Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 1.0e-252 876.3 466 100.0
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 1.5e-89 334.3 475 48.6
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 8.3e-77 292.0 506 43.3
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 7.0e-76 288.9 495 43.4
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 3.5e-75 286.6 479 45.7
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 6.6e-74 282.3 547 41.1
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 3.3e-73 280.0 486 46.3
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.4e-68 263.8 489 41.5
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 9.2e-68 261.9 500 41.4
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 1.2e-67 261.5 465 40.9
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 4.6e-67 259.6 495 41.0
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 6.0e-67 259.2 495 41.0
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 7.8e-67 258.8 489 42.7
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 1.7e-66 257.7 449 40.5
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 5.0e-66 256.1 477 42.1
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 6.6e-66 255.8 492 42.7
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 5.6e-65 252.7 497 41.0
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 1.2e-64 251.5 504 39.5
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 8.1e-64 248.8 474 41.6
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 2.3e-63 247.3 486 40.7
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 4.4e-62 243.0 478 40.6
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 1.3e-61 241.5 498 38.6
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 4.1e-60 236.5 491 39.9
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 4.1e-60 236.5 533 41.8
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 7.1e-60 235.7 457 40.3
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 2.7e-59 233.8 506 38.3
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 1.0e-58 231.9 387 42.1
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.7e-58 231.1 501 36.5
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 1.5e-57 228.0 506 39.1
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 3.3e-57 226.9 501 37.1
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 5.6e-57 226.1 497 37.8
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 5.6e-57 226.1 511 38.7
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 7.3e-57 225.7 501 38.1
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.2e-56 224.9 490 39.8
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 2.1e-56 224.2 501 36.9
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 2.1e-56 224.2 450 38.7
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 4.7e-56 223.0 511 37.0
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 6.2e-56 222.6 483 38.5
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.8e-55 221.1 509 36.0
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 2.3e-55 220.7 510 37.1
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 2.3e-55 220.7 511 37.4
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 3.1e-55 220.3 487 38.2
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 3.1e-55 220.3 449 40.5
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 6.8e-55 219.2 508 37.2
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 1.5e-54 218.0 487 37.0
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 2.6e-54 217.2 525 36.0
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 3.4e-54 216.9 446 39.2
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 4.4e-54 216.5 479 38.2
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 9.9e-54 215.3 484 38.6
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 9.9e-54 215.3 493 40.0
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 2.9e-53 213.8 488 36.3
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 3.7e-53 213.4 495 35.2
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 4.9e-53 213.0 451 38.8
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 2.4e-52 210.7 511 35.6
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 4.1e-52 209.9 587 33.9
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.2e-51 208.4 194 63.4
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 1.6e-51 208.0 431 38.1
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 3.5e-51 206.8 512 34.2
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 1.5e-49 201.4 485 37.1
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 2.5e-49 200.7 479 36.3
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 9.6e-49 198.7 513 34.7
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 6.2e-48 196.1 240 48.3
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.4e-47 194.9 525 33.3
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 3.1e-47 193.7 448 35.9
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 4.0e-47 193.4 191 57.6
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 1.2e-46 191.8 538 35.3
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 2.6e-46 190.7 207 56.0
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 2.6e-46 190.7 209 55.5
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 8.4e-45 185.7 524 34.2
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 1.2e-43 181.8 207 53.1
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.6e-43 181.4 508 31.9
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 1.6e-43 181.4 474 34.2
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 1.6e-43 181.4 550 33.8
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 7.8e-43 179.1 197 55.3
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 1.0e-42 178.7 237 48.9
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.0e-42 178.7 193 57.5
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 6.6e-42 176.0 210 51.9
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 5.6e-41 172.9 497 34.6
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 3.6e-40 170.2 214 48.6
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 6.2e-40 169.5 214 49.5
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 6.2e-40 169.5 214 49.1
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 6.2e-40 169.5 214 49.1
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 1.1e-39 168.7 208 50.5
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 1.4e-39 168.3 213 47.4
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 1.4e-39 168.3 213 47.4
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 4.0e-39 166.8 196 51.0
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 6.9e-39 166.0 230 43.5
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 2.6e-38 164.1 403 34.2
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 2.6e-38 164.1 208 48.6
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 3.4e-38 163.7 214 47.7
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 4.9e-37 159.8 452 36.3
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 6.4e-37 159.5 479 33.0
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 1.1e-36 158.7 211 45.5
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 1.1e-36 158.7 517 34.2
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 5.1e-34 149.8 158 53.2
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 1.1e-33 148.7 215 45.1
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 1.1e-31 142.1 175 52.6
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.3e-31 139.8 129 63.6
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 9.0e-31 139.0 114 67.5
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 1.5e-30 138.3 196 49.0
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 2.9e-29 134.0 232 41.8
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 4.2e-28 130.2 448 29.0
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 4.2e-28 130.2 135 54.1
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 5.5e-28 129.8 155 43.9
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.4e-23 115.2 83 67.5
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 2.0e-22 111.3 88 62.5
Actinidia00674 Actinidia chinensis HOM05D002567 ORTHO05D006538 5.8e-22 109.8 315 34.9
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 1.0e-21 109.0 500 26.8
Actinidia32250 Actinidia chinensis HOM05D002567 ORTHO05D006538 6.3e-16 89.7 313 32.9
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.4e-15 88.6 63 65.1
Actinidia02762 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.4e-15 87.8 123 49.6
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 1.6e-11 75.1 138 37.0
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.0e-10 72.4 199 31.7
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 5.1e-10 70.1 199 30.7
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.9e-09 68.2 199 28.6
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 2.5e-09 67.8 60 48.3
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 5.7e-09 66.6 159 34.0
Gohir.D06G001300 Gossypium hirsutum HOM05D002848 ORTHO05D003043 1.8e-07 61.6 131 35.1
Gorai.010G005700 Gossypium raimondii HOM05D002848 ORTHO05D003043 9.0e-07 59.3 131 34.4
MBI19_g13121_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 9.0e-07 59.3 91 47.3
Gohir.D01G099400 Gossypium hirsutum HOM05D002848 ORTHO05D003043 2.6e-06 57.8 155 30.3
Gorai.002G124700 Gossypium raimondii HOM05D002848 ORTHO05D003043 2.6e-06 57.8 184 29.3


User provided reference genes

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