Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1108T30 Lonicera japonica HOM05D004791 ORTHO05D005637 3.5e-189 664.8 345 100.0
CSS0048448 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 1.8e-89 333.6 346 55.5
CSS0048046 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 1.2e-85 320.9 345 53.9
Hma1.2p1_1631F.1_g294630 Hydrangea macrophylla HOM05D004791 ORTHO05D005637 2.2e-82 310.1 347 54.2
CSS0026131 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 2.8e-82 309.7 346 53.2
Nitab4.5_0000105g0450 Nicotiana tabacum HOM05D004791 ORTHO05D005637 4.9e-82 308.9 346 54.3
CSS0033533 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 6.3e-82 308.5 346 52.9
DCAR_018598 Daucus carota HOM05D004791 ORTHO05D005637 1.6e-80 303.9 345 50.7
Lsat_1_v5_gn_5_176000 Lactuca sativa HOM05D004791 ORTHO05D005637 2.0e-80 303.5 346 52.3
Dinv28770 Davidia involucrata HOM05D004791 ORTHO05D005637 1.0e-79 301.2 302 57.3
vmacro02852 Vaccinium macrocarpon HOM05D004791 ORTHO05D005637 1.0e-79 301.2 361 49.9
vmacro14664 Vaccinium macrocarpon HOM05D004791 ORTHO05D005637 3.8e-79 299.3 355 51.8
Nitab4.5_0008751g0050 Nicotiana tabacum HOM05D004791 ORTHO05D005637 2.5e-78 296.6 346 52.6
SalBow6G3468 Salvia bowleyana HOM05D004791 ORTHO05D005637 5.6e-78 295.4 346 50.9
SGA_v2.0_scaffold158G37484 Striga asiatica HOM05D004791 ORTHO05D005637 5.6e-78 295.4 345 50.7
Peaxi162Scf00390g00128 Petunia axillaris HOM05D004791 ORTHO05D005637 1.2e-77 294.3 346 51.7
Manes.05G196500 Manihot esculenta HOM05D004791 ORTHO05D005637 6.8e-76 288.5 358 49.7
Nitab4.5_0001348g0240 Nicotiana tabacum HOM05D004791 ORTHO05D005637 6.8e-76 288.5 346 51.7
Nitab4.5_0000539g0030 Nicotiana tabacum HOM05D004791 ORTHO05D005637 2.0e-75 287.0 346 50.9
SGA_v2.0_scaffold8G04482 Striga asiatica HOM05D004791 ORTHO05D005637 2.6e-75 286.6 345 49.9
Aqoxy2G04139 Aquilegia oxysepala HOM05D004791 ORTHO05D005637 4.4e-75 285.8 345 50.1
Eucgr.B03774 Eucalyptus grandis HOM05D004791 ORTHO05D005637 1.3e-74 284.3 340 50.3
PGSC0003DMG400027664 Solanum tuberosum HOM05D004791 ORTHO05D005637 1.7e-74 283.9 346 49.7
Migut.D00780 Erythranthe guttata HOM05D004791 ORTHO05D005637 2.2e-74 283.5 348 50.6
Solyc06g082810.3 Solanum lycopersicum HOM05D004791 ORTHO05D005637 3.7e-74 282.7 346 49.7
GSVIVG01037421001 Vitis vinifera HOM05D004791 ORTHO05D005637 3.7e-74 282.7 347 50.1
TAR633G0334 Trochodendron aralioides HOM05D004791 ORTHO05D005637 6.4e-74 282.0 381 48.3
CAN.G874.52 Capsicum annuum HOM05D004791 ORTHO05D005637 8.3e-74 281.6 346 49.1
Hund25111 Selenicereus undatus HOM05D004791 ORTHO05D005637 8.3e-74 281.6 349 48.7
