Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 2.1e-174 615.5 302 100.0
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 2.7e-97 359.4 294 60.5
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.2e-87 327.4 293 56.3
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 5.7e-87 325.1 293 56.0
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 5.4e-85 318.5 291 54.0
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 2.7e-84 316.2 329 50.8
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 6.6e-83 311.6 293 54.9
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 8.6e-83 311.2 293 53.2
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 1.5e-79 300.4 293 51.9
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 7.5e-79 298.1 294 50.3
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 9.8e-79 297.7 289 52.6
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 8.3e-78 294.7 293 50.2
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 8.3e-78 294.7 294 49.7
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 5.4e-77 292.0 294 49.7
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 7.0e-77 291.6 291 50.5
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 1.6e-76 290.4 279 53.0
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 2.0e-76 290.0 295 48.8
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 4.6e-76 288.9 293 48.8
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.0e-75 287.7 288 48.3
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.9e-75 285.8 280 48.9
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 6.6e-75 285.0 290 49.7
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 1.1e-74 284.3 287 47.4
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 5.6e-74 282.0 294 50.0
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 4.7e-73 278.9 290 47.2
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 4.7e-73 278.9 294 48.6
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 4.7e-73 278.9 292 48.6
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.0e-72 277.7 292 47.3
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 1.0e-72 277.7 291 48.1
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 1.4e-72 277.3 296 49.0
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 8.9e-72 274.6 289 48.4
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 2.0e-71 273.5 275 51.6
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 2.6e-71 273.1 283 47.0
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 3.4e-71 272.7 289 48.4
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 4.4e-71 272.3 280 48.9
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 5.8e-71 271.9 290 47.9
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 9.8e-71 271.2 274 51.5
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 1.1e-69 267.7 249 51.8
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 1.1e-69 267.7 296 45.6
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 9.2e-69 264.6 292 46.6
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 7.8e-68 261.5 272 48.2
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.0e-67 261.2 292 46.2
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 1.0e-67 261.2 289 48.1
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.3e-67 260.8 277 47.7
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 3.0e-67 259.6 291 46.0
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 5.0e-67 258.8 291 48.1
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 1.5e-66 257.3 296 43.9
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 1.5e-66 257.3 291 44.7
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 4.3e-66 255.8 295 44.7
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 9.5e-66 254.6 276 50.7
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 2.1e-65 253.4 277 46.2
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 3.6e-65 252.7 272 48.9
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 8.1e-65 251.5 284 45.4
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 1.1e-64 251.1 292 44.2
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 1.4e-64 250.8 291 43.6
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 2.3e-64 250.0 294 44.6
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 3.1e-64 249.6 288 46.9
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 4.0e-64 249.2 293 43.7
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 5.2e-64 248.8 266 45.9
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 8.9e-64 248.1 275 43.3
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 2.0e-63 246.9 255 49.8
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 4.4e-63 245.7 291 43.6
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 7.1e-61 238.4 281 43.1
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.6e-60 237.3 258 47.3
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 1.3e-59 234.2 277 47.3
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 1.3e-59 234.2 291 43.0
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 1.7e-59 233.8 275 42.2
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 1.5e-58 230.7 280 43.9
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 7.3e-58 228.4 297 41.1
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 1.6e-57 227.3 273 44.7
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 2.8e-57 226.5 292 42.8
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.8e-57 226.5 301 41.9
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 4.7e-57 225.7 277 45.5
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 8.1e-57 224.9 288 42.0
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 1.1e-56 224.6 258 45.7
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 1.2e-55 221.1 275 43.3
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 1.2e-55 221.1 275 43.3
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.2e-55 221.1 309 41.1
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 2.6e-55 219.9 275 42.9
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 5.8e-55 218.8 275 42.5
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 3.7e-54 216.1 266 43.6
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 1.6e-52 210.7 246 44.7
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 2.7e-52 209.9 267 42.7
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 3.5e-52 209.5 267 40.4
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 6.0e-52 208.8 234 47.4
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 1.0e-51 208.0 289 40.5
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 1.3e-51 207.6 266 40.6
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 1.2e-49 201.1 245 43.7
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.1e-49 200.3 242 45.5
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 4.7e-49 199.1 276 40.2
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 2.4e-48 196.8 245 42.0
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 5.8e-47 192.2 391 32.2
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 3.3e-42 176.4 291 34.7
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 2.1e-41 173.7 187 46.5
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.9e-38 163.3 172 51.2
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 4.9e-38 162.5 245 39.2
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 1.0e-35 154.8 299 31.4
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 2.5e-34 150.2 138 44.9
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 1.6e-33 147.5 270 35.9
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 4.8e-33 146.0 184 39.7
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.6e-28 131.0 138 44.2
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 1.0e-27 128.3 108 51.9
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.8e-27 127.5 128 50.8
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.8e-25 120.2 107 47.7
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.2e-20 104.8 109 45.0
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 2.3e-19 100.5 180 30.0
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 2.5e-18 97.1 108 45.4
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.1e-17 94.0 85 47.1
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.8e-17 93.6 85 47.1
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 4.8e-17 92.8 92 43.5
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 4.1e-16 89.7 186 33.9
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 7.2e-13 79.0 70 47.1
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.1e-12 77.4 71 46.5
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 2.3e-11 73.9 119 31.1
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 1.3e-06 58.2 108 30.6
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 1.3e-06 58.2 48 52.1


User provided reference genes

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