Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 2.6e-237 825.1 439 100.0
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 1.2e-74 284.6 485 44.7
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 5.8e-64 249.2 288 54.5
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 9.9e-64 248.4 296 53.7
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 1.0e-60 238.4 471 42.3
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 1.4e-57 228.0 349 44.7
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 8.4e-55 218.8 453 37.1
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 6.9e-49 199.1 530 34.5
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 9.0e-49 198.7 288 44.4
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 7.6e-48 195.7 250 51.6
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 6.5e-47 192.6 286 42.7
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.2e-45 188.3 204 50.0
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 4.6e-45 186.4 341 38.4
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 1.5e-43 181.4 296 39.2
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 2.5e-43 180.6 249 49.4
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 4.3e-43 179.9 381 39.6
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 7.4e-43 179.1 351 37.6
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 4.1e-41 173.3 251 43.0
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 1.5e-40 171.4 425 37.9
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 2.6e-40 170.6 269 39.4
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 5.0e-39 166.4 299 39.8
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 8.4e-39 165.6 252 40.5
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.1e-38 165.2 262 40.8
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 2.5e-38 164.1 247 42.1
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 5.5e-38 162.9 262 41.6
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 5.5e-38 162.9 262 42.0
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 9.3e-38 162.2 269 39.0
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 1.2e-37 161.8 264 41.3
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 7.9e-37 159.1 246 40.7
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 7.9e-37 159.1 287 37.6
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 5.1e-36 156.4 157 55.4
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 6.7e-36 156.0 269 38.7
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 6.7e-36 156.0 262 39.3
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 1.1e-35 155.2 271 38.0
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 2.5e-35 154.1 275 36.7
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 3.3e-35 153.7 362 35.4
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 3.3e-35 153.7 268 38.1
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 4.3e-35 153.3 228 42.1
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 5.7e-35 152.9 269 38.3
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 7.4e-35 152.5 262 42.0
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 1.3e-34 151.8 406 33.7
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 1.6e-34 151.4 227 38.3
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 1.6e-34 151.4 359 34.0
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 2.8e-34 150.6 254 41.3
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 3.7e-34 150.2 242 40.1
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 3.7e-34 150.2 243 37.4
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 8.2e-34 149.1 467 30.6
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 1.4e-33 148.3 218 42.2
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 3.1e-33 147.1 227 37.4
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.1e-33 147.1 301 36.9
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.1e-33 147.1 236 39.4
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.1e-33 147.1 268 37.7
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.1e-33 146.7 237 40.1
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 2.6e-32 144.1 470 30.2
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 4.5e-32 143.3 236 39.0
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.0e-31 142.1 228 45.6
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.3e-31 141.7 268 36.9
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 1.3e-31 141.7 235 39.1
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 1.7e-31 141.4 201 42.3
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.9e-30 137.9 293 35.2
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 2.5e-30 137.5 265 36.2
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 4.6e-29 133.3 253 37.2
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 1.4e-28 131.7 264 34.1
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.0e-28 130.6 256 34.4
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 3.9e-28 130.2 304 35.2
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 3.9e-28 130.2 247 35.6
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 1.1e-27 128.6 275 33.8
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 1.1e-27 128.6 247 37.2
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 2.0e-27 127.9 293 31.7
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 2.5e-27 127.5 211 39.3
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 5.7e-27 126.3 222 39.2
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 1.3e-26 125.2 305 31.1
Thecc.03G251300 Theobroma cacao HOM05D006954 ORTHO05D008729 1.3e-26 125.2 140 49.3
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.7e-26 123.6 256 33.6
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 3.7e-26 123.6 304 33.6
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 6.3e-26 122.9 256 34.0
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.1e-25 122.1 256 33.6
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.8e-25 121.3 251 38.2
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 3.1e-25 120.6 245 35.9
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 3.1e-25 120.6 183 41.5
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 9.1e-25 119.0 221 36.2
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 1.3e-23 115.2 294 31.0
Nitab4.5_0001076g0060 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.7e-23 114.8 242 35.1
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 3.2e-22 110.5 221 35.7
