Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1187G54 Lonicera japonica HOM05D000568 ORTHO05D000628 2.2e-64 248.8 129 100.0
Gohir.A11G116700 Gossypium hirsutum HOM05D000568 ORTHO05D000628 1.8e-26 122.9 113 61.9
Haze_04844 Corylus avellana HOM05D000568 ORTHO05D000628 4.5e-25 118.2 112 59.8
FAN24G0913 Fragaria x ananassa HOM05D000568 ORTHO05D000628 3.8e-24 115.2 106 61.3
Ca_00555_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 4.1e-18 95.1 115 49.6
Hma1.2p1_0399F.1_g144030 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 2.0e-17 92.8 166 40.4
Rhsim04G0218900 Rhododendron simsii HOM05D000568 ORTHO05D000628 4.6e-17 91.7 123 45.5
Psat1g190000 Pisum sativum HOM05D000568 ORTHO05D000628 7.8e-17 90.9 108 50.9
Dinv33013 Davidia involucrata HOM05D000568 ORTHO05D000628 3.0e-16 89.0 162 39.5
Hma1.2p1_0698F.1_g205389 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 6.6e-16 87.8 103 48.5
Hma1.2p1_2251F.1_g318090 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 6.6e-16 87.8 103 48.5
GSVIVG01010980001 Vitis vinifera HOM05D000568 ORTHO05D000628 8.6e-16 87.4 176 38.6
Lj1C36G1 Lonicera japonica HOM05D000568 ORTHO05D000628 1.9e-15 86.3 115 47.8
Lalb_Chr07g0177611 Lupinus albus HOM05D000568 ORTHO05D000628 2.5e-15 85.9 113 44.2
vmacro08112 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 4.3e-15 85.1 107 48.6
TWI14G0800 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 1.2e-14 83.6 176 36.9
Actinidia40246 Actinidia chinensis HOM05D000568 ORTHO05D000628 1.6e-14 83.2 98 48.0
Manes.05G066400 Manihot esculenta HOM05D000568 ORTHO05D000628 1.6e-14 83.2 159 37.7
Medtr2g019740 Medicago truncatula HOM05D000568 ORTHO05D000628 1.6e-14 83.2 108 48.1
FAN07G1518 Fragaria x ananassa HOM05D000568 ORTHO05D000628 2.1e-14 82.8 110 44.5
Duzib133G0182 Durio zibethinus HOM05D000568 ORTHO05D000628 2.8e-14 82.4 170 37.1
COL.COLO4_08006 Corchorus olitorius HOM05D000568 ORTHO05D000628 3.6e-14 82.0 159 38.4
Thecc.01G293100 Theobroma cacao HOM05D000568 ORTHO05D000628 4.7e-14 81.6 157 38.9
Glyma.15G095500 Glycine max HOM05D000568 ORTHO05D000628 8.0e-14 80.9 102 47.1
Gorai.007G130500 Gossypium raimondii HOM05D000568 ORTHO05D000628 8.0e-14 80.9 158 38.0
Eucgr.H01196 Eucalyptus grandis HOM05D000568 ORTHO05D000628 1.1e-13 80.5 161 36.6
FAN17G0266 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.1e-13 80.5 119 42.0
Gohir.D11G121800 Gossypium hirsutum HOM05D000568 ORTHO05D000628 1.8e-13 79.7 158 38.0
Oeu044778.1 Olea europaea HOM05D000568 ORTHO05D000628 1.8e-13 79.7 101 46.5
Sabra08G0155300 Salix brachista HOM05D000568 ORTHO05D000628 1.8e-13 79.7 102 45.1
Gohir.A12G009500 Gossypium hirsutum HOM05D000568 ORTHO05D000628 3.1e-13 79.0 157 38.2
Gohir.D08G082900 Gossypium hirsutum HOM05D000568 ORTHO05D000628 3.1e-13 79.0 156 38.5
