Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 1.7e-82 309.3 162 100.0
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 8.4e-61 237.3 165 77.6
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 1.5e-57 226.5 169 74.0
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 1.6e-56 223.0 164 74.4
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 6.3e-56 221.1 164 72.0
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.8e-53 211.8 164 70.1
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 7.2e-52 207.6 167 71.3
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.2e-51 206.8 164 67.7
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.7e-51 205.7 171 65.5
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.3e-50 203.4 169 69.2
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 3.0e-50 202.2 158 69.6
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 6.7e-50 201.1 171 64.3
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 8.7e-50 200.7 165 64.2
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.9e-49 199.5 170 64.1
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 4.3e-49 198.4 166 65.1
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 4.3e-49 198.4 159 65.4
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 5.7e-49 198.0 165 64.2
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 7.4e-49 197.6 164 64.0
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 1.6e-48 196.4 166 67.5
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.2e-48 196.1 160 68.1
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.7e-48 195.3 164 67.1
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 3.7e-48 195.3 165 66.7
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.7e-48 195.3 160 68.1
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 4.8e-48 194.9 167 63.5
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 8.2e-48 194.1 163 62.6
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.4e-47 192.6 167 63.5
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 3.1e-47 192.2 178 64.6
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 3.1e-47 192.2 164 63.4
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 4.1e-47 191.8 166 61.4
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 4.1e-47 191.8 164 62.2
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 4.1e-47 191.8 164 61.6
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.2e-46 190.3 156 65.4
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-45 186.8 165 64.8
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.7e-45 186.4 164 62.2
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.2e-45 186.0 165 63.6
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.2e-45 186.0 165 63.0
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.9e-45 185.7 165 63.6
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.9e-45 185.7 174 58.6
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 2.5e-44 182.6 166 63.9
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 7.2e-44 181.0 168 63.1
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 7.2e-44 181.0 158 62.0
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 9.4e-44 180.6 164 62.8
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.6e-43 179.9 160 63.8
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 2.1e-43 179.5 163 58.9
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 2.7e-43 179.1 163 58.9
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.6e-43 178.7 155 64.5
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.4e-42 176.8 160 63.1
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.8e-42 176.4 127 74.8
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 5.1e-42 174.9 171 56.7
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 6.7e-42 174.5 166 60.2
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.5e-41 173.3 164 59.1
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 9.7e-41 170.6 171 58.5
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.7e-40 169.9 173 57.8
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 2.2e-40 169.5 162 59.3
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.7e-40 168.7 166 59.6
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 4.8e-40 168.3 157 61.1
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 8.2e-40 167.5 160 58.1
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 1.1e-39 167.2 165 58.8
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 4.1e-39 165.2 166 60.8
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 4.1e-39 165.2 164 57.3
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 4.1e-39 165.2 165 55.8
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 9.1e-39 164.1 162 60.5
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 1.2e-38 163.7 166 60.2
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 2.6e-38 162.5 147 60.5
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 2.6e-38 162.5 164 54.9
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 3.4e-38 162.2 158 60.1
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 5.9e-38 161.4 159 60.4
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 5.9e-38 161.4 186 53.8
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.0e-37 160.6 163 59.5
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.3e-37 160.2 161 59.0
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.3e-37 160.2 161 57.8
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 1.7e-37 159.8 160 55.0
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 2.2e-37 159.5 158 53.8
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.8e-37 158.7 159 59.7
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 5.0e-37 158.3 159 59.7
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 5.0e-37 158.3 159 60.4
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 8.5e-37 157.5 154 57.8
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.1e-36 157.1 154 57.1
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.5e-36 156.0 166 56.6
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 3.2e-36 155.6 155 57.4
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 7.2e-36 154.5 164 56.7
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 3.6e-35 152.1 166 57.2
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.0e-34 150.6 155 56.1
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 1.0e-34 150.6 191 50.3
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 2.3e-34 149.4 146 52.7
