Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A253T54 Lonicera japonica HOM05D001479 ORTHO05D001401 1.6e-33 145.6 77 100.0
AUR62007193 Chenopodium quinoa HOM05D001479 ORTHO05D001401 9.4e-10 66.6 81 58.0
AUR62018810 Chenopodium quinoa HOM05D001479 ORTHO05D001401 9.4e-10 66.6 81 58.0
Actinidia25922 Actinidia chinensis HOM05D001479 ORTHO05D001401 4.6e-09 64.3 70 64.3
Actinidia03413 Actinidia chinensis HOM05D001479 ORTHO05D001401 7.9e-09 63.5 70 62.9
Sc22g0001170 Simmondsia chinensis HOM05D001479 ORTHO05D001401 1.4e-08 62.8 81 56.8
Ah.07g199900 Amaranthus hybridus HOM05D001479 ORTHO05D001401 1.8e-08 62.4 73 58.9
Sc07g0009030 Simmondsia chinensis HOM05D001479 ORTHO05D001401 1.8e-08 62.4 45 80.0
CSS0032818 Camellia sinensis var. sinensis HOM05D001479 ORTHO05D001401 2.3e-08 62.0 71 62.0
CSS0033545 Camellia sinensis var. sinensis HOM05D001479 ORTHO05D001401 2.3e-08 62.0 71 62.0
MBI04_g46824_MAGBIO Magnolia biondii HOM05D001479 ORTHO05D001401 5.1e-08 60.8 69 56.5
Sc01g0007890 Simmondsia chinensis HOM05D001479 ORTHO05D001401 5.1e-08 60.8 75 54.7
EL10Ac5g12227 Beta vulgaris HOM05D001479 ORTHO05D001401 6.7e-08 60.5 79 57.0
Cpa.g.sc98.69 Carica papaya HOM05D001479 ORTHO05D001401 6.7e-08 60.5 67 56.7
Dinv25154 Davidia involucrata HOM05D001479 ORTHO05D001401 6.7e-08 60.5 73 60.3
MBI04_g20753_MAGBIO Magnolia biondii HOM05D001479 ORTHO05D001401 6.7e-08 60.5 66 57.6
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 6.7e-08 60.5 70 55.7
Ah.12g053850 Amaranthus hybridus HOM05D001479 ORTHO05D001401 8.8e-08 60.1 79 55.7
EL10Ac1g00732 Beta vulgaris HOM05D001479 ORTHO05D001401 1.1e-07 59.7 48 68.8
GSVIVG01013280001 Vitis vinifera HOM05D001479 ORTHO05D001401 2.0e-07 58.9 39 79.5
CiPaw.14G017900 Carya illinoinensis HOM05D001479 ORTHO05D001401 2.6e-07 58.5 72 52.8
Actinidia10867 Actinidia chinensis HOM05D001479 ORTHO05D001401 3.3e-07 58.2 68 60.3
Thecc.01G401000 Theobroma cacao HOM05D001479 ORTHO05D001401 3.3e-07 58.2 64 57.8
GSVIVG01018326001 Vitis vinifera HOM05D001479 ORTHO05D001401 5.7e-07 57.4 71 59.2
AUR62013773 Chenopodium quinoa HOM05D001479 ORTHO05D001401 7.4e-07 57.0 48 64.6
AUR62023383 Chenopodium quinoa HOM05D001479 ORTHO05D001401 7.4e-07 57.0 48 64.6
Aqoxy3G02603 Aquilegia oxysepala HOM05D001479 ORTHO05D001401 9.7e-07 56.6 58 62.1
COL.COLO4_12366 Corchorus olitorius HOM05D001479 ORTHO05D001401 9.7e-07 56.6 66 57.6
Duzib133G0611 Durio zibethinus HOM05D001479 ORTHO05D001401 9.7e-07 56.6 66 57.6
Cfa011037 Carpinus fangiana HOM05D001479 ORTHO05D001401 1.3e-06 56.2 73 52.1
Haze_02888 Corylus avellana HOM05D001479 ORTHO05D001401 1.3e-06 56.2 73 52.1
Atru.chr5.86 Acer truncatum HOM05D001479 ORTHO05D001401 1.7e-06 55.8 64 60.9
Hma1.2p1_0173F.1_g076380 Hydrangea macrophylla HOM05D001479 ORTHO05D001401 1.7e-06 55.8 70 54.3
RcHm_v2.0_Chr1g0344941 Rosa chinensis HOM05D001479 ORTHO05D001401 1.7e-06 55.8 65 55.4
Hund14469 Selenicereus undatus HOM05D001479 ORTHO05D001401 1.7e-06 55.8 76 56.6
CiPaw.13G023100 Carya illinoinensis HOM05D001479 ORTHO05D001401 2.2e-06 55.5 72 51.4
Aa31LG1G26240 Aethionema arabicum HOM05D001479 ORTHO05D001401 2.8e-06 55.1 61 60.7
Carub.0004s2723 Capsella rubella HOM05D001479 ORTHO05D001401 2.8e-06 55.1 57 61.4
Ciclev10021491m.g Citrus clementina HOM05D001479 ORTHO05D001401 2.8e-06 55.1 71 57.7
Duzib268G1211 Durio zibethinus HOM05D001479 ORTHO05D001401 2.8e-06 55.1 66 56.1
Nn6g33734 Nelumbo nucifera HOM05D001479 ORTHO05D001401 2.8e-06 55.1 70 55.7
TAR375G0966 Trochodendron aralioides HOM05D001479 ORTHO05D001401 2.8e-06 55.1 70 51.4
HPP92_003333 Vanilla planifolia HOM05D001479 ORTHO05D001401 2.8e-06 55.1 34 76.5
CANSAT25G2604 Cannabis sativa HOM05D001479 ORTHO05D001401 4.8e-06 54.3 62 64.5
Thhalv10001572m.g Eutrema salsugineum HOM05D001479 ORTHO05D001401 4.8e-06 54.3 61 60.7
Potri.014G052100 Populus trichocarpa HOM05D001479 ORTHO05D001401 4.8e-06 54.3 79 50.6
Prupe.2G119400 Prunus persica HOM05D001479 ORTHO05D001401 4.8e-06 54.3 60 56.7
Solyc06g061000.3 Solanum lycopersicum HOM05D001479 ORTHO05D001401 4.8e-06 54.3 68 55.9
Sopen06g021140 Solanum pennellii HOM05D001479 ORTHO05D001401 4.8e-06 54.3 68 55.9
THA.LOC104802504 Tarenaya hassleriana HOM05D001479 ORTHO05D001401 4.8e-06 54.3 63 58.7
Dinv43598 Davidia involucrata HOM05D001479 ORTHO05D001401 6.3e-06 53.9 66 53.0
MD07G1094900 Malus domestica HOM05D001479 ORTHO05D001401 6.3e-06 53.9 65 53.8
TAR374G0993 Trochodendron aralioides HOM05D001479 ORTHO05D001401 6.3e-06 53.9 70 51.4
Dinv44037 Davidia involucrata HOM05D001479 ORTHO05D001401 8.2e-06 53.5 45 73.3
Gorai.007G084900 Gossypium raimondii HOM05D001479 ORTHO05D001401 8.2e-06 53.5 66 53.0
vmacro00381 Vaccinium macrocarpon HOM05D001479 ORTHO05D001401 8.2e-06 53.5 49 71.4


User provided reference genes

Program Settings