Sopen06g034170 Solanum pennellii HOM05D004791 ORTHO05D005637 4.1e-73 279.3 346 49.1
HanXRQChr01g0013701 Helianthus annuus HOM05D004791 ORTHO05D005637 7.0e-73 278.5 346 50.0
LjContig00564g0026958 Lotus japonicus HOM05D004791 ORTHO05D005637 2.7e-72 276.6 346 48.3
RcHm_v2.0_Chr5g0050091 Rosa chinensis HOM05D004791 ORTHO05D005637 1.3e-71 274.2 341 49.0
Potri.001G222300 Populus trichocarpa HOM05D004791 ORTHO05D005637 3.0e-71 273.1 346 48.3
FvH4_3g27591 Fragaria vesca HOM05D004791 ORTHO05D005637 5.0e-71 272.3 343 48.1
MD02G1268200 Malus domestica HOM05D004791 ORTHO05D005637 5.0e-71 272.3 346 48.3
Aa31LG5G8380 Aethionema arabicum HOM05D004791 ORTHO05D005637 6.6e-71 271.9 339 49.0
Ca_06167_v3 Cicer arietinum L. HOM05D004791 ORTHO05D005637 1.1e-70 271.2 345 46.7
Ca_06184_v3 Cicer arietinum L. HOM05D004791 ORTHO05D005637 1.1e-70 271.2 345 46.7
PGR102G1910 Punica granatum HOM05D004791 ORTHO05D005637 1.5e-70 270.8 350 50.3
ECA248G0040 Erigeron canadensis HOM05D004791 ORTHO05D005637 5.6e-70 268.9 340 46.8
Gohir.A08G000072 Gossypium hirsutum HOM05D004791 ORTHO05D005637 5.6e-70 268.9 347 48.7
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 5.6e-70 268.9 344 47.4
Gohir.A13G230300 Gossypium hirsutum HOM05D004791 ORTHO05D005637 7.3e-70 268.5 344 47.7
Lalb_Chr04g0249541 Lupinus albus HOM05D004791 ORTHO05D005637 7.3e-70 268.5 345 47.2
PSO675G0111 Papaver somniferum HOM05D004791 ORTHO05D005637 7.3e-70 268.5 342 48.2
Sc15g0007330 Simmondsia chinensis HOM05D004791 ORTHO05D005637 9.5e-70 268.1 347 46.7
Gohir.D13G235800 Gossypium hirsutum HOM05D004791 ORTHO05D005637 1.2e-69 267.7 345 47.2
Cc01_g15680 Coffea canephora HOM05D004791 ORTHO05D005637 1.6e-69 267.3 198 70.7
Gorai.004G001600 Gossypium raimondii HOM05D004791 ORTHO05D005637 1.6e-69 267.3 345 47.5
Atru.chr3.2946 Acer truncatum HOM05D004791 ORTHO05D005637 2.8e-69 266.5 345 47.0
Gorai.013G266500 Gossypium raimondii HOM05D004791 ORTHO05D005637 2.8e-69 266.5 351 47.9
Cfa010279 Carpinus fangiana HOM05D004791 ORTHO05D005637 3.6e-69 266.2 348 47.7
Gohir.D08G008400 Gossypium hirsutum HOM05D004791 ORTHO05D005637 4.7e-69 265.8 345 47.2
MD07G1051600 Malus domestica HOM05D004791 ORTHO05D005637 4.7e-69 265.8 343 46.6
PSO732G0764 Papaver somniferum HOM05D004791 ORTHO05D005637 4.7e-69 265.8 342 47.7
THA.LOC104800478 Tarenaya hassleriana HOM05D004791 ORTHO05D005637 4.7e-69 265.8 195 69.7
ClCG02G024120 Citrullus lanatus HOM05D004791 ORTHO05D005637 1.1e-68 264.6 347 47.6
FAN16G2039 Fragaria x ananassa HOM05D004791 ORTHO05D005637 1.1e-68 264.6 343 46.9
Thecc.09G339600 Theobroma cacao HOM05D004791 ORTHO05D005637 1.8e-68 263.8 345 48.1
