Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1134T23 Lonicera japonica HOM05D001910 ORTHO05D008236 8.9e-33 142.9 67 100.0
MSTRG.21434 Avicennia marina HOM05D001910 ORTHO05D008236 1.1e-25 119.4 55 98.2
Actinidia37580 Actinidia chinensis HOM05D001910 ORTHO05D008236 4.0e-25 117.5 55 96.4
Cc02_g29620 Coffea canephora HOM05D001910 ORTHO05D008236 1.5e-24 115.5 57 93.0
SGA_v2.0_scaffold1G00713 Striga asiatica HOM05D001910 ORTHO05D008236 1.5e-24 115.5 63 84.1
Rhsim01G0257800 Rhododendron simsii HOM05D001910 ORTHO05D008236 2.6e-24 114.8 55 94.5
vmacro11682 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 3.4e-24 114.4 55 94.5
vmacro14768 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 3.4e-24 114.4 55 94.5
CSS0019761 Camellia sinensis var. sinensis HOM05D001910 ORTHO05D008236 4.5e-24 114.0 55 92.7
QL04p069147 Quercus lobata HOM05D001910 ORTHO05D008236 5.8e-24 113.6 54 90.7
Oeu020385.1 Olea europaea HOM05D001910 ORTHO05D008236 7.6e-24 113.2 55 94.5
Atru.chr8.786 Acer truncatum HOM05D001910 ORTHO05D008236 9.9e-24 112.8 55 90.9
Cpa.g.sc8.177 Carica papaya HOM05D001910 ORTHO05D008236 1.3e-23 112.5 55 89.1
Eucgr.H00809 Eucalyptus grandis HOM05D001910 ORTHO05D008236 1.3e-23 112.5 55 87.3
arahy.Tifrunner.gnm1.ann1.6V862X Arachis hypogaea HOM05D001910 ORTHO05D008236 1.7e-23 112.1 55 87.3
arahy.Tifrunner.gnm1.ann1.BW0B7M Arachis hypogaea HOM05D001910 ORTHO05D008236 1.7e-23 112.1 55 87.3
CANSAT01G2429 Cannabis sativa HOM05D001910 ORTHO05D008236 1.7e-23 112.1 55 90.9
Migut.D00518 Erythranthe guttata HOM05D001910 ORTHO05D008236 1.7e-23 112.1 55 90.9
CAN.G771.59 Capsicum annuum HOM05D001910 ORTHO05D008236 2.2e-23 111.7 55 90.9
Sopen06g034950 Solanum pennellii HOM05D001910 ORTHO05D008236 2.2e-23 111.7 55 90.9
PGSC0003DMG400020157 Solanum tuberosum HOM05D001910 ORTHO05D008236 2.2e-23 111.7 55 90.9
SGA_v2.0_scaffold467G52032 Striga asiatica HOM05D001910 ORTHO05D008236 2.2e-23 111.7 55 92.7
DCAR_012631 Daucus carota HOM05D001910 ORTHO05D008236 2.9e-23 111.3 55 90.9
Lsat_1_v5_gn_5_179721 Lactuca sativa HOM05D001910 ORTHO05D008236 2.9e-23 111.3 54 88.9
SalBow4G2176 Salvia bowleyana HOM05D001910 ORTHO05D008236 2.9e-23 111.3 55 92.7
CiPaw.03G151600 Carya illinoinensis HOM05D001910 ORTHO05D008236 3.8e-23 110.9 55 89.1
Nn1g03143 Nelumbo nucifera HOM05D001910 ORTHO05D008236 3.8e-23 110.9 55 87.3
ClCG09G009170 Citrullus lanatus HOM05D001910 ORTHO05D008236 4.9e-23 110.5 55 85.5
Dinv04667 Davidia involucrata HOM05D001910 ORTHO05D008236 4.9e-23 110.5 55 87.3
Duzib213G0818 Durio zibethinus HOM05D001910 ORTHO05D008236 4.9e-23 110.5 55 87.3
Gohir.D01G042702 Gossypium hirsutum HOM05D001910 ORTHO05D008236 4.9e-23 110.5 55 87.3
Gorai.002G053700 Gossypium raimondii HOM05D001910 ORTHO05D008236 4.9e-23 110.5 55 87.3
QL08p015909 Quercus lobata HOM05D001910 ORTHO05D008236 4.9e-23 110.5 54 87.0
THA.LOC104808775 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 4.9e-23 110.5 55 85.5