Lj6A671T65 Lonicera japonica HOM05D000568 ORTHO05D000628 3.1e-13 79.0 109 44.0
Ciclev10019968m.g Citrus clementina HOM05D000568 ORTHO05D000628 4.0e-13 78.6 170 36.5
Phvul.006G163300 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 4.0e-13 78.6 109 44.0
QL12p024472 Quercus lobata HOM05D000568 ORTHO05D000628 5.2e-13 78.2 150 39.3
Gohir.D12G009500 Gossypium hirsutum HOM05D000568 ORTHO05D000628 6.8e-13 77.8 157 37.6
Gorai.008G009500 Gossypium raimondii HOM05D000568 ORTHO05D000628 6.8e-13 77.8 157 37.6
Prupe.8G254900 Prunus persica HOM05D000568 ORTHO05D000628 6.8e-13 77.8 176 34.1
Actinidia00046 Actinidia chinensis HOM05D000568 ORTHO05D000628 1.5e-12 76.6 102 46.1
CAN.G256.19 Capsicum annuum HOM05D000568 ORTHO05D018879 1.5e-12 76.6 117 47.0
VMungo0540G0868 Vigna mungo HOM05D000568 ORTHO05D000628 1.5e-12 76.6 110 44.5
Duzib138G0737 Durio zibethinus HOM05D000568 ORTHO05D000628 2.6e-12 75.9 157 36.3
Glyma.13G217000 Glycine max HOM05D000568 ORTHO05D000628 3.4e-12 75.5 92 44.6
Gorai.004G086700 Gossypium raimondii HOM05D000568 ORTHO05D000628 3.4e-12 75.5 156 37.8
SGA_v2.0_scaffold599G53122 Striga asiatica HOM05D000568 ORTHO05D000628 3.4e-12 75.5 99 41.4
PGR119G1099 Punica granatum HOM05D000568 ORTHO05D000628 5.8e-12 74.7 162 35.8
CiPaw.07G102500 Carya illinoinensis HOM05D000568 ORTHO05D000628 9.8e-12 73.9 154 37.0
Atru.chr5.1247 Acer truncatum HOM05D000568 ORTHO05D000628 2.9e-11 72.4 161 35.4
arahy.Tifrunner.gnm1.ann1.KWAB0D Arachis hypogaea HOM05D000568 ORTHO05D000628 2.9e-11 72.4 162 35.8
arahy.Tifrunner.gnm1.ann1.RI5H0P Arachis hypogaea HOM05D000568 ORTHO05D000628 2.9e-11 72.4 162 35.8
CiPaw.08G099400 Carya illinoinensis HOM05D000568 ORTHO05D000628 3.7e-11 72.0 153 34.6
TPR.G40101 Trifolium pratense HOM05D001236 ORTHO05D001090 3.7e-11 72.0 108 38.0
Glyma.02G153700 Glycine max HOM05D000568 ORTHO05D000628 6.4e-11 71.2 155 35.5
Lj5g0005422 Lotus japonicus HOM05D000568 ORTHO05D000628 6.4e-11 71.2 161 35.4
TPR.G33955 Trifolium pratense HOM05D000568 ORTHO05D000628 6.4e-11 71.2 158 33.5
CSS0038128 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 1.1e-10 70.5 162 35.2
CBR_g5575 Chara braunii HOM05D000568 ORTHO05D005559 1.1e-10 70.5 55 56.4
MD11G1301200 Malus domestica HOM05D000568 ORTHO05D000628 1.1e-10 70.5 163 35.0
FvH4_2g24990 Fragaria vesca HOM05D000568 ORTHO05D000628 1.4e-10 70.1 151 36.4
FAN15G1036 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.4e-10 70.1 151 36.4
FAN20G2496 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.4e-10 70.1 151 36.4
FAN27G1623 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.4e-10 70.1 151 36.4
Actinidia00685 Actinidia chinensis HOM05D000568 ORTHO05D000628 1.9e-10 69.7 161 36.0
Cfa005997 Carpinus fangiana HOM05D000568 ORTHO05D000628 1.9e-10 69.7 154 35.1
