Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1234T114 Lonicera japonica HOM05D009884 ORTHO05D012165 9.5e-115 416.8 199 100.0
Lj2A1228T86 Lonicera japonica HOM05D009884 ORTHO05D012165 1.1e-83 313.5 153 98.7
HanXRQMTg0579321 Helianthus annuus HOM05D009884 ORTHO05D012165 5.7e-67 258.1 168 79.2
EL10Ac6g14232 Beta vulgaris HOM05D009884 ORTHO05D012165 2.8e-66 255.8 178 75.8
AT2G07599 Arabidopsis thaliana HOM05D009884 ORTHO05D012165 8.5e-63 244.2 163 77.3
Gorai.013G212600 Gossypium raimondii HOM05D009884 ORTHO05D012165 3.1e-57 225.7 171 71.3
Lj2A1224T107 Lonicera japonica HOM05D009884 ORTHO05D012165 1.0e-44 184.1 82 100.0
Gorai.001G164300 Gossypium raimondii HOM05D009884 ORTHO05D012165 7.0e-33 144.8 79 89.9
BcaC05g26892 Brassica carinata HOM05D009884 ORTHO05D012165 1.0e-31 141.0 70 98.6
BolSC28t60399H Brassica oleracea HOM05D009884 ORTHO05D012165 1.0e-31 141.0 70 98.6
BraSC159t45723Z Brassica rapa HOM05D009884 ORTHO05D012165 1.0e-31 141.0 70 98.6
Sed0016567 Sechium edule HOM05D009884 ORTHO05D012165 5.0e-31 138.7 70 95.7
Gohir.D04G096548 Gossypium hirsutum HOM05D009884 ORTHO05D012165 2.1e-29 133.3 87 77.0
HanXRQChr08g0236081 Helianthus annuus HOM05D009884 ORTHO05D012165 1.7e-23 113.6 58 96.6
HanXRQChr09g0242431 Helianthus annuus HOM05D009884 ORTHO05D012165 8.6e-23 111.3 58 94.8
ECA233G3096 Erigeron canadensis HOM05D009884 ORTHO05D012165 2.0e-19 100.1 48 100.0
SabraMtG0003600 Salix brachista HOM05D009884 ORTHO05D012165 2.5e-14 83.2 45 80.0
ATR0584G178 Amborella trichopoda HOM05D009884 ORTHO05D012165 8.0e-13 78.2 92 48.9
CDE02G3846 Ceratophyllum demersum HOM05D009884 ORTHO05D012165 5.2e-12 75.5 43 88.4
unitig_87.g27988 Utricularia gibba HOM05D009884 ORTHO05D012165 5.8e-11 72.0 39 87.2
RcHm_v2.0_Chr6g0256741 Rosa chinensis HOM05D009884 ORTHO05D012165 4.9e-10 68.9 31 93.5
RcHm_v2.0_MTg0498811 Rosa chinensis HOM05D009884 ORTHO05D012165 4.9e-10 68.9 31 93.5
ECA246G3847 Erigeron canadensis HOM05D002622 ORTHO05D002837 8.6e-07 58.2 34 79.4
BraSC77t46670Z Brassica rapa HOM05D009884 ORTHO05D012165 2.5e-06 56.6 29 96.6


User provided reference genes

Program Settings