Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A212T45 Lonicera japonica HOM05D007929 ORTHO05D008690 7.9e-291 1003.0 504 100.0
Dinv39112 Davidia involucrata HOM05D007929 ORTHO05D008690 1.5e-87 327.8 670 36.1
Dinv21608 Davidia involucrata HOM05D007929 ORTHO05D008690 3.3e-87 326.6 654 36.7
Actinidia05192 Actinidia chinensis HOM05D007929 ORTHO05D008690 6.3e-54 216.1 610 31.3
Rhsim07G0105500 Rhododendron simsii HOM05D007929 ORTHO05D008690 2.2e-51 207.6 662 30.1
Actinidia27458 Actinidia chinensis HOM05D007929 ORTHO05D008690 7.2e-50 202.6 642 30.1
CiPaw.12G107500 Carya illinoinensis HOM05D007929 ORTHO05D008690 1.6e-49 201.4 648 28.9
vmacro14098 Vaccinium macrocarpon HOM05D007929 ORTHO05D008690 1.6e-49 201.4 626 30.7
QL12p013187 Quercus lobata HOM05D007929 ORTHO05D008690 2.2e-46 191.0 648 29.0
GSVIVG01004789001 Vitis vinifera HOM05D007929 ORTHO05D008690 1.3e-43 181.8 620 29.8
Nn1g01073 Nelumbo nucifera HOM05D007929 ORTHO05D008690 3.8e-43 180.3 743 27.6
Manes.02G036501 Manihot esculenta HOM05D007929 ORTHO05D008690 5.5e-42 176.4 582 28.5
Ciclev10019204m.g Citrus clementina HOM05D007929 ORTHO05D008690 1.2e-41 175.3 588 29.4
Manes.01G077200 Manihot esculenta HOM05D007929 ORTHO05D008690 2.7e-41 174.1 622 28.3
Thecc.03G256000 Theobroma cacao HOM05D007929 ORTHO05D008690 4.7e-41 173.3 645 27.8
TAR374G1634 Trochodendron aralioides HOM05D007929 ORTHO05D008690 7.9e-41 172.6 707 27.0
Prupe.5G074300 Prunus persica HOM05D007929 ORTHO05D008690 1.5e-39 168.3 633 30.0
Cfa021312 Carpinus fangiana HOM05D007929 ORTHO05D008690 1.7e-38 164.9 644 28.1
Oeu029333.1 Olea europaea HOM05D007929 ORTHO05D008690 2.0e-36 157.9 577 29.3
Duzib084G1023 Durio zibethinus HOM05D007929 ORTHO05D008690 3.4e-36 157.1 661 26.6
Duzib205G1039 Durio zibethinus HOM05D007929 ORTHO05D008690 6.5e-35 152.9 668 26.8
Sed0000260 Sechium edule HOM05D007929 ORTHO05D008690 1.2e-33 148.7 555 29.4
COL.COLO4_37202 Corchorus olitorius HOM05D007929 ORTHO05D008690 1.6e-33 148.3 640 28.4
FvH4_5g00200 Fragaria vesca HOM05D007929 ORTHO05D008690 1.0e-32 145.6 561 28.3
RcHm_v2.0_Chr7g0202661 Rosa chinensis HOM05D007929 ORTHO05D008690 2.3e-32 144.4 559 28.6
DCAR_027794 Daucus carota HOM05D007929 ORTHO05D008690 3.0e-32 144.1 592 28.0
FAN18G3609 Fragaria x ananassa HOM05D007929 ORTHO05D008690 3.0e-32 144.1 561 28.2
FAN08G2103 Fragaria x ananassa HOM05D007929 ORTHO05D008690 3.9e-32 143.7 565 27.1
ClCG01G003880 Citrullus lanatus HOM05D007929 ORTHO05D008690 5.2e-32 143.3 545 27.3
Potri.001G121200 Populus trichocarpa HOM05D007929 ORTHO05D008690 6.7e-32 142.9 657 26.9
