Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1223G71 Lonicera japonica HOM05D010562 ORTHO05D016078 4.0e-53 211.1 101 100.0
Lj2A1228T88 Lonicera japonica HOM05D010562 ORTHO05D016078 5.5e-50 200.7 110 90.9
AUR62033936 Chenopodium quinoa HOM05D003783 ORTHO05D004568 1.5e-36 156.0 93 81.7
Medtr0082s0050 Medicago truncatula HOM05D012137 ORTHO05D013232 3.8e-27 124.8 101 68.3
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 5.0e-27 124.4 152 50.0
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 9.1e-21 103.6 89 60.7
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 9.1e-21 103.6 89 60.7
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 5.9e-20 100.9 79 64.6
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 5.9e-20 100.9 79 64.6
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 2.2e-19 99.0 47 95.7
EL10Ac5g11442 Beta vulgaris HOM05D010562 ORTHO05D013232 1.9e-18 95.9 56 82.1
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 5.5e-18 94.4 46 95.7
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 5.5e-18 94.4 46 95.7
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 3.1e-13 78.6 38 97.4
ClCG10G004730 Citrullus lanatus HOM05D010562 ORTHO05D016078 4.1e-13 78.2 38 94.7
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 4.2e-10 68.2 42 81.0
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 7.2e-10 67.4 30 100.0
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.6e-09 66.2 30 96.7
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.6e-09 66.2 30 96.7
BcaC05g26878 Brassica carinata HOM05D010562 ORTHO05D016078 4.7e-09 64.7 43 76.7
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 4.7e-09 64.7 30 96.7
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 6.1e-09 64.3 30 96.7
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 1.4e-08 63.2 30 93.3
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 6.7e-08 60.8 69 50.7
BcaC08g43705 Brassica carinata HOM05D010562 ORTHO05D016078 4.4e-07 58.2 54 59.3
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 5.7e-07 57.8 69 49.3
BNapus_Darmor_BZH_scaffold_234p00260 Brassica napus HOM05D010562 ORTHO05D016078 7.5e-07 57.4 30 90.0
C04p19560 Brassica napus HOM05D010562 ORTHO05D016078 7.5e-07 57.4 30 90.0
BolSC28t60342H Brassica oleracea HOM05D010562 ORTHO05D016078 7.5e-07 57.4 30 90.0
BraSC48t46267Z Brassica rapa HOM05D010562 ORTHO05D016078 7.5e-07 57.4 30 90.0
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 4.8e-06 54.7 30 83.3


User provided reference genes

Program Settings