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 6.7e-34 147.9 141 53.9
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 8.8e-34 147.5 141 57.4
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.5e-33 146.7 165 55.2
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 2.0e-33 146.4 137 61.3
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 6.3e-32 141.4 148 56.8
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 8.2e-32 141.0 155 55.5
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 8.2e-32 141.0 148 56.1
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 8.2e-32 141.0 148 56.1
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 4.1e-31 138.7 153 49.7
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.2e-30 137.1 154 55.2
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 3.5e-30 135.6 168 48.8
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 4.5e-30 135.2 161 51.6
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 2.2e-29 132.9 160 51.2
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.9e-29 132.5 150 50.7
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 5.0e-29 131.7 158 50.0
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 1.5e-28 130.2 164 51.8
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.5e-28 130.2 144 51.4
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.5e-28 130.2 162 46.9
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 1.9e-28 129.8 144 52.8
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.9e-28 129.8 144 51.4
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 7.2e-28 127.9 163 47.9
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.6e-27 126.7 165 49.1
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 2.1e-27 126.3 166 47.6
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.1e-27 126.3 161 47.8
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 2.7e-27 125.9 161 47.8
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 3.6e-27 125.6 157 52.2
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 3.6e-27 125.6 140 53.6
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 1.0e-26 124.0 164 47.6
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 1.4e-26 123.6 165 46.7
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 1.4e-26 123.6 165 46.7
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 1.4e-26 123.6 163 47.9
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 1.8e-26 123.2 156 50.0
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.8e-26 123.2 151 49.7
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 4.0e-26 122.1 167 48.5
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 4.0e-26 122.1 156 48.7
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 5.2e-26 121.7 77 87.0
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 6.7e-26 121.3 156 48.7
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 1.5e-25 120.2 134 55.2
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 2.0e-25 119.8 163 46.6
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 2.0e-25 119.8 163 46.6
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 3.3e-25 119.0 140 52.1
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.3e-24 117.1 156 48.1
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 3.7e-24 115.5 167 42.5
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 4.8e-24 115.2 156 47.4
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 2.4e-23 112.8 130 47.7
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 4.1e-23 112.1 132 49.2
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 5.3e-23 111.7 116 53.4
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 1.6e-22 110.2 153 45.1
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 3.5e-22 109.0 91 59.3
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 3.5e-22 109.0 91 59.3
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 3.5e-22 109.0 137 48.2
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 4.5e-22 108.6 129 48.8
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 7.7e-22 107.8 151 43.7
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 4.2e-20 102.1 153 43.1
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 6.1e-19 98.2 158 43.0
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 3.0e-18 95.9 155 40.6
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 5.2e-18 95.1 91 59.3
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 3.4e-17 92.4 122 45.1
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 1.4e-15 87.0 153 41.2
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 1.4e-15 87.0 141 36.2
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.1e-15 85.9 153 41.2
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 5.4e-15 85.1 76 57.9
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.2e-14 84.0 153 41.8
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 3.5e-14 82.4 160 33.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 4.5e-14 82.0 141 34.8
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.0e-13 80.9 153 40.5
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.0e-13 80.9 153 40.5
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 2.9e-13 79.3 91 47.3
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 5.0e-13 78.6 152 40.8
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 1.1e-12 77.4 96 52.1
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 9.5e-12 74.3 104 46.2
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 1.2e-11 73.9 89 55.1
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 2.7e-11 72.8 69 52.2
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 2.7e-11 72.8 73 53.4
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.8e-10 70.1 67 58.2
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 1.5e-09 67.0 161 34.8
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 1.5e-09 67.0 134 35.8
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.0e-09 66.6 68 54.4
DCAR_023429 Daucus carota HOM05D057861 ORTHO05D004842 9.2e-07 57.8 146 34.2
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.2e-06 57.4 61 52.5
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.2e-06 57.4 61 52.5
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.6e-06 57.0 79 40.5
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 4.5e-06 55.5 58 60.3
Rhsim06G0095600 Rhododendron simsii HOM05D003225 ORTHO05D338509 5.9e-06 55.1 69 50.7


User provided reference genes

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