TAR375G1016 Trochodendron aralioides HOM05D007929 ORTHO05D008690 8.8e-32 142.5 241 39.0
Potri.003G112000 Populus trichocarpa HOM05D007929 ORTHO05D008690 2.2e-30 137.9 652 27.3
TWI60G0818 Tripterygium wilfordii HOM05D007929 ORTHO05D008690 2.8e-30 137.5 623 26.6
Gohir.A08G171000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 6.3e-30 136.3 668 25.7
FAN13G1817 Fragaria x ananassa HOM05D007929 ORTHO05D008690 4.1e-29 133.7 560 27.5
Gohir.A12G219000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 5.3e-29 133.3 661 24.2
Gorai.008G237100 Gossypium raimondii HOM05D007929 ORTHO05D008690 5.3e-29 133.3 667 24.0
MD04G1085400 Malus domestica HOM05D007929 ORTHO05D008690 5.3e-29 133.3 588 27.9
Sabra01G0093400 Salix brachista HOM05D007929 ORTHO05D008690 1.6e-28 131.7 644 25.9
Gohir.D08G189300 Gossypium hirsutum HOM05D007929 ORTHO05D008690 3.5e-28 130.6 669 26.0
Nn6g34027 Nelumbo nucifera HOM05D007929 ORTHO05D008690 1.1e-26 125.6 252 34.9
FAN04G0968 Fragaria x ananassa HOM05D007929 ORTHO05D008690 2.5e-26 124.4 598 26.1
Gorai.004G199400 Gossypium raimondii HOM05D007929 ORTHO05D008690 3.2e-26 124.0 669 25.9
MSTRG.25535 Avicennia marina HOM05D007929 ORTHO05D008690 9.4e-26 122.5 627 26.5
Sabra03G0077700 Salix brachista HOM05D007929 ORTHO05D008690 1.2e-25 122.1 653 25.7
CsaV3_5G004010 Cucumis sativus L. HOM05D007929 ORTHO05D008690 8.0e-25 119.4 556 25.4
MELO3C005557.2 Cucumis melo HOM05D007929 ORTHO05D008690 1.0e-24 119.0 559 25.2
Duzib068G0525 Durio zibethinus HOM05D007929 ORTHO05D008690 5.2e-24 116.7 662 25.2
MD06G1062900 Malus domestica HOM05D007929 ORTHO05D008690 5.7e-23 113.2 600 26.2
MBI04_g37591_MAGBIO Magnolia biondii HOM05D007929 ORTHO05D008690 1.8e-21 108.2 237 32.9
Peaxi162Scf00002g00920 Petunia axillaris HOM05D007929 ORTHO05D008690 3.1e-21 107.5 660 25.8
CAN.G1217.13 Capsicum annuum HOM05D007929 ORTHO05D008690 5.3e-21 106.7 640 25.8
Nitab4.5_0000993g0050 Nicotiana tabacum HOM05D007929 ORTHO05D008690 7.7e-20 102.8 656 23.5
Hund14599 Selenicereus undatus HOM05D007929 ORTHO05D008690 1.0e-19 102.4 615 25.7
Nitab4.5_0009716g0010 Nicotiana tabacum HOM05D007929 ORTHO05D008690 6.5e-19 99.8 624 23.9
CSS0014793 Camellia sinensis var. sinensis HOM05D007929 ORTHO05D008690 8.5e-19 99.4 94 52.1
ECA233G5449 Erigeron canadensis HOM05D007929 ORTHO05D008690 1.6e-17 95.1 477 27.9
Gohir.D12G221300 Gossypium hirsutum HOM05D007929 ORTHO05D008690 4.7e-17 93.6 667 21.7
Haze_07866 Corylus avellana HOM05D007929 ORTHO05D008690 1.8e-16 91.7 632 23.7
HanXRQChr13g0394961 Helianthus annuus HOM05D007929 ORTHO05D008690 3.0e-16 90.9 450 28.0
Sopen08g027490 Solanum pennellii HOM05D007929 ORTHO05D008690 1.3e-14 85.5 611 23.7
