Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1125G46 Lonicera japonica HOM05D000691 ORTHO05D000378 1.9e-156 555.8 282 100.0
Lj2C116T7 Lonicera japonica HOM05D000691 ORTHO05D000378 2.1e-75 286.6 449 44.8
Lj4C714G8 Lonicera japonica HOM05D000691 ORTHO05D000378 1.5e-73 280.4 369 48.8
Lj3C273T2 Lonicera japonica HOM05D000691 ORTHO05D000378 4.1e-63 245.7 385 44.4
Lj1C763G4 Lonicera japonica HOM05D000691 ORTHO05D000378 2.8e-51 206.5 462 35.5
Lj9A24G30 Lonicera japonica HOM05D000691 ORTHO05D000378 8.4e-48 194.9 264 47.7
Lj5P786T11 Lonicera japonica HOM05D000691 ORTHO05D000378 1.9e-44 183.7 106 88.7
Lj6C97T3 Lonicera japonica HOM05D000691 ORTHO05D000378 1.2e-43 181.0 103 89.3
Lj9P219T12 Lonicera japonica HOM05D000691 ORTHO05D000378 3.1e-42 176.4 123 78.9
Lju50C9T4 Lonicera japonica HOM05D000691 ORTHO05D000378 4.0e-42 176.0 101 89.1
Lj5C102G24 Lonicera japonica HOM05D000691 ORTHO05D000378 8.9e-42 174.9 106 84.9
Lj9C219G10 Lonicera japonica HOM05D000691 ORTHO05D000378 1.4e-39 167.5 96 87.5
Lj9A424G33 Lonicera japonica HOM05D000691 ORTHO05D000378 7.1e-39 165.2 274 43.8
Lju2092C1T0 Lonicera japonica HOM05D000691 ORTHO05D000378 7.1e-39 165.2 97 86.6
Lj3C644G3 Lonicera japonica HOM05D000691 ORTHO05D000378 3.9e-37 159.5 106 74.5
Lj2P609T17 Lonicera japonica HOM05D000691 ORTHO05D000378 9.3e-31 138.3 78 88.5
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.6e-27 127.5 140 55.7
Lj5P491T3 Lonicera japonica HOM05D000691 ORTHO05D000378 1.6e-27 127.5 135 57.8
Lj3P820T55 Lonicera japonica HOM05D000691 ORTHO05D000378 2.8e-27 126.7 69 94.2
Lj1C3T4 Lonicera japonica HOM05D000691 ORTHO05D000378 4.8e-27 125.9 106 67.0
Lj8P523T19 Lonicera japonica HOM05D000691 ORTHO05D000378 1.8e-26 124.0 69 91.3
Lj5P564T12 Lonicera japonica HOM05D000691 ORTHO05D000378 2.4e-26 123.6 72 87.5
Lj1P995G28 Lonicera japonica HOM05D000691 ORTHO05D000378 3.1e-26 123.2 107 67.3
Lj1P895T45 Lonicera japonica HOM05D000691 ORTHO05D000378 5.3e-26 122.5 69 91.3
Lj1A487G33 Lonicera japonica HOM05D000691 ORTHO05D000378 6.9e-26 122.1 127 59.8
Lj2P603T27 Lonicera japonica HOM05D000691 ORTHO05D000378 6.9e-26 122.1 69 91.3
Lj9P705T22 Lonicera japonica HOM05D000691 ORTHO05D000378 7.6e-25 118.6 114 62.3
Lju926C12T2 Lonicera japonica HOM05D000691 ORTHO05D000378 3.8e-24 116.3 71 84.5
Lj4P131T15 Lonicera japonica HOM05D000691 ORTHO05D000378 8.4e-24 115.2 108 63.0
Lj4P131T14 Lonicera japonica HOM05D000691 ORTHO05D000378 1.1e-23 114.8 102 64.7
Lju2092C1G1 Lonicera japonica HOM05D000691 ORTHO05D000378 9.3e-23 111.7 140 50.0
Lj1A489G15 Lonicera japonica HOM05D000691 ORTHO05D000378 3.0e-21 106.7 83 69.9
Lj1P573T13 Lonicera japonica HOM05D000691 ORTHO05D000378 8.7e-21 105.1 145 42.1
Lju427C2T0 Lonicera japonica HOM05D000691 ORTHO05D000378 4.3e-20 102.8 138 42.0
Lj2P727T24 Lonicera japonica HOM05D000691 ORTHO05D000378 9.0e-18 95.1 136 39.7
Lj1P195T27 Lonicera japonica HOM05D000691 ORTHO05D000378 2.0e-17 94.0 48 93.8
Lj3P463T4 Lonicera japonica HOM05D000691 ORTHO05D000378 2.6e-17 93.6 50 92.0
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 6.5e-16 89.0 186 33.3
Lj2P295T30 Lonicera japonica HOM05D000691 ORTHO05D000378 1.4e-15 87.8 108 43.5
Lj3P545T31 Lonicera japonica HOM05D000691 ORTHO05D000378 1.4e-15 87.8 108 42.6
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 1.4e-15 87.8 186 33.3
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-15 87.4 186 33.3
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-15 87.4 186 33.3