TPR.G35517 Trifolium pratense HOM05D000568 ORTHO05D000628 3.2e-10 68.9 69 50.7
MD03G1280300 Malus domestica HOM05D000568 ORTHO05D000628 4.1e-10 68.6 163 34.4
VMungo0720G1879 Vigna mungo HOM05D000568 ORTHO05D000628 9.2e-10 67.4 156 32.1
RcHm_v2.0_Chr6g0292971 Rosa chinensis HOM05D000568 ORTHO05D000628 1.2e-09 67.0 152 36.2
TAR365G0513 Trochodendron aralioides HOM05D000568 ORTHO05D000628 2.7e-09 65.9 167 33.5
Actinidia24846 Actinidia chinensis HOM05D000568 ORTHO05D000628 3.5e-09 65.5 83 51.8
MD03G1279700 Malus domestica HOM05D000568 ORTHO05D000628 4.6e-09 65.1 158 32.9
QL06p008078 Quercus lobata HOM05D000568 ORTHO05D000628 4.6e-09 65.1 148 31.8
Rhsim13G0015800 Rhododendron simsii HOM05D000568 ORTHO05D000628 4.6e-09 65.1 149 34.2
Aa31LG1G29250 Aethionema arabicum HOM05D000568 ORTHO05D000628 6.0e-09 64.7 149 32.9
CSS0001228 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 7.8e-09 64.3 153 31.4
CSS0049456 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 7.8e-09 64.3 153 31.4
GSVIVG01017774001 Vitis vinifera HOM05D000568 ORTHO05D000628 7.8e-09 64.3 154 31.8
Migut.G00186 Erythranthe guttata HOM05D000568 ORTHO05D000628 1.0e-08 63.9 175 30.9
Migut.G00275 Erythranthe guttata HOM05D000568 ORTHO05D000628 1.0e-08 63.9 175 30.9
Glyma.10G020700 Glycine max HOM05D000568 ORTHO05D000628 1.0e-08 63.9 155 33.5
Ca_10358_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 1.3e-08 63.5 160 33.1
MSTRG.3935 Avicennia marina HOM05D000568 ORTHO05D000628 2.3e-08 62.8 161 32.9
Cfa015365 Carpinus fangiana HOM05D000568 ORTHO05D000628 2.3e-08 62.8 159 31.4
Haze_01241 Corylus avellana HOM05D000568 ORTHO05D000628 2.3e-08 62.8 159 31.4
Dinv38308 Davidia involucrata HOM05D000568 ORTHO05D000628 2.3e-08 62.8 181 30.4
Dinv44403 Davidia involucrata HOM05D000568 ORTHO05D000628 2.3e-08 62.8 180 30.0
Nn3g21373 Nelumbo nucifera HOM05D000568 ORTHO05D000628 3.0e-08 62.4 162 32.7
Sp4g29780 Schrenkiella parvula HOM05D000568 ORTHO05D000628 3.0e-08 62.4 157 29.9
vmacro02495 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 3.0e-08 62.4 149 32.9
Oeu062901.3 Olea europaea HOM05D000568 ORTHO05D000628 3.9e-08 62.0 152 32.9
Psat6g167080 Pisum sativum HOM05D000568 ORTHO05D000628 3.9e-08 62.0 86 53.5
unitig_46.g18684 Utricularia gibba HOM05D000568 ORTHO05D000628 3.9e-08 62.0 151 33.1
THA.LOC104817519 Tarenaya hassleriana HOM05D000568 ORTHO05D000628 5.0e-08 61.6 151 31.8
TAR633G0572 Trochodendron aralioides HOM05D000568 ORTHO05D000628 5.0e-08 61.6 154 31.8
Nitab4.5_0002148g0020 Nicotiana tabacum HOM05D000568 ORTHO05D000628 6.6e-08 61.2 158 33.5
Peaxi162Scf00386g00511 Petunia axillaris HOM05D000568 ORTHO05D000628 6.6e-08 61.2 152 33.6
Nn4g25954 Nelumbo nucifera HOM05D000568 ORTHO05D000628 8.6e-08 60.8 147 31.3