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 6.1e-21 106.3 243 34.2
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 7.9e-21 105.9 195 36.9
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 6.7e-20 102.8 175 34.9
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 6.7e-20 102.8 276 30.8
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.0e-19 101.3 343 28.9
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 2.6e-19 100.9 264 31.8
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.6e-19 100.9 244 33.2
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 2.6e-19 100.9 292 33.2
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 3.3e-19 100.5 252 29.8
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 1.7e-18 98.2 257 33.5
PGSC0003DMG400011881 Solanum tuberosum HOM05D020458 ORTHO05D022160 1.7e-18 98.2 156 39.7
Solyc06g060730.3 Solanum lycopersicum HOM05D020458 ORTHO05D022160 2.2e-18 97.8 131 43.5
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 4.8e-18 96.7 304 31.2
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 4.8e-18 96.7 179 34.6
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 4.8e-18 96.7 179 34.6
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 6.3e-18 96.3 209 33.0
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 1.1e-17 95.5 219 32.9
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 1.8e-17 94.7 297 30.0
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 5.3e-17 93.2 399 30.8
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 7.7e-16 89.4 268 28.7
Sopen06g020850 Solanum pennellii HOM05D020458 ORTHO05D022160 1.0e-15 89.0 131 42.7
Lj9P565T15 Lonicera japonica HOM05D006954 ORTHO05D008729 4.2e-14 83.6 79 50.6
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 4.7e-13 80.1 303 28.4
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 6.1e-13 79.7 192 32.3
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 6.1e-13 79.7 154 34.4
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 2.3e-12 77.8 211 27.0
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 4.0e-12 77.0 299 26.8
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 6.7e-12 76.3 211 27.0
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 6.7e-12 76.3 292 27.7
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 1.1e-11 75.5 257 33.5
QL04p036188 Quercus lobata HOM05D006954 ORTHO05D008729 1.1e-11 75.5 233 30.5
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 5.7e-11 73.2 190 28.4
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 1.4e-09 68.6 170 27.1
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 3.1e-09 67.4 162 29.6
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 3.1e-09 67.4 153 32.7
Glyma.18G265000 Glycine max HOM05D005220 ORTHO05D006082 5.3e-09 66.6 156 29.5
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 5.3e-09 66.6 195 28.7
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 7.0e-09 66.2 171 27.5
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 7.0e-09 66.2 162 28.4
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 7.0e-09 66.2 173 27.7
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 7.0e-09 66.2 160 30.0
Potri.017G091700 Populus trichocarpa HOM05D005220 ORTHO05D006082 7.0e-09 66.2 160 30.6
AUR62008499 Chenopodium quinoa HOM05D005220 ORTHO05D006082 1.2e-08 65.5 212 27.4
Lj1g0008070 Lotus japonicus HOM05D005220 ORTHO05D006082 1.2e-08 65.5 154 28.6
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 2.7e-08 64.3 163 27.6
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 2.7e-08 64.3 152 28.9
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 2.7e-08 64.3 152 30.9
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 3.5e-08 63.9 160 29.4
Actinidia01983 Actinidia chinensis HOM05D005220 ORTHO05D006082 4.5e-08 63.5 174 28.2
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 4.5e-08 63.5 160 26.9
Actinidia07816 Actinidia chinensis HOM05D005220 ORTHO05D006082 5.9e-08 63.2 168 29.2
Lalb_Chr17g0337031 Lupinus albus HOM05D005220 ORTHO05D006082 5.9e-08 63.2 154 27.9
DCAR_011050 Daucus carota HOM05D005220 ORTHO05D006082 7.7e-08 62.8 203 23.6
Sc04g0003090 Simmondsia chinensis HOM05D005220 ORTHO05D006082 1.0e-07 62.4 164 29.9
AUR62021593 Chenopodium quinoa HOM05D005220 ORTHO05D006082 1.3e-07 62.0 218 26.1
Hund02604 Selenicereus undatus HOM05D005220 ORTHO05D006082 1.3e-07 62.0 274 23.7
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 1.7e-07 61.6 177 29.4
arahy.Tifrunner.gnm1.ann1.UWUI2N Arachis hypogaea HOM05D005220 ORTHO05D006082 2.2e-07 61.2 164 28.0
arahy.Tifrunner.gnm1.ann1.Y71GGS Arachis hypogaea HOM05D005220 ORTHO05D006082 2.2e-07 61.2 164 28.0
Dinv34960 Davidia involucrata HOM05D005220 ORTHO05D006082 3.8e-07 60.5 168 26.8
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 5.0e-07 60.1 208 29.8
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 5.0e-07 60.1 164 27.4
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 6.5e-07 59.7 160 28.8
TWI34G1812 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 6.5e-07 59.7 153 29.4
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 8.5e-07 59.3 162 26.5
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 1.1e-06 58.9 300 24.0
Lj1g0011465 Lotus japonicus HOM05D005220 ORTHO05D006082 1.1e-06 58.9 173 28.3
PGSC0003DMG400025138 Solanum tuberosum HOM05D005220 ORTHO05D006082 1.1e-06 58.9 244 28.3
ATR0681G067 Amborella trichopoda HOM05D005220 ORTHO05D006082 1.5e-06 58.5 164 27.4
Haze_14458 Corylus avellana HOM05D005220 ORTHO05D006082 1.5e-06 58.5 154 27.3
Manes.01G098100 Manihot esculenta HOM05D005220 ORTHO05D006082 1.5e-06 58.5 159 27.7
Peaxi162Scf00629g00420 Petunia axillaris HOM05D005220 ORTHO05D006082 1.5e-06 58.5 166 27.1
Rhsim10G0044300 Rhododendron simsii HOM05D005220 ORTHO05D006082 1.9e-06 58.2 151 27.2
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 2.5e-06 57.8 158 27.8
Aqoxy3G03583 Aquilegia oxysepala HOM05D005220 ORTHO05D006082 3.2e-06 57.4 215 23.3
Eucgr.I01975 Eucalyptus grandis HOM05D005220 ORTHO05D006082 3.2e-06 57.4 152 26.3
GSVIVG01007924001 Vitis vinifera HOM05D005220 ORTHO05D006082 3.2e-06 57.4 167 26.9
TWI60G0661 Tripterygium wilfordii HOM05D005220 ORTHO05D006082 4.2e-06 57.0 167 25.7
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 5.5e-06 56.6 153 26.8
Thecc.03G097300 Theobroma cacao HOM05D005220 ORTHO05D006082 5.5e-06 56.6 196 26.5
SEGI_37162 Sequoiadendron giganteum HOM05D015783 ORTHO05D021004 9.4e-06 55.8 159 27.7


User provided reference genes

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