Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 6.6e-241 837.0 447 100.0
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 9.2e-134 481.1 470 54.7
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 3.9e-132 475.7 491 54.2
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 9.9e-128 461.1 447 54.8
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 9.6e-123 444.5 453 52.5
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 6.2e-122 441.8 448 53.8
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 8.1e-122 441.4 496 50.8
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 5.8e-120 435.3 448 53.3
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 5.8e-120 435.3 448 53.3
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 4.9e-119 432.2 448 52.7
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 6.4e-119 431.8 353 62.6
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.4e-118 429.9 447 52.1
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.2e-118 429.5 448 52.9
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 4.2e-118 429.1 447 52.6
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.6e-117 427.2 447 52.6
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.3e-116 424.1 455 51.0
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 2.3e-116 423.3 456 52.2
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 3.0e-116 422.9 447 51.9
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 8.7e-116 421.4 447 51.2
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.5e-115 420.6 447 51.5
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.9e-115 420.2 375 58.4
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 9.6e-115 417.9 375 58.7
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 2.1e-114 416.8 453 51.2
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.8e-114 416.4 449 50.3
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 3.7e-114 416.0 376 58.0
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.1e-113 414.5 499 47.7
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 1.1e-113 414.5 456 50.9
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 9.0e-113 411.4 447 50.1
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 9.0e-113 411.4 445 50.3
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.5e-112 410.6 488 48.4
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.5e-112 410.6 485 48.7
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 3.4e-112 409.5 447 50.8
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 7.6e-112 408.3 445 49.9
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 7.6e-112 408.3 445 49.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 9.9e-112 407.9 445 49.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.3e-111 407.5 463 49.9
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 2.9e-111 406.4 445 50.6
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 1.1e-110 404.4 455 49.9
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.4e-110 404.1 475 46.3
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 4.2e-110 402.5 445 51.0
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 3.5e-109 399.4 448 50.0
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 6.0e-109 398.7 481 47.8
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 6.0e-109 398.7 307 62.9
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.3e-108 397.5 445 48.1
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 3.0e-108 396.4 447 49.0
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.3e-107 392.5 449 48.8
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 4.3e-107 392.5 329 60.8
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.3e-106 391.0 337 59.9
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.6e-106 390.6 449 48.6
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.4e-105 387.5 462 47.2
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 1.8e-105 387.1 449 48.1
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.8e-105 387.1 465 48.6
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.6e-104 383.3 472 48.7
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 4.5e-104 382.5 489 53.0
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 5.8e-104 382.1 437 49.4
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 7.6e-104 381.7 450 47.6
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.7e-103 380.6 449 48.1
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.8e-100 370.5 377 51.7
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 8.2e-98 361.7 348 54.3
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.4e-97 360.9 294 59.9
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 1.2e-96 357.8 354 52.0
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.5e-96 355.9 474 45.4
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.0e-95 354.8 302 55.6
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 2.2e-95 353.6 343 52.8
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.9e-95 353.2 335 54.3
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 6.5e-95 352.1 301 56.5
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.9e-94 350.5 302 55.0
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 9.4e-94 348.2 353 50.4
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.2e-93 347.8 388 49.2
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 1.2e-93 347.8 388 49.2
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.6e-93 347.4 448 44.9
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.6e-93 347.4 352 50.0
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 2.1e-93 347.1 396 47.7
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 2.1e-93 347.1 396 47.7
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.1e-93 347.1 350 51.4
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 5.1e-92 342.4 401 47.4
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.1e-91 341.3 374 47.1
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 2.0e-91 340.5 352 49.4
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.7e-90 337.4 343 50.1
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 6.9e-89 332.0 500 42.0
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.1e-86 324.7 456 39.9
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.6e-83 313.5 316 53.5
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 2.4e-81 307.0 309 51.8
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 4.1e-81 306.2 317 53.0
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 5.9e-80 302.4 295 49.5
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 5.5e-78 295.8 318 51.6
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.0e-76 291.6 217 66.4
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 1.2e-72 278.1 302 49.7
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.0e-71 275.0 227 61.2
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 1.7e-71 274.2 214 65.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 1.7e-71 274.2 295 46.1
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 3.4e-67 260.0 327 46.2
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 4.5e-64 249.6 303 45.5
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 2.9e-63 246.9 296 47.6
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.5e-62 244.6 396 42.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 2.4e-57 227.3 296 45.9
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 3.5e-56 223.4 236 46.6
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.7e-55 221.1 167 60.5
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 2.0e-48 197.6 196 49.5
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 1.9e-46 191.0 332 35.8
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 6.1e-45 186.0 223 47.5
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.7e-42 177.9 301 35.9
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.7e-42 176.8 259 42.1
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.2e-40 171.8 158 55.7
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 7.3e-38 162.5 97 78.4
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 2.1e-32 144.4 87 71.3
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 3.0e-31 140.6 84 71.4
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 2.5e-30 137.5 120 56.7
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 1.9e-25 121.3 326 29.1
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.0e-23 115.5 107 55.1
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 6.2e-21 106.3 84 54.8
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.2e-19 102.1 194 33.5
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 5.8e-19 99.8 225 34.2
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.7e-16 90.9 131 43.5
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.1e-14 85.5 192 32.8
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 4.4e-11 73.6 58 60.3
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 9.9e-11 72.4 47 68.1
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 8.7e-07 59.3 113 34.5


User provided reference genes

Program Settings