Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 7.5e-192 673.7 345 100.0
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.6e-109 399.1 327 66.1
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.5e-107 393.7 327 63.9
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 3.3e-107 392.5 326 64.1
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 5.3e-105 385.2 330 62.7
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.6e-104 383.6 327 61.8
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.7e-103 380.2 327 61.5
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 5.0e-103 378.6 327 60.9
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.5e-102 377.1 327 60.9
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.9e-102 376.7 327 61.5
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.2e-102 375.9 327 60.2
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 9.4e-102 374.4 327 60.6
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 9.4e-102 374.4 327 61.8
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 2.7e-101 372.9 327 60.9
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 3.6e-101 372.5 327 60.9
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.7e-101 372.1 327 60.9
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.0e-101 371.3 328 60.7
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.4e-100 370.5 327 60.6
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 1.8e-100 370.2 328 60.7
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.3e-100 369.8 327 60.6
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.0e-100 369.0 327 59.9
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 4.0e-100 369.0 327 61.5
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 6.7e-100 368.2 327 61.5
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 4.4e-99 365.5 329 62.3
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.4e-99 365.5 328 60.4
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 7.5e-99 364.8 327 60.6
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 2.2e-98 363.2 326 58.9
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.8e-98 362.8 343 58.9
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 3.7e-98 362.5 326 59.5
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 6.3e-98 361.7 327 59.9
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 3.1e-97 359.4 327 59.3
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 3.1e-97 359.4 327 59.3
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 5.3e-97 358.6 327 59.0
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.3e-97 358.6 344 57.3
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 5.3e-97 358.6 327 58.7
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 7.0e-97 358.2 326 59.5
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 7.0e-97 358.2 327 59.3
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 2.0e-96 356.7 331 57.1
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.5e-96 355.9 329 59.3
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 2.9e-95 352.8 327 57.5
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 2.9e-95 352.8 327 58.4
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 5.0e-95 352.1 326 58.3
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 5.0e-95 352.1 327 58.4
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.1e-94 350.9 327 58.7
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 1.9e-94 350.1 326 58.0
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.9e-94 350.1 327 56.6
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 2.5e-94 349.7 328 57.0
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 5.5e-94 348.6 326 57.1
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 7.2e-94 348.2 327 57.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 2.1e-93 346.7 327 56.3
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 3.6e-93 345.9 335 55.8
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 8.0e-93 344.7 329 57.4
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.4e-92 344.0 327 56.3
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 1.8e-92 343.6 327 57.5
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.3e-92 343.2 328 57.9
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 3.0e-92 342.8 328 56.7
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 8.8e-92 341.3 327 56.0
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 8.8e-92 341.3 327 56.0
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.2e-91 340.9 328 55.5
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.5e-91 340.5 327 56.0
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.5e-91 340.5 327 54.4
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 2.0e-91 340.1 327 55.7
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 2.6e-91 339.7 327 55.7
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 3.4e-91 339.3 329 55.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 4.4e-91 339.0 327 55.4
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 7.5e-91 338.2 327 55.4
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.3e-90 337.4 327 55.0
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.7e-90 337.0 327 55.0
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 2.2e-90 336.7 327 55.0
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 2.2e-90 336.7 327 55.0
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.8e-90 336.3 327 55.0
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 2.8e-90 336.3 327 55.4
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 4.8e-90 335.5 327 54.7
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 4.1e-89 332.4 327 54.7
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 4.1e-89 332.4 328 54.3
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 7.0e-89 331.6 327 54.7
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 7.0e-89 331.6 326 56.1
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 3.5e-88 329.3 328 54.9
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.0e-87 327.8 327 55.7
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 1.3e-87 327.4 328 54.6
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 1.3e-87 327.4 327 55.4
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 6.5e-87 325.1 326 55.2
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.5e-86 323.2 320 55.0
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 2.8e-85 319.7 330 53.6
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.7e-82 310.5 329 52.3
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 3.7e-82 309.3 327 53.8
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 6.3e-82 308.5 333 54.4
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.2e-80 304.3 328 53.4
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.2e-80 304.3 327 51.1
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 2.0e-80 303.5 294 55.8
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 5.9e-80 302.0 288 56.6
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 5.0e-79 298.9 326 52.8
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.9e-78 297.0 327 51.1
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 4.7e-77 292.4 335 46.9
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 8.0e-77 291.6 327 50.5
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 8.9e-76 288.1 270 57.8
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 5.4e-73 278.9 452 41.2
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 5.9e-72 275.4 313 50.5
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.4e-68 264.2 327 44.0
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 3.4e-67 259.6 327 46.2
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-64 251.1 335 48.4
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 8.9e-60 235.0 331 40.8
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 8.6e-55 218.4 154 68.8
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 2.8e-53 213.4 335 38.2
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 4.7e-53 212.6 335 38.5
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 4.7e-53 212.6 161 66.5
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 3.2e-49 199.9 337 34.4
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 5.4e-49 199.1 161 62.7
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 8.1e-45 185.3 129 68.2
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.4e-44 184.5 127 68.5
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 2.2e-42 177.2 129 65.9
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 4.9e-42 176.0 122 73.0
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.1e-38 164.9 122 68.0
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 6.0e-32 142.5 112 63.4
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.6e-27 127.1 101 63.4
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 9.9e-27 125.2 119 56.3
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 3.3e-22 110.2 117 53.8
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.9e-18 97.1 119 47.9
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 3.3e-14 83.6 63 61.9
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 2.8e-13 80.5 132 40.2
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 3.7e-13 80.1 119 42.9
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 3.6e-08 63.5 231 26.4
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 8.8e-07 58.9 99 40.4


User provided reference genes

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