Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 3.5e-135 485.0 247 100.0
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 2.0e-77 293.1 227 62.6
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 8.3e-76 287.7 234 62.0
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 4.1e-75 285.4 239 59.0
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 5.4e-75 285.0 226 60.6
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 1.1e-72 277.3 243 58.4
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.5e-72 276.9 230 60.9
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 2.5e-72 276.2 229 59.0
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.5e-72 276.2 239 54.0
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 2.5e-72 276.2 226 58.4
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 5.6e-72 275.0 237 55.3
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 9.5e-72 274.2 239 55.2
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 2.1e-71 273.1 229 59.0
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 4.0e-70 268.9 229 58.1
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 2.0e-69 266.5 230 57.4
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 4.4e-69 265.4 234 57.3
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 7.5e-69 264.6 230 56.1
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 7.5e-69 264.6 225 56.0
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.3e-68 263.8 231 56.7
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 2.2e-68 263.1 225 55.6
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 4.9e-68 261.9 228 59.2
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 4.9e-68 261.9 225 55.6
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 4.9e-68 261.9 227 55.1
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.2e-66 257.3 228 54.8
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 7.8e-66 254.6 234 54.3
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 1.0e-65 254.2 238 55.0
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 5.0e-65 251.9 237 53.6
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.1e-64 250.8 233 53.2
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.9e-64 250.0 230 54.8
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 3.3e-64 249.2 232 56.0
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 9.5e-64 247.7 230 56.5
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.6e-63 246.9 249 53.4
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 4.7e-63 245.4 248 50.8
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 4.7e-63 245.4 230 55.2
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 6.2e-63 245.0 228 52.2
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 8.1e-63 244.6 237 51.5
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.4e-62 243.8 230 51.7
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.1e-62 242.7 229 53.7
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 5.2e-62 241.9 231 53.7
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 8.9e-62 241.1 229 51.5
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 8.9e-62 241.1 232 55.2
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 1.2e-61 240.7 247 52.6
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.2e-61 240.7 236 53.8
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 9.8e-61 237.7 232 51.7
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 9.8e-61 237.7 235 52.8
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.3e-60 237.3 240 50.0
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 1.3e-60 237.3 228 55.3
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.3e-60 237.3 228 55.7
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 1.7e-60 236.9 243 51.4
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.7e-60 236.9 229 51.1
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 3.7e-60 235.7 247 52.2
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 6.4e-60 235.0 229 51.5
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.4e-59 233.8 237 51.5
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.4e-59 233.8 234 50.4
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 1.9e-59 233.4 236 49.6
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 2.4e-59 233.0 234 52.1
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 5.4e-59 231.9 230 53.0
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 7.1e-59 231.5 231 50.2
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 9.2e-59 231.1 239 49.8
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 9.2e-59 231.1 227 51.5
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 2.7e-58 229.6 229 50.7
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.3e-57 227.3 231 51.1
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.7e-57 226.9 235 47.7
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.7e-57 226.9 250 47.6
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 3.9e-57 225.7 228 48.2
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 5.1e-57 225.3 182 58.2
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 8.6e-57 224.6 228 49.6
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.1e-56 224.2 225 50.2
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 1.9e-56 223.4 227 48.0
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 3.3e-56 222.6 252 46.4
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 7.3e-56 221.5 230 48.3
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 2.1e-55 219.9 228 47.8
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 8.1e-55 218.0 227 47.6
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.4e-54 217.2 227 47.6
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 1.8e-54 216.9 227 48.0
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 4.0e-54 215.7 232 47.8
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 5.2e-54 215.3 159 64.8
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 6.8e-54 214.9 149 67.1
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 9.9e-53 211.1 234 52.1
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 5.4e-51 205.3 232 47.0
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 3.5e-50 202.6 227 47.1
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 7.8e-50 201.4 228 45.6
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.7e-49 200.3 176 58.0
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 5.1e-49 198.7 227 45.8
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 1.6e-47 193.7 226 42.9
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 8.1e-47 191.4 228 48.2
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 5.8e-45 185.3 230 41.3
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 9.9e-45 184.5 226 46.5
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 3.8e-44 182.6 171 50.9
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 1.2e-42 177.6 225 44.9
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 6.0e-42 175.3 164 54.9
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 8.7e-41 171.4 149 55.7
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 4.3e-40 169.1 128 59.4
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 2.1e-39 166.8 104 73.1
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 3.4e-37 159.5 268 36.6
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 3.1e-30 136.3 270 30.0
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 4.0e-30 136.0 191 40.3
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 3.4e-29 132.9 185 39.5
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 7.6e-29 131.7 123 51.2
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.9e-24 117.1 159 41.5
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 9.6e-24 114.8 121 51.2
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 1.8e-22 110.5 83 57.8
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.2e-21 107.8 145 44.1
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 3.3e-16 89.7 226 29.6
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 1.8e-14 84.0 114 42.1
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 2.0e-13 80.5 71 56.3
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 3.4e-13 79.7 98 46.9
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 7.6e-13 78.6 196 32.7
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 3.3e-08 63.2 105 39.0
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 2.8e-07 60.1 104 38.5
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 6.3e-07 58.9 55 49.1


User provided reference genes

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