Cc08_g12850 Coffea canephora HOM05D007929 ORTHO05D008690 3.7e-14 84.0 580 23.3
Sc22g0000740 Simmondsia chinensis HOM05D007929 ORTHO05D008690 3.7e-14 84.0 505 25.7
AUR62007484 Chenopodium quinoa HOM05D007929 ORTHO05D008690 1.4e-13 82.0 642 24.1
GSVIVG01001285001 Vitis vinifera HOM05D007929 ORTHO05D008690 5.0e-11 73.6 272 29.8
CDE12G0741 Ceratophyllum demersum HOM05D038938 ORTHO05D008690 6.6e-11 73.2 101 41.6
Hma1.2p1_1720F.1_g299295 Hydrangea macrophylla HOM05D007929 ORTHO05D008690 2.5e-10 71.2 137 38.0
TAR375G0024 Trochodendron aralioides HOM05D007929 ORTHO05D008690 2.5e-10 71.2 85 43.5
MBI19_g16681_MAGBIO Magnolia biondii HOM05D001536 ORTHO05D001442 4.2e-10 70.5 229 28.8
Hma1.2p1_1720F.1_g299300 Hydrangea macrophylla HOM05D007929 ORTHO05D008690 5.5e-10 70.1 137 38.0
PGSC0003DMG400004743 Solanum tuberosum HOM05D007929 ORTHO05D008690 5.5e-10 70.1 335 26.6
Eucgr.E00452 Eucalyptus grandis HOM05D007929 ORTHO05D008690 2.1e-09 68.2 629 22.7
ATR0111G010 Amborella trichopoda HOM05D001536 ORTHO05D001442 2.8e-09 67.8 260 27.3
AUR62039940 Chenopodium quinoa HOM05D007929 ORTHO05D008690 8.0e-09 66.2 106 40.6
Migut.A00812 Erythranthe guttata HOM05D007929 ORTHO05D008690 8.0e-09 66.2 477 25.6
Nn3g17370 Nelumbo nucifera HOM05D001536 ORTHO05D001442 8.0e-09 66.2 109 40.4
Lsat_1_v5_gn_6_1860 Lactuca sativa HOM05D007929 ORTHO05D008690 5.2e-08 63.5 92 47.8
PGSC0003DMG402028385 Solanum tuberosum HOM05D001536 ORTHO05D001442 5.2e-08 63.5 219 27.4
EL10Ac5g13019 Beta vulgaris HOM05D007929 ORTHO05D008690 6.8e-08 63.2 598 24.6
CAN.G1340.15 Capsicum annuum HOM05D001536 ORTHO05D001442 8.9e-08 62.8 257 26.1
Aa31LG7G8470 Aethionema arabicum HOM05D001536 ORTHO05D001442 1.2e-07 62.4 218 26.6
PGSC0003DMG401028385 Solanum tuberosum HOM05D001536 ORTHO05D001442 1.2e-07 62.4 195 31.3
CDE12G0643 Ceratophyllum demersum HOM05D038938 ORTHO05D008690 1.5e-07 62.0 53 56.6
Nn4g23320 Nelumbo nucifera HOM05D001536 ORTHO05D001442 1.5e-07 62.0 146 37.7
CDE07G1318 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 2.0e-07 61.6 187 28.3
CDE04G1433 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 2.6e-07 61.2 108 38.9
Solyc05g012650.4 Solanum lycopersicum HOM05D001536 ORTHO05D001442 2.6e-07 61.2 197 28.9
GSVIVG01012173001 Vitis vinifera HOM05D001536 ORTHO05D001442 2.6e-07 61.2 240 28.8
Cc11_g12410 Coffea canephora HOM05D001536 ORTHO05D001442 3.4e-07 60.8 303 26.1
RcHm_v2.0_Chr7g0182271 Rosa chinensis HOM05D001536 ORTHO05D001442 4.4e-07 60.5 97 36.1
Solyc08g079030.4 Solanum lycopersicum HOM05D007929 ORTHO05D008690 4.4e-07 60.5 330 26.7