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-15 87.4 186 33.3
Lj2P476T23 Lonicera japonica HOM05D000691 ORTHO05D000378 2.5e-15 87.0 79 63.3
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.3e-15 85.1 139 40.3
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.0e-14 82.4 139 39.6
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.0e-14 82.4 139 39.6
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 1.3e-13 81.3 179 33.5
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 3.9e-13 79.7 139 38.8
Dinv19013 Davidia involucrata HOM05D002996 ORTHO05D000378 8.7e-13 78.6 75 61.3
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-12 78.2 176 31.2
EL10Ac9g20846 Beta vulgaris HOM05D000004 ORTHO05D000002 4.3e-12 76.3 103 43.7
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 7.4e-12 75.5 97 47.4
CSS0044219 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D008835 1.3e-11 74.7 166 30.1
SHI26345 Sapria himalayana HOM05D000691 ORTHO05D000378 1.3e-11 74.7 147 32.7
CSS0042350 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 1.6e-11 74.3 91 45.1
AUR62029860 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.1e-11 73.9 143 35.7
AUR62042282 Chenopodium quinoa HOM05D000004 ORTHO05D000378 1.1e-10 71.6 228 29.8
ATR1153G065 Amborella trichopoda HOM05D000691 ORTHO05D000378 1.4e-10 71.2 96 45.8
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-10 70.9 157 31.8
AUR62042237 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.8e-10 70.9 96 37.5
Sopen01g024770 Solanum pennellii HOM05D000691 ORTHO05D000378 1.8e-10 70.9 109 36.7
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 2.4e-10 70.5 140 35.7
CSS0004394 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 3.1e-10 70.1 76 48.7
Lj8C666G3 Lonicera japonica HOM05D031903 ORTHO05D000378 3.1e-10 70.1 134 34.3
Sopen05g012500 Solanum pennellii HOM05D000691 ORTHO05D000378 4.1e-10 69.7 100 39.0
CSS0000763 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-10 68.9 157 31.8
AUR62013492 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.0e-10 68.6 101 36.6
Sopen12g008510 Solanum pennellii HOM05D000691 ORTHO05D000378 9.0e-10 68.6 104 39.4
AUR62039030 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.2e-09 68.2 159 34.0
Lju225C6G6 Lonicera japonica HOM05D000691 ORTHO05D000378 1.2e-09 68.2 173 32.4
CSS0024510 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-09 67.8 153 31.4
SHI32366 Sapria himalayana HOM05D000004 ORTHO05D008835 1.5e-09 67.8 113 32.7
CSS0045028 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-09 67.4 130 33.8
FvH4_6g19301 Fragaria vesca HOM05D000691 ORTHO05D000378 2.6e-09 67.0 158 31.6
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-09 67.0 103 37.9
CSS0022106 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 3.4e-09 66.6 83 45.8
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 3.4e-09 66.6 163 31.3
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-09 66.6 104 38.5
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 4.5e-09 66.2 106 33.0
Lju1220C5G5 Lonicera japonica HOM05D000691 ORTHO05D000378 4.5e-09 66.2 92 40.2
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-09 66.2 103 37.9
Oeu010110.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-09 65.9 96 38.5
Oeu053090.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-09 65.9 96 38.5
SHI06504 Sapria himalayana HOM05D000004 ORTHO05D008835 7.6e-09 65.5 188 28.7
