Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1102G26 Lonicera japonica HOM05D007641 ORTHO05D007630 3.4e-200 701.4 354 100.0
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 2.2e-74 283.5 385 48.3
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 7.5e-54 215.3 358 41.3
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 2.7e-43 180.3 364 37.4
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 5.8e-38 162.5 287 38.3
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 1.5e-33 147.9 369 33.9
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 2.5e-33 147.1 335 34.9
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 2.1e-27 127.5 367 32.2
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 1.9e-25 120.9 311 34.7
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 1.8e-23 114.4 385 32.7
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.8e-23 114.4 416 31.2
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 6.4e-21 105.9 360 28.9
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 1.9e-20 104.4 367 31.6
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 7.1e-20 102.4 355 31.0
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 1.6e-19 101.3 317 31.9
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 2.3e-18 97.4 388 30.2
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 7.3e-17 92.4 376 27.9
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 1.2e-16 91.7 319 32.3
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 6.2e-16 89.4 367 29.4
TAR636G0755 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.5e-14 84.7 166 39.8
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 7.6e-14 82.4 323 29.1
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 4.9e-13 79.7 336 28.6
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 4.2e-12 76.6 329 29.2
Gohir.1Z049434 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.2e-11 75.1 332 30.7
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 1.2e-11 75.1 332 30.7
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 2.1e-11 74.3 287 30.7
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 4.6e-11 73.2 308 29.5
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 6.0e-11 72.8 377 27.3
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 6.0e-11 72.8 343 26.8
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 6.6e-10 69.3 324 26.2
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.5e-09 67.4 239 32.2
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 2.5e-09 67.4 389 27.0
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 1.6e-08 64.7 328 28.4
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.4e-07 61.6 330 28.5
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 4.0e-07 60.1 331 27.8
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 5.3e-07 59.7 328 27.7
PGSC0003DMG401006272 Solanum tuberosum HOM05D014625 ORTHO05D007630 6.9e-07 59.3 279 28.3
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 1.5e-06 58.2 334 26.9
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 2.6e-06 57.4 258 28.3
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 3.4e-06 57.0 358 27.1
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 4.5e-06 56.6 324 25.0


User provided reference genes

Program Settings