TAR629G1896 Trochodendron aralioides HOM05D001536 ORTHO05D001442 4.4e-07 60.5 203 28.1
CSS0031318 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.7e-07 60.1 155 32.9
CSS0031748 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 5.7e-07 60.1 155 32.9
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 5.7e-07 60.1 195 30.3
Peaxi162Scf00364g00128 Petunia axillaris HOM05D001536 ORTHO05D001442 5.7e-07 60.1 194 31.4
Sopen05g007470 Solanum pennellii HOM05D001536 ORTHO05D001442 5.7e-07 60.1 195 30.8
Sopen05g007480 Solanum pennellii HOM05D001536 ORTHO05D001442 5.7e-07 60.1 197 28.4
TAR371G0889 Trochodendron aralioides HOM05D001536 ORTHO05D001442 5.7e-07 60.1 210 31.4
Prupe.1G281700 Prunus persica HOM05D001536 ORTHO05D001442 7.5e-07 59.7 221 28.5
PGR102G1162 Punica granatum HOM05D001536 ORTHO05D001442 7.5e-07 59.7 154 33.1
A07p35660 Brassica napus HOM05D001536 ORTHO05D001442 9.8e-07 59.3 123 34.1
BraA07t31154Z Brassica rapa HOM05D001536 ORTHO05D001442 9.8e-07 59.3 123 34.1
PSO063G5967 Papaver somniferum HOM05D007665 ORTHO05D008293 1.3e-06 58.9 90 41.1
Solyc05g012640.3 Solanum lycopersicum HOM05D001536 ORTHO05D001442 1.3e-06 58.9 195 30.8
TAR374G1508 Trochodendron aralioides HOM05D001536 ORTHO05D001442 1.3e-06 58.9 146 33.6
Thhalv10018101m.g Eutrema salsugineum HOM05D001536 ORTHO05D001442 1.7e-06 58.5 125 36.0
Psat2g128440 Pisum sativum HOM05D001536 ORTHO05D001442 2.2e-06 58.2 180 29.4
HPP92_001620 Vanilla planifolia HOM05D001536 ORTHO05D001442 2.8e-06 57.8 98 35.7
Aqoxy3G03549 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 3.7e-06 57.4 107 37.4
arahy.Tifrunner.gnm1.ann1.I4K7T0 Arachis hypogaea HOM05D001536 ORTHO05D001442 4.9e-06 57.0 166 25.3
EL10Ac5g11082 Beta vulgaris HOM05D001536 ORTHO05D001442 4.9e-06 57.0 158 33.5
Rhsim08G0149900 Rhododendron simsii HOM05D001536 ORTHO05D001442 4.9e-06 57.0 127 35.4
Hund05858 Selenicereus undatus HOM05D001536 ORTHO05D001442 4.9e-06 57.0 166 29.5
ATR0030G044 Amborella trichopoda HOM05D004032 ORTHO05D004462 6.3e-06 56.6 151 28.5
HanXRQChr08g0211011 Helianthus annuus HOM05D001536 ORTHO05D001442 6.3e-06 56.6 144 29.9
SEGI_07957 Sequoiadendron giganteum HOM05D001536 ORTHO05D001442 6.3e-06 56.6 99 36.4
Sopen04g001520 Solanum pennellii HOM05D001536 ORTHO05D001442 6.3e-06 56.6 208 29.8
Aa31LG4G11510 Aethionema arabicum HOM05D001536 ORTHO05D001442 8.3e-06 56.2 172 30.2
EL10Ac6g15646 Beta vulgaris HOM05D004032 ORTHO05D004462 8.3e-06 56.2 164 24.4
TAR622G0794 Trochodendron aralioides HOM05D001536 ORTHO05D001442 8.3e-06 56.2 149 36.9


User provided reference genes

Program Settings