.0
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 2.0e-22 110.5 60 83.3
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 7.8e-14 82.0 94 48.9
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 5.0e-13 79.3 167 31.1
TAR636G1493 Trochodendron aralioides HOM05D007318 ORTHO05D009289 2.8e-11 73.6 52 63.5
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 1.1e-10 71.6 130 37.7
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 2.9e-08 63.5 38 65.8
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 3.2e-07 60.1 166 23.5
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 5.4e-07 59.3 166 23.5
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 7.1e-07 58.9 39 59.0
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 2.7e-06 57.0 95 30.5
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 7.8e-06 55.5 90 33.3


User provided reference genes

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