Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 0.0e+00 1356.3 682 100.0
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 5.9e-289 997.3 695 72.7
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 1.1e-274 949.9 697 70.2
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 5.3e-274 947.6 694 69.2
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 5.5e-263 911.0 691 67.6
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 6.3e-259 897.5 697 67.0
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 8.2e-259 897.1 695 64.9
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 1.8e-258 896.0 688 66.0
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 2.4e-258 895.6 688 66.0
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 2.0e-257 892.5 690 67.7
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 5.9e-257 891.0 676 66.7
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 1.0e-256 890.2 696 65.4
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 1.3e-256 889.8 697 65.3
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 2.9e-256 888.6 656 68.6
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 1.2e-254 883.2 694 65.4
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 1.6e-254 882.9 696 64.9
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 2.1e-254 882.5 702 64.4
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 3.0e-253 878.6 670 65.5
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 5.2e-253 877.9 670 65.4
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 3.4e-252 875.2 683 66.2
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 4.4e-252 874.8 701 63.5
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 2.2e-251 872.5 696 64.2
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 2.0e-249 865.9 694 63.1
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 4.5e-249 864.8 686 63.6
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 5.9e-249 864.4 671 64.8
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 5.9e-249 864.4 664 66.6
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 4.2e-247 858.2 698 62.6
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 5.5e-247 857.8 618 68.8
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 5.5e-247 857.8 677 65.4
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 1.2e-246 856.7 688 62.9
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 7.5e-244 847.4 658 64.1
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 7.5e-244 847.4 682 63.0
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 1.7e-243 846.3 664 65.8
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 2.2e-243 845.9 687 64.8
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.2e-243 845.9 686 62.5
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 4.9e-243 844.7 686 62.4
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 5.4e-242 841.3 689 62.4
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.0e-241 839.3 680 62.6
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 2.3e-240 835.9 699 60.8
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 5.0e-240 834.7 697 63.1
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 8.6e-240 833.9 683 64.1
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 1.1e-239 833.6 694 63.3
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 1.5e-239 833.2 683 61.9
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 5.6e-239 831.2 683 61.8
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 1.6e-238 829.7 711 61.3
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 2.8e-238 828.9 695 61.4
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 1.8e-237 826.2 686 61.1
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 3.1e-237 825.5 667 62.7
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 2.0e-236 822.8 668 62.1
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 3.4e-236 822.0 683 61.2
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 9.8e-236 820.5 684 61.0
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 1.3e-235 820.1 687 60.7
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 2.2e-235 819.3 668 63.2
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 4.1e-234 815.1 693 60.3
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 4.1e-234 815.1 668 62.7
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 9.2e-234 813.9 684 60.5
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 9.2e-234 813.9 679 61.7
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 1.2e-233 813.5 666 63.7
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 2.7e-233 812.4 667 63.0
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 3.5e-233 812.0 678 61.2
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 6.0e-233 811.2 694 59.9
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 6.0e-233 811.2 645 62.6
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 2.3e-232 809.3 688 61.0
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 3.9e-232 808.5 694 61.2
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 5.0e-232 808.1 688 63.1
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 8.6e-232 807.4 672 62.4
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 1.1e-231 807.0 689 61.1
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 1.9e-231 806.2 687 59.8
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 4.3e-231 805.1 725 60.7
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 1.2e-230 803.5 673 62.0
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 8.0e-230 800.8 690 60.6
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 1.1e-229 800.4 682 60.7
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 3.1e-229 798.9 684 59.6
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 2.0e-228 796.2 699 60.4
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 4.4e-228 795.0 663 61.4
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 1.3e-227 793.5 687 59.2
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 1.3e-227 793.5 698 59.9
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.3e-227 793.5 687 60.1
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 4.9e-227 791.6 678 60.5
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 6.4e-227 791.2 661 61.6
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 1.4e-226 790.0 684 59.9
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 2.4e-226 789.3 684 59.5
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 3.0e-224 782.3 675 60.1
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 1.1e-223 780.4 672 60.0
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 1.9e-223 779.6 675 60.0
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 1.6e-222 776.5 670 60.3
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 2.1e-222 776.2 672 59.7
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 2.8e-222 775.8 672 60.0
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 6.2e-222 774.6 584 65.8
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 1.8e-221 773.1 672 59.8
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 7.5e-220 767.7 672 59.7
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 9.9e-220 767.3 573 65.1
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 9.2e-218 760.8 584 65.2
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 2.7e-217 759.2 608 63.8
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 3.3e-215 752.3 690 56.4
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 1.4e-210 736.9 687 56.2
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 2.5e-207 726.1 674 56.8
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 9.9e-204 714.1 656 55.0
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 9.9e-196 687.6 634 55.8
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 3.1e-189 666.0 584 58.2
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 2.5e-186 656.4 549 59.2
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 5.9e-172 608.6 560 56.1
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 3.2e-162 576.2 610 52.5
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.4e-160 570.9 496 59.7
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 8.5e-155 551.6 645 47.3
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.7e-153 545.8 607 49.4
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 9.7e-151 538.1 681 46.8
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 3.8e-147 526.2 427 61.1
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 8.8e-144 515.0 595 49.1
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 2.1e-129 467.2 452 53.3
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 3.6e-121 439.9 664 40.5
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 2.0e-119 434.1 393 60.8
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 7.5e-119 432.2 820 35.5
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 9.2e-109 398.7 393 53.4
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 9.2e-101 372.1 518 42.1
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 5.8e-87 326.2 226 68.1
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 7.3e-82 309.3 280 56.4
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 2.8e-73 280.8 218 65.6
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.1e-69 268.9 346 43.9
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 2.1e-68 264.6 640 33.0
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 7.4e-66 256.1 284 49.6
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 6.5e-62 243.0 402 41.0
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 2.1e-60 238.0 226 54.4
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 2.7e-52 211.1 674 28.3
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 7.4e-50 203.0 137 73.7
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 9.7e-50 202.6 690 27.7
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.1e-48 199.1 376 37.2
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 5.9e-47 193.4 670 28.4
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 5.9e-47 193.4 265 43.4
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 2.5e-45 188.0 172 57.0
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 6.1e-44 183.3 121 72.7
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 8.2e-41 172.9 144 56.2
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 3.2e-37 161.0 170 50.6
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.4e-37 159.5 302 35.8
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 1.5e-34 152.1 140 57.9
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 5.9e-31 140.2 188 40.4
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.2e-29 134.0 228 38.2
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.2e-28 132.5 228 37.7
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.2e-28 132.5 228 37.7
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.2e-28 132.5 228 37.7
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.2e-28 132.5 228 37.7
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 4.7e-28 130.6 150 46.7
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 2.6e-26 124.8 87 77.0
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 2.2e-25 121.7 160 44.4
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 4.8e-25 120.6 160 43.8
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.1e-24 119.4 160 43.8
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 4.1e-24 117.5 160 43.8
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 5.9e-23 113.6 244 35.2
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 3.0e-19 101.3 62 82.3
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 6.8e-19 100.1 189 37.0
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 3.4e-18 97.8 80 65.0
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 1.0e-11 76.3 78 55.1
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 1.8e-11 75.5 78 51.3
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 2.3e-11 75.1 50 70.0
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 1.4e-08 65.9 40 70.0


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