Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 1.6e-55 219.2 107 100.0
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 9.3e-32 140.2 91 72.5
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.7e-31 138.7 91 73.6
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 6.0e-31 137.5 77 84.4
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.7e-30 136.0 91 70.3
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 6.6e-30 134.0 91 69.2
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 6.6e-30 134.0 91 70.3
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-29 133.3 91 70.3
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 5.6e-29 131.0 91 67.0
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.3e-28 129.8 97 64.9
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 1.3e-28 129.8 91 67.0
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 1.3e-28 129.8 91 68.1
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 1.3e-28 129.8 91 69.2
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 2.1e-28 129.0 91 68.1
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 2.1e-28 129.0 75 80.0
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 2.8e-28 128.6 91 67.0
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 3.6e-28 128.3 75 81.3
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 4.8e-28 127.9 91 69.2
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 6.2e-28 127.5 91 67.0
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 6.2e-28 127.5 91 67.0
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 6.2e-28 127.5 91 67.0
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 8.1e-28 127.1 91 68.1
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-27 126.7 91 68.1
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.1e-27 126.7 97 63.9
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.1e-27 126.7 91 68.1
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.8e-27 125.9 91 65.9
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 1.8e-27 125.9 91 65.9
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 2.4e-27 125.6 91 65.9
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 2.4e-27 125.6 91 67.0
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 2.4e-27 125.6 91 68.1
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 3.1e-27 125.2 91 67.0
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 3.1e-27 125.2 91 65.9
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 5.3e-27 124.4 91 65.9
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 5.3e-27 124.4 91 67.0
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 5.3e-27 124.4 91 67.0
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 5.3e-27 124.4 91 63.7
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 6.9e-27 124.0 91 65.9
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 1.2e-26 123.2 91 65.9
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 1.2e-26 123.2 75 77.3
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.5e-26 122.9 91 64.8
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 1.5e-26 122.9 91 64.8
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 2.0e-26 122.5 91 64.8
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 2.0e-26 122.5 89 65.2
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 2.6e-26 122.1 75 80.0
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 4.5e-26 121.3 75 77.3
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 4.5e-26 121.3 75 77.3
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 4.5e-26 121.3 91 64.8
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 5.8e-26 120.9 91 64.8
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 5.8e-26 120.9 91 64.8
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 5.8e-26 120.9 91 63.7
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 5.8e-26 120.9 91 63.7
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 9.9e-26 120.2 91 64.8
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 1.7e-25 119.4 91 65.9
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 2.2e-25 119.0 91 61.5
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 2.2e-25 119.0 91 61.5
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 2.2e-25 119.0 91 61.5
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 2.9e-25 118.6 75 76.0
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 4.9e-25 117.9 75 76.0
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 4.9e-25 117.9 75 76.0
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 4.9e-25 117.9 75 76.0
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 6.4e-25 117.5 91 63.7
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 8.4e-25 117.1 75 74.7
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 8.4e-25 117.1 85 65.9
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 1.1e-24 116.7 75 73.3
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 1.1e-24 116.7 91 60.4
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 1.1e-24 116.7 91 60.4
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 1.4e-24 116.3 91 60.4
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 1.4e-24 116.3 85 67.1
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 1.9e-24 115.9 91 58.2
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 1.9e-24 115.9 91 60.4
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.9e-24 115.9 91 63.7
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.9e-24 115.9 91 63.7
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 1.9e-24 115.9 91 63.7
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 1.9e-24 115.9 91 60.4
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 1.9e-24 115.9 91 62.6
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 1.9e-24 115.9 75 73.3
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 2.4e-24 115.5 89 62.9
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.4e-24 115.5 89 62.9
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 3.2e-24 115.2 75 73.3
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 3.2e-24 115.2 75 73.3
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 3.2e-24 115.2 89 60.7
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 4.2e-24 114.8 75 73.3
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 4.2e-24 114.8 91 62.6
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 5.4e-24 114.4 106 56.6
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 7.1e-24 114.0 91 57.1
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 7.1e-24 114.0 75 70.7
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 7.1e-24 114.0 91 58.2
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 7.1e-24 114.0 91 58.2
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 9.3e-24 113.6 75 70.7
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 9.3e-24 113.6 91 58.2
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.2e-23 113.2 91 58.2
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 1.2e-23 113.2 89 62.9
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 1.6e-23 112.8 75 69.3
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.6e-23 112.8 89 60.7
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 2.1e-23 112.5 91 61.5
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.1e-23 112.5 89 60.7
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 2.7e-23 112.1 75 69.3
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 3.5e-23 111.7 89 60.7
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 3.5e-23 111.7 91 57.1
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 3.5e-23 111.7 91 57.1
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 4.6e-23 111.3 75 68.0
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 4.6e-23 111.3 91 59.3
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 4.6e-23 111.3 75 70.7
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 1.0e-22 110.2 75 66.7
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 3.0e-22 108.6 89 61.8
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 5.1e-22 107.8 91 53.8
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 5.1e-22 107.8 73 67.1
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.1e-21 106.7 65 76.9
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 1.1e-21 106.7 91 57.1
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.9e-21 105.9 65 75.4
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 3.3e-21 105.1 91 59.3
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 4.3e-21 104.8 89 59.6
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 9.6e-21 103.6 76 63.2
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 6.9e-19 97.4 75 60.0
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 9.0e-19 97.1 91 52.7
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 3.8e-17 91.7 119 42.9
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 6.4e-17 90.9 67 68.7
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 8.4e-17 90.5 91 46.2
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 1.9e-16 89.4 104 48.1
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 1.9e-16 89.4 91 47.3
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 2.4e-16 89.0 93 52.7
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 9.3e-16 87.0 50 82.0
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 9.3e-16 87.0 86 47.7
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 4.6e-15 84.7 87 44.8
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 1.6e-12 76.3 78 43.6
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 2.1e-12 75.9 42 83.3
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 2.1e-12 75.9 77 54.5
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 3.7e-12 75.1 77 53.2
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 6.2e-12 74.3 43 81.4
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 2.0e-10 69.3 43 74.4
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 7.6e-10 67.4 43 72.1
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 2.5e-08 62.4 41 63.4
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 3.0e-06 55.5 52 51.9


User provided reference genes

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