AUR62007743 Chenopodium quinoa HOM05D004791 ORTHO05D005637 3.1e-68 263.1 341 45.5
CiPaw.13G121900 Carya illinoinensis HOM05D004791 ORTHO05D005637 4.0e-68 262.7 363 47.7
arahy.Tifrunner.gnm1.ann1.7GTL8A Arachis hypogaea HOM05D004791 ORTHO05D005637 5.2e-68 262.3 365 45.8
arahy.Tifrunner.gnm1.ann1.FGXA9Q Arachis hypogaea HOM05D004791 ORTHO05D005637 6.8e-68 261.9 365 45.8
Nitab4.5_0004383g0040 Nicotiana tabacum HOM05D004791 ORTHO05D005637 6.8e-68 261.9 301 50.2
AUR62002934 Chenopodium quinoa HOM05D004791 ORTHO05D005637 1.2e-67 261.2 341 45.7
Sed0001715 Sechium edule HOM05D004791 ORTHO05D005637 1.2e-67 261.2 348 45.4
Carub.0004s0745 Capsella rubella HOM05D004791 ORTHO05D005637 2.0e-67 260.4 190 67.9
Migut.N00694 Erythranthe guttata HOM05D004791 ORTHO05D005637 2.0e-67 260.4 344 45.1
CDE08G0165 Ceratophyllum demersum HOM05D004791 ORTHO05D005637 2.6e-67 260.0 345 45.8
Sopen09g012370 Solanum pennellii HOM05D004791 ORTHO05D005637 4.4e-67 259.2 361 46.5
Ciclev10016367m.g Citrus clementina HOM05D004791 ORTHO05D005637 7.5e-67 258.5 347 48.7
Glyma.14G040400 Glycine max HOM05D004791 ORTHO05D005637 7.5e-67 258.5 346 45.7
Lalb_Chr04g0249551 Lupinus albus HOM05D004791 ORTHO05D005637 7.5e-67 258.5 345 45.8
TWI79G1652 Tripterygium wilfordii HOM05D004791 ORTHO05D005637 7.5e-67 258.5 198 68.2
BraA09t35872Z Brassica rapa HOM05D004791 ORTHO05D005637 1.3e-66 257.7 339 46.3
AL4G20260 Arabidopsis lyrata HOM05D004791 ORTHO05D005637 1.7e-66 257.3 341 46.9
A09p02230 Brassica napus HOM05D004791 ORTHO05D005637 3.7e-66 256.1 339 46.0
C09p02320 Brassica napus HOM05D004791 ORTHO05D005637 3.7e-66 256.1 342 46.2
VMungo0647G0403 Vigna mungo HOM05D004791 ORTHO05D005637 4.9e-66 255.8 347 46.7
BcaB01g01998 Brassica carinata HOM05D004791 ORTHO05D005637 6.4e-66 255.4 338 46.7
CsaV3_4G023210 Cucumis sativus L. HOM05D004791 ORTHO05D005637 1.4e-65 254.2 347 46.7
THA.LOC104816959 Tarenaya hassleriana HOM05D004791 ORTHO05D005637 1.4e-65 254.2 196 68.4
BolC9t53160H Brassica oleracea HOM05D004791 ORTHO05D005637 2.4e-65 253.4 344 45.1
Glyma.02G275700 Glycine max HOM05D004791 ORTHO05D005637 2.4e-65 253.4 347 45.2
CDE09G0384 Ceratophyllum demersum HOM05D004791 ORTHO05D005637 3.2e-65 253.1 345 45.8
Thhalv10002092m.g Eutrema salsugineum HOM05D004791 ORTHO05D005637 3.2e-65 253.1 344 44.8
BcaC04g24019 Brassica carinata HOM05D004791 ORTHO05D005637 4.1e-65 252.7 344 45.1
Sp4g08380 Schrenkiella parvula HOM05D004791 ORTHO05D005637 5.4e-65 252.3 345 45.8
Medtr5g088337 Medicago truncatula HOM05D004791 ORTHO05D005637 7.0e-65 251.9 346 44.8