CANSAT01G0581 Cannabis sativa HOM05D001910 ORTHO05D008236 6.4e-23 110.2 55 87.3
TAR365G0897 Trochodendron aralioides HOM05D001910 ORTHO05D008236 6.4e-23 110.2 55 85.5
Cfa002548 Carpinus fangiana HOM05D001910 ORTHO05D008236 8.4e-23 109.8 55 87.3
PSO455G0057 Papaver somniferum HOM05D001910 ORTHO05D008236 8.4e-23 109.8 55 85.5
Hund05522 Selenicereus undatus HOM05D001910 ORTHO05D008236 8.4e-23 109.8 55 85.5
THA.LOC104821641 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 8.4e-23 109.8 55 85.5
CsaV3_7G025770 Cucumis sativus L. HOM05D001910 ORTHO05D008236 1.1e-22 109.4 55 85.5
Duzib116G0073 Durio zibethinus HOM05D001910 ORTHO05D008236 1.1e-22 109.4 55 85.5
Prupe.2G099400 Prunus persica HOM05D001910 ORTHO05D008236 1.4e-22 109.0 55 87.3
HanXRQChr01g0014701 Helianthus annuus HOM05D001910 ORTHO05D008236 1.9e-22 108.6 54 88.9
Thecc.07G118300 Theobroma cacao HOM05D001910 ORTHO05D008236 1.9e-22 108.6 55 83.6
C03p54270 Brassica napus HOM05D001910 ORTHO05D008236 2.4e-22 108.2 55 85.5
COL.COLO4_17529 Corchorus olitorius HOM05D001910 ORTHO05D008236 2.4e-22 108.2 55 85.5
Gohir.A01G053300 Gossypium hirsutum HOM05D001910 ORTHO05D008236 2.4e-22 108.2 55 85.5
AT3G24730 Arabidopsis thaliana HOM05D001910 ORTHO05D008236 3.2e-22 107.8 55 83.6
A03p43920 Brassica napus HOM05D001910 ORTHO05D008236 3.2e-22 107.8 55 85.5
BraA03t13522Z Brassica rapa HOM05D001910 ORTHO05D008236 3.2e-22 107.8 55 85.5
Lalb_Chr21g0313131 Lupinus albus HOM05D001910 ORTHO05D008236 3.2e-22 107.8 55 83.6
Manes.12G042200 Manihot esculenta HOM05D001910 ORTHO05D008236 3.2e-22 107.8 55 81.8
PGR083G0261 Punica granatum HOM05D001910 ORTHO05D008236 3.2e-22 107.8 57 80.7
GSVIVG01028558001 Vitis vinifera HOM05D001910 ORTHO05D008236 3.2e-22 107.8 55 85.5
Hma1.2p1_0670F.1_g200490 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 4.2e-22 107.5 55 87.3
TPR.G22393 Trifolium pratense HOM05D001910 ORTHO05D008236 4.2e-22 107.5 55 81.8
EL10Ac1g01456 Beta vulgaris HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 83.6
EL10Ac4g08878 Beta vulgaris HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 83.6
BcaB03g14567 Brassica carinata HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 83.6
BcaC01g03256 Brassica carinata HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 83.6
BolC3t17713H Brassica oleracea HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 83.6
Lj5g0025373 Lotus japonicus HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 83.6
Sp3g22460 Schrenkiella parvula HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 83.6
unitig_8.g3604 Utricularia gibba HOM05D001910 ORTHO05D008236 5.4e-22 107.1 55 87.3
AL3G40450 Arabidopsis lyrata HOM05D001910 ORTHO05D008236 7.1e-22 106.7 55 81.8
Carub.0003s2512 Capsella rubella HOM05D001910 ORTHO05D008236 7.1e-22 106.7 55 83.6
CDE02G3332 Ceratophyllum demersum HOM05D001910 ORTHO05D008236 7.1e-22 106.7 55 83.6