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 1.0e-08 65.1 95 36.8
Oeu030414.1 Olea europaea HOM05D000691 ORTHO05D000378 1.3e-08 64.7 95 36.8
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 2.2e-08 63.9 91 40.7
AUR62038564 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.9e-08 63.5 159 30.2
SHI11948 Sapria himalayana HOM05D000004 ORTHO05D000378 2.9e-08 63.5 97 37.1
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 5.0e-08 62.8 136 36.0
SHI10619 Sapria himalayana HOM05D000691 ORTHO05D000378 5.0e-08 62.8 155 29.7
SHI27179 Sapria himalayana HOM05D000004 ORTHO05D008835 5.0e-08 62.8 154 27.3
COL.COLO4_16141 Corchorus olitorius HOM05D000691 ORTHO05D000378 8.4e-08 62.0 150 28.7
FvH4_3g33536 Fragaria vesca HOM05D000691 ORTHO05D000378 8.4e-08 62.0 118 36.4
FvH4_c7g00010 Fragaria vesca HOM05D000691 ORTHO05D000378 8.4e-08 62.0 118 36.4
Sopen01g009130 Solanum pennellii HOM05D000691 ORTHO05D000378 8.4e-08 62.0 103 36.9
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 8.4e-08 62.0 101 38.6
AUR62035181 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.1e-07 61.6 99 33.3
FvH4_1g29810 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-07 61.6 118 35.6
CSS0004285 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-07 61.2 139 35.3
AUR62012616 Chenopodium quinoa HOM05D002396 ORTHO05D002779 1.4e-07 61.2 145 30.3
SHI22219 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-07 61.2 82 37.8
Hma1.2p1_0637F.1_g193600 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 1.9e-07 60.8 95 34.7
PSO210G1278 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-07 60.8 107 29.0
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 60.8 101 37.6
Sopen07g004930 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 60.8 90 41.1
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 60.8 101 37.6
FvH4_6g33011 Fragaria vesca HOM05D000691 ORTHO05D000378 2.5e-07 60.5 136 30.9
SHI14680 Sapria himalayana HOM05D007114 ORTHO05D010679 3.2e-07 60.1 81 40.7
SHI15815 Sapria himalayana HOM05D000004 ORTHO05D000002 3.2e-07 60.1 116 31.9
CiPaw.05G045400 Carya illinoinensis HOM05D000691 ORTHO05D000378 4.2e-07 59.7 95 32.6
Sp7g05810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.2e-07 59.7 240 25.0
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 59.7 103 36.9
Atru.chr9.973 Acer truncatum HOM05D000004 ORTHO05D023206 5.5e-07 59.3 68 42.6
FvH4_1g23713 Fragaria vesca HOM05D000691 ORTHO05D000378 5.5e-07 59.3 97 38.1
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 59.3 136 31.6
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-07 59.3 109 31.2
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 5.5e-07 59.3 101 36.6
Oeu013033.1 Olea europaea HOM05D000004 ORTHO05D008835 7.2e-07 58.9 134 29.1
Sopen10g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-07 58.9 91 39.6
AUR62032892 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.3e-07 58.5 145 29.0
Oeu055027.1 Olea europaea HOM05D000691 ORTHO05D000378 9.3e-07 58.5 153 29.4
Sopen01g013840 Solanum pennellii HOM05D000691 ORTHO05D000378 9.3e-07 58.5 91 40.7
Ah.14g080140 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.2e-06 58.2 94 35.1
AUR62042240 Chenopodium quinoa HOM05D000004 ORTHO05D000378 1.2e-06 58.2 137 29.2
FvH4_5g31701 Fragaria vesca HOM05D000691 ORTHO05D000378 1.2e-06 58.2 118 34.7
Lj2C295G20 Lonicera japonica HOM05D031903 ORTHO05D235884 1.2e-06 58.2 114 35.1
Hund15082 Selenicereus undatus HOM05D000691 ORTHO05D000378 1.2e-06 58.2 83 37.3
