Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A137T29 Lonicera japonica HOM05D005004 ORTHO05D006097 2.1e-100 369.0 181 100.0
DCAR_009165 Daucus carota HOM05D005004 ORTHO05D006097 1.6e-31 140.2 83 83.1
Rhsim03G0075200 Rhododendron simsii HOM05D005004 ORTHO05D006097 1.6e-31 140.2 85 84.7
CSS0031559 Camellia sinensis var. sinensis HOM05D005004 ORTHO05D006097 2.0e-31 139.8 84 83.3
unitig_899.g15202 Utricularia gibba HOM05D005004 ORTHO05D006097 1.3e-30 137.1 84 81.0
Nitab4.5_0000368g0180 Nicotiana tabacum HOM05D005004 ORTHO05D006097 1.7e-30 136.7 84 79.8
Dinv31686 Davidia involucrata HOM05D005004 ORTHO05D006097 2.3e-30 136.3 85 82.4
Nitab4.5_0003512g0070 Nicotiana tabacum HOM05D005004 ORTHO05D006097 2.3e-30 136.3 84 79.8
Nitab4.5_0004873g0070 Nicotiana tabacum HOM05D005004 ORTHO05D006097 2.3e-30 136.3 127 58.3
Peaxi162Scf00673g00319 Petunia axillaris HOM05D005004 ORTHO05D006097 2.3e-30 136.3 82 79.3
Actinidia05431 Actinidia chinensis HOM05D005004 ORTHO05D006097 5.0e-30 135.2 83 83.1
EL10Ac7g16917 Beta vulgaris HOM05D005004 ORTHO05D006097 5.0e-30 135.2 84 78.6
Migut.L01778 Erythranthe guttata HOM05D005004 ORTHO05D006097 5.0e-30 135.2 82 80.5
CAN.G1715.5 Capsicum annuum HOM05D005004 ORTHO05D006097 1.1e-29 134.0 82 79.3
SalBow5G1155 Salvia bowleyana HOM05D005004 ORTHO05D006097 1.1e-29 134.0 82 79.3
Actinidia07927 Actinidia chinensis HOM05D005004 ORTHO05D006097 1.9e-29 133.3 84 79.8
SGA_v2.0_scaffold184G39963 Striga asiatica HOM05D005004 ORTHO05D006097 1.9e-29 133.3 84 77.4
Cc06_g05740 Coffea canephora HOM05D005004 ORTHO05D006097 2.5e-29 132.9 82 79.3
Solyc01g100410.3 Solanum lycopersicum HOM05D005004 ORTHO05D006097 2.5e-29 132.9 82 78.0
Sopen01g043930 Solanum pennellii HOM05D005004 ORTHO05D006097 2.5e-29 132.9 82 78.0
PGSC0003DMG403002803 Solanum tuberosum HOM05D005004 ORTHO05D006097 2.5e-29 132.9 82 78.0
HanXRQChr15g0491011 Helianthus annuus HOM05D005004 ORTHO05D006097 3.3e-29 132.5 81 80.2
HanXRQChr17g0554781 Helianthus annuus HOM05D005004 ORTHO05D006097 3.3e-29 132.5 81 80.2
Hma1.2p1_0580F.1_g182880 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 3.3e-29 132.5 84 82.1
SGA_v2.0_scaffold35G14070 Striga asiatica HOM05D005004 ORTHO05D006097 3.3e-29 132.5 89 76.4
MSTRG.10365 Avicennia marina HOM05D005004 ORTHO05D006097 4.3e-29 132.1 82 80.5
CAN.G1164.37 Capsicum annuum HOM05D005004 ORTHO05D006097 4.3e-29 132.1 81 80.2
Prupe.5G046500 Prunus persica HOM05D005004 ORTHO05D006097 4.3e-29 132.1 81 80.2
Ah.15g090870 Amaranthus hybridus HOM05D004140 ORTHO05D006116 5.6e-29 131.7 83 80.7
CSS0009320 Camellia sinensis var. sinensis HOM05D005004 ORTHO05D006097 5.6e-29 131.7 82 81.7
