Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.3e-154 548.9 285 100.0
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 5.2e-90 335.1 286 65.4
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.2e-89 334.0 182 89.6
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 2.6e-89 332.8 206 79.6
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 4.4e-89 332.0 181 90.1
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 9.9e-89 330.9 247 70.0
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.7e-88 330.1 181 88.4
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 2.2e-88 329.7 286 65.0
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 2.9e-88 329.3 289 64.4
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 3.7e-88 328.9 286 66.4
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 3.7e-88 328.9 196 82.7
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 6.4e-88 328.2 288 64.9
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 2.4e-87 326.2 199 81.9
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.4e-87 326.2 248 69.8
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 2.4e-87 326.2 185 87.0
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 4.1e-87 325.5 186 86.0
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 5.4e-87 325.1 198 81.8
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 5.4e-87 325.1 198 81.8
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 5.4e-87 325.1 255 69.4
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 5.4e-87 325.1 202 79.7
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.2e-86 323.9 248 69.0
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.6e-86 323.6 190 83.2
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 3.5e-86 322.4 181 85.1
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 4.6e-86 322.0 193 80.8
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 6.0e-86 321.6 181 87.3
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 6.0e-86 321.6 180 86.1
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 6.0e-86 321.6 180 86.1
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 7.8e-86 321.2 192 84.9
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.0e-85 320.9 201 79.6
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 1.7e-85 320.1 177 88.7
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 2.3e-85 319.7 201 80.1
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 3.0e-85 319.3 179 85.5
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 3.0e-85 319.3 198 81.3
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 3.9e-85 318.9 204 77.9
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 6.6e-85 318.2 266 65.0
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.9e-84 316.6 321 58.9
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 2.5e-84 316.2 181 84.5
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 2.5e-84 316.2 178 87.1
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 2.5e-84 316.2 302 60.9
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 3.3e-84 315.8 179 87.2
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 3.3e-84 315.8 266 67.7
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 4.3e-84 315.5 195 79.5
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 5.6e-84 315.1 198 78.3
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 5.6e-84 315.1 179 86.0
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 9.5e-84 314.3 182 83.0
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.2e-83 313.9 203 77.8
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 1.2e-83 313.9 181 83.4
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.2e-83 313.9 287 62.4
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 2.1e-83 313.2 180 85.0
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 2.1e-83 313.2 197 79.7
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 2.1e-83 313.2 256 66.4
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 2.1e-83 313.2 190 81.6
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.1e-83 313.2 285 63.5
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 2.8e-83 312.8 191 80.6
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 3.6e-83 312.4 197 79.7
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 3.6e-83 312.4 181 82.9
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 3.6e-83 312.4 185 82.7
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 4.7e-83 312.0 196 78.6
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 8.1e-83 311.2 196 79.6
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.4e-82 309.7 196 77.6
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 6.8e-82 308.1 179 82.1
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 8.9e-82 307.8 269 65.1
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 3.4e-81 305.8 196 78.1
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 5.8e-81 305.1 251 65.3
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 5.8e-81 305.1 205 75.1
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 4.9e-80 302.0 178 80.9
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.4e-79 300.4 177 80.8
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 4.2e-79 298.9 202 76.7
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 1.3e-77 293.9 285 58.6
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 3.0e-77 292.7 193 76.7
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 3.3e-76 289.3 153 89.5
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 7.3e-76 288.1 275 57.8
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 9.6e-76 287.7 251 61.8
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.2e-75 287.3 210 71.9
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 9.0e-74 281.2 256 64.5
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 9.0e-74 281.2 179 77.7
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 5.8e-73 278.5 190 74.7
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.2e-72 276.6 200 70.0
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.9e-72 276.2 184 75.5
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.1e-71 274.2 193 71.0
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.5e-68 263.8 283 55.8
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.5e-68 263.8 198 68.7
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 2.1e-67 260.0 175 75.4
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.1e-67 260.0 177 72.3
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 2.8e-67 259.6 260 55.4
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 1.7e-64 250.4 276 52.2
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 2.4e-63 246.5 166 68.7
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 5.6e-60 235.3 165 74.5
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 8.1e-59 231.5 123 92.7
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 4.0e-58 229.2 121 90.9
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 4.0e-58 229.2 128 85.2
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 2.5e-52 209.9 137 75.2
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.0e-48 198.0 161 65.2
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.5e-44 184.1 172 56.4
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.3e-44 182.6 120 74.2
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 9.0e-42 174.9 94 88.3
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.2e-35 153.7 129 65.9
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.8e-29 134.0 75 85.3
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.2e-25 121.3 65 86.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.4e-21 107.8 71 77.5
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 2.1e-14 84.0 60 65.0


User provided reference genes

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