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 58.2 133 30.1
Oeu043549.1 Olea europaea HOM05D000004 ORTHO05D000378 1.6e-06 57.8 134 29.1
SHI15096 Sapria himalayana HOM05D000691 ORTHO05D000378 1.6e-06 57.8 115 28.7
Sopen02g003600 Solanum pennellii HOM05D000691 ORTHO05D000378 1.6e-06 57.8 202 27.2
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 57.8 108 31.5
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-06 57.8 108 30.6
AUR62015945 Chenopodium quinoa HOM05D000252 ORTHO05D000378 2.1e-06 57.4 158 27.8
AUR62033255 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.1e-06 57.4 137 29.2
SHI31502 Sapria himalayana HOM05D000004 ORTHO05D008835 2.1e-06 57.4 87 35.6
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 2.1e-06 57.4 103 35.0
Lj1C1113T3 Lonicera japonica HOM05D000691 ORTHO05D000378 2.7e-06 57.0 156 32.1
Oeu032030.1 Olea europaea HOM05D000691 ORTHO05D000378 2.7e-06 57.0 153 26.1
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 57.0 108 30.6
Sopen07g006720 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 57.0 78 42.3
Sopen12g010320 Solanum pennellii HOM05D000691 ORTHO05D000378 2.7e-06 57.0 104 33.7
AUR62014576 Chenopodium quinoa HOM05D000004 ORTHO05D000378 3.5e-06 56.6 135 28.1
AUR62021227 Chenopodium quinoa HOM05D000196 ORTHO05D000378 3.5e-06 56.6 138 29.0
AUR62034419 Chenopodium quinoa HOM05D000004 ORTHO05D000378 3.5e-06 56.6 151 26.5
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.6 108 30.6
Sopen00g013060 Solanum pennellii HOM05D000691 ORTHO05D000378 3.5e-06 56.6 102 37.3
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.6 108 30.6
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.6 108 30.6
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.6 108 30.6
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.6 108 30.6
Sopen11g025100 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.6 92 35.9
THA.LOC104806071 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.5e-06 56.6 130 28.5
EL10Ac5g11258 Beta vulgaris HOM05D000691 ORTHO05D000378 4.6e-06 56.2 102 33.3
AUR62028639 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.6e-06 56.2 157 29.3
FvH4_3g28953 Fragaria vesca HOM05D000004 ORTHO05D000002 4.6e-06 56.2 73 41.1
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 4.6e-06 56.2 82 34.1
SEGI_29490 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.6e-06 56.2 100 33.0
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.2 101 35.6
Sopen12g011680 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.2 101 34.7
PGSC0003DMG400021088 Solanum tuberosum HOM05D000691 ORTHO05D000378 4.6e-06 56.2 99 32.3
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 55.8 134 30.6
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 55.8 108 29.6
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 55.8 108 29.6
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 55.8 101 30.7
AUR62037853 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.9e-06 55.5 86 37.2
Oeu003523.1 Olea europaea HOM05D000691 ORTHO05D000378 7.9e-06 55.5 94 34.0
SHI25117 Sapria himalayana HOM05D000004 ORTHO05D000002 7.9e-06 55.5 67 44.8
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 55.5 94 34.0
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 55.5 108 29.6
Sopen09g013140 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 55.5 130 30.8


User provided reference genes

Program Settings