Hund03985 Selenicereus undatus HOM05D005004 ORTHO05D006097 5.6e-29 131.7 82 79.3
vmacro07408 Vaccinium macrocarpon HOM05D005004 ORTHO05D006097 5.6e-29 131.7 80 82.5
TAR369G1152 Trochodendron aralioides HOM05D005004 ORTHO05D006097 9.5e-29 131.0 101 69.3
GSVIVG01033842001 Vitis vinifera HOM05D005004 ORTHO05D006097 9.5e-29 131.0 84 78.6
Hma1.2p1_0232F.1_g097910 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 1.2e-28 130.6 83 81.9
Dinv21208 Davidia involucrata HOM05D005004 ORTHO05D006097 1.6e-28 130.2 83 80.7
TAR365G0253 Trochodendron aralioides HOM05D005004 ORTHO05D006097 1.6e-28 130.2 84 78.6
MD16G1269100 Malus domestica HOM05D005004 ORTHO05D006097 2.1e-28 129.8 81 80.2
CDE02G2337 Ceratophyllum demersum HOM05D005004 ORTHO05D006097 4.7e-28 128.6 84 79.8
ECA236G3187 Erigeron canadensis HOM05D005004 ORTHO05D006097 6.2e-28 128.3 78 82.1
MD06G1040300 Malus domestica HOM05D005004 ORTHO05D006097 6.2e-28 128.3 81 79.0
TAR623G0616 Trochodendron aralioides HOM05D005004 ORTHO05D006097 8.0e-28 127.9 84 79.8
Sc20g0006290 Simmondsia chinensis HOM05D005004 ORTHO05D006097 1.8e-27 126.7 81 79.0
THA.LOC104826944 Tarenaya hassleriana HOM05D005004 ORTHO05D006097 1.8e-27 126.7 83 78.3
Nn6g34902 Nelumbo nucifera HOM05D005004 ORTHO05D006097 2.3e-27 126.3 83 79.5
MBI17_g08354_MAGBIO Magnolia biondii HOM05D005004 ORTHO05D006097 3.1e-27 125.9 83 78.3
AUR62006181 Chenopodium quinoa HOM05D005004 ORTHO05D006097 5.2e-27 125.2 82 74.4
Aqoxy5G00209 Aquilegia oxysepala HOM05D005004 ORTHO05D006097 6.8e-27 124.8 85 76.5
Cpa.g.sc5.20 Carica papaya HOM05D005004 ORTHO05D006097 8.9e-27 124.4 83 75.9
AUR62028526 Chenopodium quinoa HOM05D005004 ORTHO05D006097 8.9e-27 124.4 79 77.2
FvH4_6g18690 Fragaria vesca HOM05D005004 ORTHO05D006097 8.9e-27 124.4 82 76.8
FAN05G0382 Fragaria x ananassa HOM05D005004 ORTHO05D006097 8.9e-27 124.4 82 76.8
FAN05G5799 Fragaria x ananassa HOM05D005004 ORTHO05D006097 8.9e-27 124.4 82 76.8
FAN09G0264 Fragaria x ananassa HOM05D005004 ORTHO05D006097 8.9e-27 124.4 82 76.8
FAN14G5527 Fragaria x ananassa HOM05D005004 ORTHO05D006097 8.9e-27 124.4 82 76.8
RcHm_v2.0_Chr3g0473661 Rosa chinensis HOM05D005004 ORTHO05D006097 8.9e-27 124.4 82 75.6
Eucgr.K02041 Eucalyptus grandis HOM05D005004 ORTHO05D006097 2.0e-26 123.2 85 75.3
Eucgr.L03536 Eucalyptus grandis HOM05D005004 ORTHO05D006097 2.0e-26 123.2 85 75.3
Duzib093G1830 Durio zibethinus HOM05D005004 ORTHO05D006097 2.6e-26 122.9 84 75.0
FAN02G1574 Fragaria x ananassa HOM05D005004 ORTHO05D006097 2.6e-26 122.9 82 75.6
Eucgr.C01891 Eucalyptus grandis HOM05D005004 ORTHO05D006097 3.4e-26 122.5 83 75.9