CARHR119150 Cardamine hirsuta HOM05D004791 ORTHO05D005637 1.6e-64 250.8 339 44.2
Lsat_1_v5_gn_9_15660 Lactuca sativa HOM05D004791 ORTHO05D005637 2.0e-64 250.4 350 45.1
MELO3C014695.2 Cucumis melo HOM05D004791 ORTHO05D005637 2.7e-64 250.0 347 44.7
Prupe.2G051000 Prunus persica HOM05D004791 ORTHO05D005637 6.0e-64 248.8 192 66.1
AT2G26970 Arabidopsis thaliana HOM05D004791 ORTHO05D005637 2.3e-63 246.9 341 43.7
EL10Ac6g14521 Beta vulgaris HOM05D004791 ORTHO05D005637 4.3e-62 242.7 341 44.3
Os02g0465500 Oryza sativa ssp. japonica HOM05D004791 ORTHO05D005637 1.8e-60 237.3 350 44.0
Zm00001eb240820 Zea mays HOM05D004791 ORTHO05D005637 2.9e-58 229.9 344 42.4
Rhsim11G0123600 Rhododendron simsii HOM05D004791 ORTHO05D005637 2.4e-57 226.9 341 44.9
Rhsim13G0056300 Rhododendron simsii HOM05D004791 ORTHO05D005637 2.4e-57 226.9 441 39.9
ECA247G3547 Erigeron canadensis HOM05D004791 ORTHO05D005637 9.2e-57 224.9 195 59.5
Duzib168G2260 Durio zibethinus HOM05D004791 ORTHO05D005637 2.1e-56 223.8 192 61.5
Peaxi162Scf00293g00320 Petunia axillaris HOM05D004791 ORTHO05D005637 7.8e-56 221.9 170 67.1
Prupe.2G053500 Prunus persica HOM05D004791 ORTHO05D005637 5.6e-54 215.7 298 47.0
SEGI_38815 Sequoiadendron giganteum HOM05D004791 ORTHO05D005637 7.3e-54 215.3 348 39.9
HPP92_004833 Vanilla planifolia HOM05D004791 ORTHO05D005637 7.3e-54 215.3 189 60.8
HPP92_004836 Vanilla planifolia HOM05D004791 ORTHO05D005637 7.3e-54 215.3 187 60.4
HanXRQChr08g0230971 Helianthus annuus HOM05D004791 ORTHO05D005637 1.2e-53 214.5 198 59.1
HanXRQChr08g0230941 Helianthus annuus HOM05D004791 ORTHO05D005637 2.8e-53 213.4 198 58.6
ATR0661G342 Amborella trichopoda HOM05D004791 ORTHO05D005637 2.4e-52 210.3 304 43.4
Phvul.008G205900 Phaseolus vulgaris HOM05D004791 ORTHO05D005637 4.4e-51 206.1 300 43.7
SEGI_08759 Sequoiadendron giganteum HOM05D004791 ORTHO05D005637 4.4e-51 206.1 194 55.2
Mapoly0089s0044 Marchantia polymorpha HOM05D004791 ORTHO05D005637 6.4e-50 202.2 194 54.1
MBI06_g07515_MAGBIO Magnolia biondii HOM05D004791 ORTHO05D005637 2.1e-48 197.2 269 46.5
COL.COLO4_18343 Corchorus olitorius HOM05D004791 ORTHO05D005637 7.8e-48 195.3 345 39.7
Pp3c15_14440 Physcomitrium patens HOM05D004791 ORTHO05D005637 2.1e-45 187.2 192 52.1
SMO361G0388 Selaginella moellendorffii HOM05D004791 ORTHO05D005637 4.7e-45 186.0 192 53.6
Pp3c9_12520 Physcomitrium patens HOM05D004791 ORTHO05D005637 3.2e-41 173.3 196 49.0
CANSAT54G2396 Cannabis sativa HOM05D004791 ORTHO05D005637 6.0e-40 169.1 270 39.3
Psat2g021120 Pisum sativum HOM05D004791 ORTHO05D005637 1.0e-39 168.3 271 41.7
