Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.7e-106 389.4 208 100.0
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.3e-61 238.0 211 66.4
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.3e-61 238.0 211 66.4
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 2.4e-60 236.1 208 63.0
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 3.1e-60 235.7 205 64.4
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 5.4e-60 235.0 156 73.1
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 5.4e-60 235.0 198 65.2
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 5.4e-60 235.0 155 76.1
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 5.4e-60 235.0 202 62.9
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 9.2e-60 234.2 156 73.1
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 9.2e-60 234.2 156 72.4
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.6e-59 233.4 149 77.2
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 3.5e-59 232.3 155 76.1
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 5.9e-59 231.5 147 76.9
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 2.9e-58 229.2 140 79.3
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 2.9e-58 229.2 144 75.7
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 7.3e-57 224.6 209 60.8
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.2e-56 223.8 196 64.3
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 3.6e-56 222.2 137 80.3
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 8.0e-56 221.1 159 72.3
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 8.0e-56 221.1 143 76.9
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.8e-55 219.9 208 60.6
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.8e-55 219.9 207 61.8
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 2.3e-55 219.5 148 73.6
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 2.3e-55 219.5 204 62.3
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 3.1e-55 219.2 205 60.0
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 3.1e-55 219.2 148 73.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 3.1e-55 219.2 140 76.4
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 4.0e-55 218.8 139 78.4
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 5.2e-55 218.4 208 57.2
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 2.6e-54 216.1 147 71.4
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 3.4e-54 215.7 148 71.6
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.3e-53 213.8 147 74.1
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 2.2e-53 213.0 141 75.9
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.9e-53 212.6 207 58.5
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 2.9e-53 212.6 140 75.7
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 4.9e-53 211.8 143 73.4
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 6.4e-53 211.5 157 70.7
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.1e-52 210.7 139 75.5
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 7.0e-52 208.0 149 70.5
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.2e-51 207.2 140 72.1
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.0e-50 204.1 137 73.7
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.3e-50 203.8 141 73.0
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 2.3e-50 203.0 148 70.9
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 3.0e-50 202.6 157 70.1
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 5.0e-50 201.8 138 71.7
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 6.6e-50 201.4 159 66.0
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.5e-49 199.5 123 78.0
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 3.3e-49 199.1 154 65.6
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 4.3e-49 198.7 147 72.1
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 4.3e-49 198.7 147 69.4
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.2e-48 197.2 176 59.7
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.2e-48 197.2 114 84.2
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.1e-48 196.4 126 73.0
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.8e-48 196.1 176 59.1
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.4e-47 193.7 139 69.8
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.8e-47 193.4 114 81.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 6.8e-47 191.4 142 65.5
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 6.8e-47 191.4 140 69.3
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 6.8e-47 191.4 123 75.6
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.0e-46 189.9 126 73.8
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 2.0e-46 189.9 124 78.2
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 3.4e-46 189.1 124 72.6
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 4.4e-46 188.7 126 73.0
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.1e-44 184.1 148 65.5
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 3.2e-44 182.6 140 66.4
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 4.1e-44 182.2 126 71.4
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 4.1e-44 182.2 125 71.2
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 4.1e-44 182.2 126 71.4
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 4.1e-44 182.2 125 71.2
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 4.1e-44 182.2 126 71.4
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 5.4e-44 181.8 140 67.1
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 5.4e-44 181.8 156 61.5
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 7.0e-44 181.4 151 64.2
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 9.2e-44 181.0 139 68.3
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 9.2e-44 181.0 126 70.6
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.7e-43 179.5 139 69.1
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 4.6e-43 178.7 151 63.6
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 6.0e-43 178.3 125 69.6
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 1.0e-42 177.6 135 69.6
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 2.3e-42 176.4 124 69.4
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 3.9e-42 175.6 146 63.0
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 6.6e-42 174.9 140 65.0
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 8.6e-42 174.5 183 54.6
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 8.6e-42 174.5 183 54.6
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 8.6e-42 174.5 159 59.1
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.6e-40 169.1 162 59.9
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 8.1e-40 167.9 121 71.9
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.4e-39 167.2 151 61.6
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 1.4e-39 167.2 204 51.5
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.1e-36 157.5 127 64.6
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 1.6e-32 143.7 151 56.3
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 3.4e-30 136.0 138 50.0
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 3.8e-29 132.5 123 53.7
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 4.9e-29 132.1 129 53.5
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 2.4e-28 129.8 82 73.2
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 5.4e-28 128.6 82 73.2
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 2.1e-27 126.7 118 54.2
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 4.6e-27 125.6 304 31.6
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.3e-25 118.2 84 71.4
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.1e-24 116.7 84 70.2
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 6.4e-21 105.1 80 66.2
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.1e-12 77.8 53 69.8
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.6e-11 72.4 52 67.3
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 7.6e-06 55.1 47 57.4


User provided reference genes

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