Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 2.3e-243 845.1 430 100.0
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 5.0e-68 262.7 480 40.4
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 7.9e-66 255.4 508 38.8
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 8.0e-50 202.2 488 35.2
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 6.8e-49 199.1 504 33.9
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.7e-47 193.4 495 35.8
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 3.5e-45 186.8 472 36.4
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.3e-44 184.9 473 36.6
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 4.7e-42 176.4 501 32.5
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 6.1e-42 176.0 489 33.7
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.0e-41 175.3 497 33.8
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.4e-41 174.9 476 33.6
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 2.3e-41 174.1 494 33.2
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 9.8e-40 168.7 360 38.9
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.2e-39 167.5 492 33.5
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 6.3e-39 166.0 495 32.9
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.3e-39 165.6 488 32.8
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.1e-38 163.7 396 35.6
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 3.1e-38 163.7 400 34.8
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.1e-38 163.3 498 32.7
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 4.1e-38 163.3 480 33.8
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 5.4e-38 162.9 498 32.5
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.4e-38 162.9 498 32.7
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 3.5e-37 160.2 499 33.1
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 5.9e-37 159.5 394 35.5
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 5.9e-37 159.5 450 37.8
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 7.2e-35 152.5 489 32.5
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.5e-35 152.1 529 31.0
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.6e-34 151.4 444 35.6
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.8e-34 150.6 486 32.3
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 8.9e-33 145.6 388 37.9
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.6e-32 144.1 490 31.8
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 4.4e-32 143.3 400 36.2
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 4.9e-31 139.8 385 36.4
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 1.4e-30 138.3 466 33.3
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 3.5e-29 133.7 401 32.7
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.6e-29 133.3 488 31.6
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.0e-28 132.1 471 31.4
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 8.6e-28 129.0 490 30.4
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.6e-26 124.8 337 33.8
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 2.1e-26 124.4 485 30.9
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 2.3e-25 120.9 478 30.3
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 5.2e-25 119.8 478 29.9
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 1.5e-24 118.2 479 28.6
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.0e-24 117.9 344 32.6
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 5.8e-24 116.3 301 34.9
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 9.8e-24 115.5 477 30.6
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 3.7e-23 113.6 309 31.7
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 4.9e-23 113.2 300 34.0
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.1e-22 112.1 478 30.5
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 3.2e-22 110.5 407 29.2
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 4.1e-22 110.2 467 29.6
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 2.0e-21 107.8 454 30.4
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 4.6e-21 106.7 358 31.0
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 7.8e-21 105.9 457 30.0
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 7.8e-21 105.9 483 28.4
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 6.6e-20 102.8 435 31.5
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 4.3e-19 100.1 483 27.5
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 5.6e-19 99.8 346 31.8
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 7.3e-19 99.4 465 27.5
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 9.5e-19 99.0 496 28.6
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 3.6e-18 97.1 494 28.1
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 3.6e-18 97.1 423 28.6
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 6.2e-18 96.3 481 28.1
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 8.1e-18 95.9 197 35.5
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.1e-17 95.5 379 29.3
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 1.4e-17 95.1 473 30.4
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 1.8e-17 94.7 456 28.7
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 6.8e-17 92.8 475 28.0
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 8.9e-17 92.4 500 27.4
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 2.6e-16 90.9 361 31.0
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 9.8e-16 89.0 463 28.1
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 3.7e-15 87.0 377 28.9
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 3.7e-15 87.0 359 31.2
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 6.4e-15 86.3 457 27.1
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 8.3e-15 85.9 241 32.0
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 5.4e-14 83.2 384 30.5
Actinidia02438 Actinidia chinensis HOM05D005512 ORTHO05D006716 9.2e-14 82.4 214 32.7
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 1.6e-13 81.6 371 27.5
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 1.6e-13 81.6 298 29.9
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 3.5e-13 80.5 469 26.2
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 4.6e-13 80.1 380 27.4
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 7.8e-13 79.3 355 29.6
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 7.8e-13 79.3 355 29.6
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.3e-12 78.6 370 28.4
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.7e-12 78.2 390 27.7
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.3e-12 77.8 343 31.2
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 3.9e-12 77.0 323 28.2
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 1.5e-11 75.1 384 28.1
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 4.3e-11 73.6 408 26.7
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.2e-10 72.0 334 29.0
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.6e-10 70.5 258 31.4
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 6.2e-10 69.7 484 25.8
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 5.2e-09 66.6 301 28.6
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 3.4e-08 63.9 312 26.9
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 1.7e-07 61.6 253 28.9
QL07p039646 Quercus lobata HOM05D005512 ORTHO05D006716 1.7e-07 61.6 277 26.7
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 2.9e-07 60.8 367 28.6
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 4.9e-07 60.1 213 28.6
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 8.4e-07 59.3 450 24.2
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.1e-06 58.9 202 31.7
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 1.9e-06 58.2 315 26.0
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 2.4e-06 57.8 341 28.4


User provided reference genes

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