Dinv00703 Davidia involucrata HOM05D004791 ORTHO05D005637 2.3e-39 167.2 250 43.6
Dinv18272 Davidia involucrata HOM05D004791 ORTHO05D005637 3.9e-39 166.4 239 44.4
Duzib170G0202 Durio zibethinus HOM05D004791 ORTHO05D005637 1.3e-37 161.4 266 42.9
QL01p007413 Quercus lobata HOM05D004791 ORTHO05D005637 2.1e-37 160.6 118 66.9
Lalb_Chr04g0249561 Lupinus albus HOM05D004791 ORTHO05D005637 4.0e-36 156.4 125 64.0
Solyc09g018780.4 Solanum lycopersicum HOM05D004791 ORTHO05D005637 2.2e-34 150.6 133 66.2
Nn7g38012 Nelumbo nucifera HOM05D004791 ORTHO05D005637 6.4e-34 149.1 243 41.6
PRCOL_00004118 Prasinoderma coloniale HOM05D004791 ORTHO05D005637 1.1e-33 148.3 196 43.4
Cre10.g425800 Chlamydomonas reinhardtii HOM05D004791 ORTHO05D005637 3.2e-33 146.7 190 42.1
TPR.G11322 Trifolium pratense HOM05D004791 ORTHO05D005637 1.1e-30 138.3 109 64.2
MSTRG.18521 Avicennia marina HOM05D004791 ORTHO05D005637 2.8e-29 133.7 153 51.6
TPR.G27619 Trifolium pratense HOM05D004791 ORTHO05D005637 1.8e-28 131.0 242 38.0
BolC9t53165H Brassica oleracea HOM05D004791 ORTHO05D005637 1.5e-27 127.9 150 48.7
Haze_23696 Corylus avellana HOM05D004791 ORTHO05D005637 1.7e-26 124.4 239 38.5
C09p02340 Brassica napus HOM05D004791 ORTHO05D005637 4.2e-25 119.8 120 55.0
BcaC04g24021 Brassica carinata HOM05D004791 ORTHO05D005637 1.2e-24 118.2 127 50.4
Solyc09g018760.2 Solanum lycopersicum HOM05D004791 ORTHO05D005637 2.7e-24 117.1 239 36.8
FAN11G2354 Fragaria x ananassa HOM05D004791 ORTHO05D005637 3.9e-23 113.2 266 35.0
Cfa021416 Carpinus fangiana HOM05D004791 ORTHO05D005637 1.5e-22 111.3 196 38.3
C03p32150 Brassica napus HOM05D004791 ORTHO05D005637 1.5e-19 101.3 156 44.2
BolC3t15557H Brassica oleracea HOM05D004791 ORTHO05D005637 1.5e-19 101.3 156 44.2
MBI06_g07516_MAGBIO Magnolia biondii HOM05D004791 ORTHO05D005637 4.5e-19 99.8 73 65.8
DCAR_012715 Daucus carota HOM05D004791 ORTHO05D005637 2.1e-16 90.9 76 63.2
HanXRQChr08g0230961 Helianthus annuus HOM05D004791 ORTHO05D005637 4.6e-16 89.7 56 69.6
AL1G12420 Arabidopsis lyrata HOM05D004791 ORTHO05D005637 1.0e-15 88.6 72 61.1
HanXRQChr08g0230891 Helianthus annuus HOM05D004791 ORTHO05D005637 1.3e-15 88.2 51 72.5
HanXRQChr08g0230951 Helianthus annuus HOM05D004791 ORTHO05D005637 8.7e-15 85.5 78 61.5
Peaxi162Scf01280g00024 Petunia axillaris HOM05D004791 ORTHO05D005637 2.8e-13 80.5 192 34.4
DCAR_012716 Daucus carota HOM05D004791 ORTHO05D005637 2.0e-11 74.3 60 65.0
Oeu020446.1 Olea europaea HOM05D004791 ORTHO05D005637 1.8e-07 61.2 84 46.4
Nitab4.5_0005144g0040 Nicotiana tabacum HOM05D004019 ORTHO05D005136 3.0e-07 60.5 38 81.6


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