Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 1.7e-61 239.2 124 100.0
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 8.5e-29 130.6 125 65.6
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 3.0e-26 122.1 130 61.5
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 5.7e-25 117.9 130 60.0
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 7.5e-25 117.5 125 62.4
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 1.7e-24 116.3 136 57.4
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 2.8e-24 115.5 132 59.8
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 3.7e-24 115.2 117 62.4
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 3.7e-24 115.2 125 61.6
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 4.8e-24 114.8 120 62.5
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 4.1e-23 111.7 146 52.1
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 2.9e-21 105.5 116 60.3
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 1.5e-20 103.2 136 55.1
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.9e-20 102.8 139 53.2
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 3.2e-20 102.1 127 54.3
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 7.2e-20 100.9 132 53.8
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 1.2e-19 100.1 119 58.8
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 1.6e-19 99.8 117 56.4
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.6e-19 99.8 116 58.6
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 4.7e-19 98.2 116 55.2
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 1.4e-18 96.7 169 45.0
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 5.2e-18 94.7 88 64.8
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 1.5e-17 93.2 106 61.3
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 2.0e-17 92.8 137 54.7
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 2.0e-17 92.8 90 63.3
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 7.5e-17 90.9 129 50.4
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 7.5e-17 90.9 129 50.4
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 9.8e-17 90.5 113 58.4
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 2.2e-16 89.4 104 54.8
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 8.3e-16 87.4 90 61.1
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.1e-15 87.0 82 58.5
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 1.4e-15 86.7 82 57.3
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 5.4e-15 84.7 117 54.7
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 9.1e-15 84.0 121 47.9
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.6e-14 83.2 115 49.6
Dinv28942 Davidia involucrata HOM05D007324 ORTHO05D007884 4.5e-14 81.6 124 49.2
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 4.5e-14 81.6 107 55.1
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 1.0e-13 80.5 114 51.8
Peaxi162Scf00460g00044 Petunia axillaris HOM05D007324 ORTHO05D007884 1.0e-13 80.5 121 49.6
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 1.3e-13 80.1 132 43.9
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 2.2e-13 79.3 114 50.0
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 2.9e-13 79.0 113 48.7
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 2.9e-13 79.0 117 51.3
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 6.5e-13 77.8 82 62.2
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 8.5e-13 77.4 121 50.4
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 1.1e-12 77.0 122 49.2
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.1e-12 77.0 127 46.5
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.5e-12 76.6 126 46.0
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 1.5e-12 76.6 125 47.2
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 1.5e-12 76.6 119 48.7
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 2.5e-12 75.9 115 47.8
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 3.2e-12 75.5 106 51.9
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 3.2e-12 75.5 106 51.9
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 4.2e-12 75.1 122 45.9
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 4.2e-12 75.1 125 47.2
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 5.5e-12 74.7 137 44.5
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 1.2e-11 73.6 104 49.0
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 2.7e-11 72.4 119 47.1
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 2.7e-11 72.4 74 59.5
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 8.0e-11 70.9 113 44.2
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 8.0e-11 70.9 121 45.5
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 1.4e-10 70.1 138 41.3
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 1.8e-10 69.7 97 51.5
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 1.8e-10 69.7 144 41.7
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 1.8e-10 69.7 96 51.0
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 2.3e-10 69.3 125 47.2
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 2.3e-10 69.3 125 47.2
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 3.0e-10 68.9 114 50.9
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 4.0e-10 68.6 128 47.7
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 6.8e-10 67.8 139 39.6
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 1.2e-09 67.0 127 40.9
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 1.2e-09 67.0 127 40.9
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 2.6e-09 65.9 126 45.2
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 2.6e-09 65.9 119 45.4
DCAR_008279 Daucus carota HOM05D007324 ORTHO05D007884 2.6e-09 65.9 120 44.2
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 3.4e-09 65.5 82 50.0
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 3.4e-09 65.5 94 50.0
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 4.4e-09 65.1 114 50.0
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 5.7e-09 64.7 94 50.0
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 6.3e-08 61.2 118 41.5
FAN08G0008 Fragaria x ananassa HOM05D007324 ORTHO05D007884 6.3e-08 61.2 94 47.9
Nitab4.5_0008428g0010 Nicotiana tabacum HOM05D007324 ORTHO05D007884 8.3e-08 60.8 128 42.2
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 1.4e-07 60.1 128 40.6
EL10Ac5g12140 Beta vulgaris HOM05D028673 ORTHO05D031676 7.0e-07 57.8 104 42.3
Aqoxy3G02405 Aquilegia oxysepala HOM05D007324 ORTHO05D007884 1.2e-06 57.0 57 63.2
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 1.6e-06 56.6 101 45.5
BcaB07g32955 Brassica carinata HOM05D007324 ORTHO05D007884 4.5e-06 55.1 115 42.6
Sp1g28340 Schrenkiella parvula HOM05D007324 ORTHO05D007884 4.5e-06 55.1 111 45.0


User provided reference genes

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