Aqoxy2G03787 Aquilegia oxysepala HOM05D001910 ORTHO05D008236 9.3e-22 106.3 60 80.0
Ca_10470_v3 Cicer arietinum L. HOM05D001910 ORTHO05D008236 9.3e-22 106.3 55 81.8
Sed0026342 Sechium edule HOM05D001910 ORTHO05D008236 9.3e-22 106.3 55 80.0
Sc05g0002380 Simmondsia chinensis HOM05D001910 ORTHO05D008236 9.3e-22 106.3 55 80.0
MELO3C012778.2 Cucumis melo HOM05D001910 ORTHO05D008236 1.2e-21 105.9 55 81.8
Glyma.20G189700 Glycine max HOM05D001910 ORTHO05D008236 1.2e-21 105.9 55 83.6
Mapoly0023s0044 Marchantia polymorpha HOM05D001910 ORTHO05D008236 1.2e-21 105.9 53 83.0
MD11G1172800 Malus domestica HOM05D001910 ORTHO05D008236 2.1e-21 105.1 53 83.0
Os11g0297900 Oryza sativa ssp. japonica HOM05D001910 ORTHO05D008236 2.1e-21 105.1 53 86.8
Actinidia30091 Actinidia chinensis HOM05D001910 ORTHO05D008236 2.7e-21 104.8 70 74.3
Potri.001G287600 Populus trichocarpa HOM05D001910 ORTHO05D008236 3.5e-21 104.4 55 80.0
Zm00001eb327680 Zea mays HOM05D001910 ORTHO05D008236 4.6e-21 104.0 53 84.9
CARHR101060 Cardamine hirsuta HOM05D001910 ORTHO05D008236 6.0e-21 103.6 55 80.0
Lj5g0014177 Lotus japonicus HOM05D001910 ORTHO05D008236 6.0e-21 103.6 55 81.8
RcHm_v2.0_Chr5g0046911 Rosa chinensis HOM05D001910 ORTHO05D008236 6.0e-21 103.6 55 80.0
RcHm_v2.0_Chr5g0047331 Rosa chinensis HOM05D001910 ORTHO05D008236 6.0e-21 103.6 55 80.0
SEGI_34564 Sequoiadendron giganteum HOM05D001910 ORTHO05D008236 6.0e-21 103.6 53 83.0
FvH4_3g25760 Fragaria vesca HOM05D001910 ORTHO05D008236 7.9e-21 103.2 55 80.0
FAN11G0824 Fragaria x ananassa HOM05D001910 ORTHO05D008236 7.9e-21 103.2 55 80.0
FAN25G3251 Fragaria x ananassa HOM05D001910 ORTHO05D008236 2.3e-20 101.7 55 78.2
Aa31LG8G7820 Aethionema arabicum HOM05D001910 ORTHO05D008236 3.9e-20 100.9 55 80.0
Phvul.007G144300 Phaseolus vulgaris HOM05D001910 ORTHO05D008236 3.9e-20 100.9 55 80.0
FAN16G2655 Fragaria x ananassa HOM05D001910 ORTHO05D008236 5.1e-20 100.5 55 76.4
Psat5g176160 Pisum sativum HOM05D001910 ORTHO05D008236 5.1e-20 100.5 55 78.2
QL04p055010 Quercus lobata HOM05D001910 ORTHO05D008236 5.1e-20 100.5 67 71.6
SMO367G1217 Selaginella moellendorffii HOM05D001910 ORTHO05D008236 6.7e-20 100.1 53 75.5
HPP92_008933 Vanilla planifolia HOM05D001910 ORTHO05D008236 6.7e-20 100.1 55 81.8
Thhalv10002702m.g Eutrema salsugineum HOM05D001910 ORTHO05D008236 8.7e-20 99.8 55 76.4
TWI36G0271 Tripterygium wilfordii HOM05D001910 ORTHO05D008236 1.1e-19 99.4 53 79.2
Pp3c22_7790 Physcomitrium patens HOM05D001910 ORTHO05D008236 4.3e-19 97.4 53 75.5
VMungo0720G1587 Vigna mungo HOM05D001910 ORTHO05D008236 2.6e-16 88.2 80 56.2
AagrBONN_evm.TU.Sc2ySwM_117.2466 Anthoceros agrestis HOM05D001910 ORTHO05D008236 1.3e-15 85.9 51 66.7
Lj5g0012786 Lotus japonicus HOM05D001910 ORTHO05D008236 2.4e-09 65.1 36 77.8
Sabra16G0179900 Salix brachista HOM05D001910 ORTHO05D008236 2.0e-08 62.0 56 53.6


User provided reference genes

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