Thecc.05G089000 Theobroma cacao HOM05D005004 ORTHO05D006097 3.4e-26 122.5 83 77.1
Aa31LG1G21370 Aethionema arabicum HOM05D005004 ORTHO05D006097 4.4e-26 122.1 83 73.5
CiPaw.09G013900 Carya illinoinensis HOM05D005004 ORTHO05D006097 5.8e-26 121.7 81 77.8
CDE04G1264 Ceratophyllum demersum HOM05D005004 ORTHO05D006097 5.8e-26 121.7 84 77.4
Os08g0369700 Oryza sativa ssp. japonica HOM05D005004 ORTHO05D006097 5.8e-26 121.7 84 72.6
Cfa016606 Carpinus fangiana HOM05D005004 ORTHO05D006097 7.5e-26 121.3 81 77.8
QL07p038766 Quercus lobata HOM05D005004 ORTHO05D006097 7.5e-26 121.3 83 74.7
QL07p039017 Quercus lobata HOM05D005004 ORTHO05D006097 7.5e-26 121.3 83 74.7
TWI53G1915 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 7.5e-26 121.3 83 75.9
Zm00001eb170730 Zea mays HOM05D005004 ORTHO05D006097 7.5e-26 121.3 81 76.5
Sed0018976 Sechium edule HOM05D005004 ORTHO05D006097 9.8e-26 120.9 82 79.3
SalBow5G4790 Salvia bowleyana HOM05D005004 ORTHO05D006097 1.3e-25 120.6 76 78.9
A10p32210 Brassica napus HOM05D005004 ORTHO05D006097 1.7e-25 120.2 81 74.1
BraA10t45264Z Brassica rapa HOM05D005004 ORTHO05D006097 1.7e-25 120.2 81 74.1
Thhalv10014896m.g Eutrema salsugineum HOM05D005004 ORTHO05D006097 1.7e-25 120.2 81 74.1
Gohir.A01G138100 Gossypium hirsutum HOM05D005004 ORTHO05D006097 1.7e-25 120.2 83 77.1
ATR0174G014 Amborella trichopoda HOM05D005004 ORTHO05D006097 2.2e-25 119.8 83 74.7
arahy.Tifrunner.gnm1.ann1.8NC760 Arachis hypogaea HOM05D005004 ORTHO05D006097 2.9e-25 119.4 85 70.6
Haze_19610 Corylus avellana HOM05D005004 ORTHO05D006097 2.9e-25 119.4 83 74.7
Gorai.002G158400 Gossypium raimondii HOM05D005004 ORTHO05D006097 2.9e-25 119.4 82 76.8
TWI77G0413 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 2.9e-25 119.4 83 74.7
Medtr7g104600 Medicago truncatula HOM05D005004 ORTHO05D006097 3.7e-25 119.0 83 72.3
PGR142G4351 Punica granatum HOM05D005004 ORTHO05D006097 3.7e-25 119.0 85 72.9
Atru.chr8.1540 Acer truncatum HOM05D005004 ORTHO05D006097 4.9e-25 118.6 82 72.0
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 4.9e-25 118.6 79 74.7
Gohir.A01G206300 Gossypium hirsutum HOM05D005004 ORTHO05D006097 4.9e-25 118.6 83 73.5
AL6G13490 Arabidopsis lyrata HOM05D005004 ORTHO05D006097 6.4e-25 118.2 81 71.6
Carub.0006s0286 Capsella rubella HOM05D005004 ORTHO05D006097 6.4e-25 118.2 81 71.6
COL.COLO4_29735 Corchorus olitorius HOM05D005004 ORTHO05D006097 6.4e-25 118.2 83 73.5
CsaV3_1G033770 Cucumis sativus L. HOM05D005004 ORTHO05D006097 6.4e-25 118.2 84 72.6
Sp6g38820 Schrenkiella parvula HOM05D005004 ORTHO05D006097 6.4e-25 118.2 83 69.9