SalBow5G5080 Salvia bowleyana HOM05D000568 ORTHO05D000628 8.6e-08 60.8 165 32.1
MSTRG.10081 Avicennia marina HOM05D000568 ORTHO05D000628 1.1e-07 60.5 157 32.5
Ciclev10004882m.g Citrus clementina HOM05D000568 ORTHO05D000628 1.1e-07 60.5 148 31.1
Nitab4.5_0001459g0050 Nicotiana tabacum HOM05D000568 ORTHO05D000628 1.1e-07 60.5 159 32.1
unitig_37.g12387 Utricularia gibba HOM05D000568 ORTHO05D000628 1.1e-07 60.5 149 31.5
Carub.0004s3056 Capsella rubella HOM05D000568 ORTHO05D000628 1.5e-07 60.1 156 30.1
Hma1.2p1_0698F.1_g205386 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 1.5e-07 60.1 148 31.1
Lj4g0003109 Lotus japonicus HOM05D000568 ORTHO05D000628 1.5e-07 60.1 145 31.7
TAR636G3257 Trochodendron aralioides HOM05D000568 ORTHO05D000628 1.5e-07 60.1 154 31.8
Atru.chr4.2791 Acer truncatum HOM05D000568 ORTHO05D000628 1.9e-07 59.7 153 30.1
Aa31LG5G16930 Aethionema arabicum HOM05D000568 ORTHO05D000628 1.9e-07 59.7 157 31.2
CiPaw.01G150900 Carya illinoinensis HOM05D000568 ORTHO05D000628 2.5e-07 59.3 147 31.3
COL.COLO4_13903 Corchorus olitorius HOM05D000568 ORTHO05D000628 2.5e-07 59.3 151 30.5
Lalb_Chr15g0086941 Lupinus albus HOM05D000568 ORTHO05D000628 2.5e-07 59.3 150 32.7
Lalb_Chr12g0196511 Lupinus albus HOM05D000568 ORTHO05D000628 3.3e-07 58.9 150 32.0
MBI19_g47701_MAGBIO Magnolia biondii HOM05D000568 ORTHO05D000628 3.3e-07 58.9 37 64.9
Phvul.003G102600 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 3.3e-07 58.9 152 31.6
Thecc.04G280600 Theobroma cacao HOM05D000568 ORTHO05D000628 3.3e-07 58.9 175 28.6
VMungo1215G1779 Vigna mungo HOM05D000568 ORTHO05D000628 3.3e-07 58.9 152 31.6
AL4G47430 Arabidopsis lyrata HOM05D000568 ORTHO05D000628 4.3e-07 58.5 156 29.5
arahy.Tifrunner.gnm1.ann1.3LDH3N Arachis hypogaea HOM05D000568 ORTHO05D000628 4.3e-07 58.5 153 30.7
CSS0016477 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 4.3e-07 58.5 138 30.4
CARHR143250 Cardamine hirsuta HOM05D000568 ORTHO05D000628 4.3e-07 58.5 153 28.8
Thhalv10001399m.g Eutrema salsugineum HOM05D000568 ORTHO05D000628 4.3e-07 58.5 158 31.0
Aqoxy2G03056 Aquilegia oxysepala HOM05D000568 ORTHO05D000628 7.3e-07 57.8 154 29.9
DCAR_027092 Daucus carota HOM05D000568 ORTHO05D000628 7.3e-07 57.8 148 31.1
FvH4_4g17640 Fragaria vesca HOM05D000568 ORTHO05D000628 7.3e-07 57.8 156 29.5
FAN12G0132 Fragaria x ananassa HOM05D000568 ORTHO05D000628 7.3e-07 57.8 156 29.5
FAN12G0371 Fragaria x ananassa HOM05D000568 ORTHO05D000628 7.3e-07 57.8 156 29.5
FAN22G0784 Fragaria x ananassa HOM05D000568 ORTHO05D000628 7.3e-07 57.8 156 29.5
Gohir.A01G026400 Gossypium hirsutum HOM05D000568 ORTHO05D000628 7.3e-07 57.8 154 29.2
Gohir.D01G023433 Gossypium hirsutum HOM05D000568 ORTHO05D000628 7.3e-07 57.8 154 29.2
Gorai.002G027000 Gossypium raimondii HOM05D000568 ORTHO05D000628 7.3e-07 57.8 154 29.2