Glyma.13G153600 Glycine max HOM05D005004 ORTHO05D006097 8.3e-25 117.9 83 72.3
Gohir.D01G127800 Gossypium hirsutum HOM05D005004 ORTHO05D006097 8.3e-25 117.9 82 75.6
HPP92_018556 Vanilla planifolia HOM05D005004 ORTHO05D006097 8.3e-25 117.9 83 71.1
BcaC06g32094 Brassica carinata HOM05D005004 ORTHO05D006097 1.1e-24 117.5 81 72.8
C09p73010 Brassica napus HOM05D005004 ORTHO05D006097 1.1e-24 117.5 81 72.8
BolC9t60036H Brassica oleracea HOM05D005004 ORTHO05D006097 1.1e-24 117.5 81 72.8
MELO3C020686.2 Cucumis melo HOM05D005004 ORTHO05D006097 1.1e-24 117.5 84 72.6
TPR.G30035 Trifolium pratense HOM05D005004 ORTHO05D006097 1.1e-24 117.5 83 73.5
Duzib106G1905 Durio zibethinus HOM05D005004 ORTHO05D006097 1.4e-24 117.1 83 73.5
Gohir.D01G195700 Gossypium hirsutum HOM05D005004 ORTHO05D006097 1.4e-24 117.1 83 72.3
Gorai.002G239900 Gossypium raimondii HOM05D005004 ORTHO05D006097 1.4e-24 117.1 83 72.3
Psat3g033320 Pisum sativum HOM05D005004 ORTHO05D006097 1.4e-24 117.1 83 69.9
C02p01610 Brassica napus HOM05D005004 ORTHO05D006097 1.9e-24 116.7 81 71.6
BolC2t06126H Brassica oleracea HOM05D005004 ORTHO05D006097 1.9e-24 116.7 81 71.6
CANSAT80G1737 Cannabis sativa HOM05D005004 ORTHO05D006097 1.9e-24 116.7 84 71.4
BcaC03g12976 Brassica carinata HOM05D005004 ORTHO05D006097 2.4e-24 116.3 81 71.6
Lj1g0017616 Lotus japonicus HOM05D005004 ORTHO05D006097 2.4e-24 116.3 83 72.3
BraA02t04792Z Brassica rapa HOM05D005004 ORTHO05D006097 3.2e-24 115.9 81 71.6
CARHR209350 Cardamine hirsuta HOM05D005004 ORTHO05D006097 3.2e-24 115.9 81 71.6
Lalb_Chr20g0111711 Lupinus albus HOM05D005004 ORTHO05D006097 3.2e-24 115.9 85 68.2
AT5G03905 Arabidopsis thaliana HOM05D005004 ORTHO05D006097 4.1e-24 115.5 81 69.1
BcaB05g21795 Brassica carinata HOM05D005004 ORTHO05D006097 4.1e-24 115.5 81 70.4
ClCG03G002740 Citrullus lanatus HOM05D005004 ORTHO05D006097 4.1e-24 115.5 81 74.1
Ciclev10012954m.g Citrus clementina HOM05D005004 ORTHO05D006097 4.1e-24 115.5 86 70.9
Potri.006G084300 Populus trichocarpa HOM05D005004 ORTHO05D006097 4.1e-24 115.5 83 72.3
CsaV3_1G013480 Cucumis sativus L. HOM05D005004 ORTHO05D006097 7.0e-24 114.8 81 75.3
Phvul.003G095500 Phaseolus vulgaris HOM05D005004 ORTHO05D006097 9.2e-24 114.4 81 70.4
SEGI_14769 Sequoiadendron giganteum HOM05D005004 ORTHO05D006097 9.2e-24 114.4 85 67.1
VMungo1215G1361 Vigna mungo HOM05D005004 ORTHO05D006097 9.2e-24 114.4 81 69.1
Sabra06G0064000 Salix brachista HOM05D005004 ORTHO05D006097 1.2e-23 114.0 83 71.1
Sed0022281 Sechium edule HOM05D005004 ORTHO05D006097 1.6e-23 113.6 81 74.1
Lalb_Chr25g0288321 Lupinus albus HOM05D005004 ORTHO05D006097 2.1e-23 113.2 85 68.2