Lalb_Chr13g0303741 Lupinus albus HOM05D000568 ORTHO05D000628 9.5e-07 57.4 151 32.5
MD03G1279200 Malus domestica HOM05D000568 ORTHO05D000628 9.5e-07 57.4 59 45.8
PGSC0003DMG400022651 Solanum tuberosum HOM05D000568 ORTHO05D000628 9.5e-07 57.4 147 29.9
AT2G47850 Arabidopsis thaliana HOM05D000568 ORTHO05D000628 1.2e-06 57.0 156 28.8
Cc03_g02100 Coffea canephora HOM05D000568 ORTHO05D000628 1.2e-06 57.0 151 29.8
SEGI_40707 Sequoiadendron giganteum HOM05D000568 ORTHO05D000628 1.2e-06 57.0 144 30.6
Solyc01g067550.3 Solanum lycopersicum HOM05D000568 ORTHO05D000628 1.2e-06 57.0 147 30.6
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 1.2e-06 57.0 100 38.0
PSO210G1296 Papaver somniferum HOM05D000568 ORTHO05D000628 1.6e-06 56.6 146 30.1
RcHm_v2.0_Chr4g0421561 Rosa chinensis HOM05D000568 ORTHO05D000628 1.6e-06 56.6 156 30.8
TWI73G0244 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 1.6e-06 56.6 149 29.5
Medtr4g119280 Medicago truncatula HOM05D000568 ORTHO05D000628 2.1e-06 56.2 121 32.2
Prupe.1G139500 Prunus persica HOM05D000568 ORTHO05D000628 2.1e-06 56.2 164 29.9
BcaB08g36663 Brassica carinata HOM05D000568 ORTHO05D000628 2.8e-06 55.8 149 28.9
Glyma.17G024400 Glycine max HOM05D000568 ORTHO05D000628 2.8e-06 55.8 152 30.3
ClCG05G005940 Citrullus lanatus HOM05D000568 ORTHO05D000628 3.6e-06 55.5 172 29.1
MBI18_g01956_MAGBIO Magnolia biondii HOM05D000568 ORTHO05D000628 3.6e-06 55.5 176 29.0
Medtr1g088880 Medicago truncatula HOM05D000568 ORTHO05D000628 3.6e-06 55.5 76 48.7
Sopen01g029500 Solanum pennellii HOM05D000568 ORTHO05D000628 3.6e-06 55.5 147 29.9
Gohir.A10G162500 Gossypium hirsutum HOM05D000568 ORTHO05D000628 4.7e-06 55.1 152 28.9
Lj3A814G55 Lonicera japonica HOM05D000568 ORTHO05D000628 4.7e-06 55.1 161 29.2
THA.LOC104818850 Tarenaya hassleriana HOM05D000568 ORTHO05D000628 4.7e-06 55.1 153 27.5
TAR362G0552 Trochodendron aralioides HOM05D000568 ORTHO05D000628 4.7e-06 55.1 161 32.3
TAR633G2460 Trochodendron aralioides HOM05D000568 ORTHO05D000628 4.7e-06 55.1 53 47.2
Actinidia14311 Actinidia chinensis HOM05D000568 ORTHO05D000628 6.2e-06 54.7 153 30.1
CiPaw.02G084700 Carya illinoinensis HOM05D000568 ORTHO05D000628 6.2e-06 54.7 169 29.0
MELO3C006627.2 Cucumis melo HOM05D000568 ORTHO05D000628 6.2e-06 54.7 172 29.1
Gohir.A08G073500 Gossypium hirsutum HOM05D000568 ORTHO05D000628 6.2e-06 54.7 119 32.8
DCAR_027091 Daucus carota HOM05D000568 ORTHO05D000628 8.1e-06 54.3 147 31.3
ECA240G2233 Erigeron canadensis HOM05D000568 ORTHO05D000628 8.1e-06 54.3 142 28.9
Oeu040497.1 Olea europaea HOM05D000568 ORTHO05D000628 8.1e-06 54.3 87 35.6
PSO832G1313 Papaver somniferum HOM05D000568 ORTHO05D000628 8.1e-06 54.3 146 29.5


User provided reference genes

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