PSO339G3768 Papaver somniferum HOM05D005004 ORTHO05D006097 2.1e-23 113.2 81 71.6
PSO384G4260 Papaver somniferum HOM05D005004 ORTHO05D006097 2.1e-23 113.2 81 71.6
Lj1g0020740 Lotus japonicus HOM05D005004 ORTHO05D006097 3.5e-23 112.5 84 70.2
Manes.08G025200 Manihot esculenta HOM05D005004 ORTHO05D006097 6.0e-23 111.7 83 72.3
Hma1.2p1_3639F.1_g337130 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 7.8e-23 111.3 90 70.0
ClCG03G001800 Citrullus lanatus HOM05D005004 ORTHO05D006097 1.3e-22 110.5 95 65.3
arahy.Tifrunner.gnm1.ann1.E5K2FZ Arachis hypogaea HOM05D005004 ORTHO05D006097 2.3e-22 109.8 94 62.8
Zm00001eb042730 Zea mays HOM05D005004 ORTHO05D006097 1.5e-21 107.1 68 76.5
SMO171G0092 Selaginella moellendorffii HOM05D005004 ORTHO05D006097 1.9e-21 106.7 78 60.3
Lsat_1_v5_gn_8_77061 Lactuca sativa HOM05D004768 ORTHO05D005812 7.3e-21 104.8 68 75.0
Pp3c3_34710 Physcomitrium patens HOM05D005004 ORTHO05D006097 7.3e-21 104.8 81 64.2
Mapoly0089s0053 Marchantia polymorpha HOM05D005004 ORTHO05D006097 1.2e-20 104.0 86 58.1
AagrBONN_evm.TU.Sc2ySwM_228.4176 Anthoceros agrestis HOM05D005004 ORTHO05D006097 2.1e-20 103.2 83 56.6
CBR_g27757 Chara braunii HOM05D005004 ORTHO05D006097 2.8e-20 102.8 87 59.8
Aa31LG3G2670 Aethionema arabicum HOM05D005004 ORTHO05D006097 4.7e-20 102.1 81 61.7
Os08g0363800 Oryza sativa ssp. japonica HOM05D005004 ORTHO05D006097 1.1e-19 100.9 64 75.0
MCO02G129 Micromonas commoda HOM05D005004 ORTHO05D006097 4.9e-17 92.0 81 50.6
Glyma.03G195800 Glycine max HOM05D005004 ORTHO05D006097 9.6e-13 77.8 78 57.7
Cre07.g349600 Chlamydomonas reinhardtii HOM05D005004 ORTHO05D006097 2.1e-12 76.6 85 42.4
vmacro08717 Vaccinium macrocarpon HOM05D005004 ORTHO05D006097 2.1e-12 76.6 50 74.0
Hma1.2p1_0235F.1_g098620 Hydrangea macrophylla HOM05D005004 ORTHO05D012020 2.4e-11 73.2 101 50.5
Cc06_g20090 Coffea canephora HOM05D005004 ORTHO05D006097 5.2e-11 72.0 40 87.5
MSTRG.5844 Avicennia marina HOM05D005004 ORTHO05D006097 6.8e-11 71.6 46 73.9
Hma1.2p1_0160F.1_g071250 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 2.0e-10 70.1 49 73.5
PRCOL_00000026 Prasinoderma coloniale HOM05D005004 ORTHO05D006097 9.9e-10 67.8 105 38.1
Haze_27657 Corylus avellana HOM05D005004 ORTHO05D006097 1.4e-08 63.9 72 41.7
Pp3s30_920 Physcomitrium patens HOM05D002293 ORTHO05D006850 3.5e-07 59.3 80 37.5
SMO144G0175 Selaginella moellendorffii HOM05D002293 ORTHO05D006850 5.1e-06 55.5 81 35.8
AUR62003296 Chenopodium quinoa HOM05D002293 ORTHO05D006850 8.7e-06 54.7 81 35.8
AUR62027166 Chenopodium quinoa HOM05D002293 ORTHO05D006850 8.7e-06 54.7 81 35.8


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