Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A109G39 Lonicera japonica HOM05D004125 ORTHO05D004933 3.0e-56 221.5 103 100.0
Lj2A109G40 Lonicera japonica HOM05D004125 ORTHO05D004933 1.1e-40 169.9 181 55.2
VMungo1383G2095 Vigna mungo HOM05D004125 ORTHO05D004933 7.5e-31 137.1 144 52.8
MD04G1102200 Malus domestica HOM05D004125 ORTHO05D004933 2.9e-30 135.2 145 52.4
Glyma.19G179500 Glycine max HOM05D004125 ORTHO05D004933 3.7e-30 134.8 144 52.1
CANSAT80G2417 Cannabis sativa HOM05D004125 ORTHO05D004933 8.3e-30 133.7 145 51.0
Lj1g0007543 Lotus japonicus HOM05D004125 ORTHO05D004933 8.3e-30 133.7 144 52.1
Phvul.001G175500 Phaseolus vulgaris HOM05D004125 ORTHO05D004933 8.3e-30 133.7 144 51.4
Gorai.009G419400 Gossypium raimondii HOM05D004125 ORTHO05D004933 1.1e-29 133.3 145 52.4
Actinidia13097 Actinidia chinensis HOM05D004125 ORTHO05D004933 1.9e-29 132.5 146 50.0
Glyma.03G178800 Glycine max HOM05D004125 ORTHO05D004933 1.9e-29 132.5 144 51.4
MD12G1121900 Malus domestica HOM05D004125 ORTHO05D004933 3.2e-29 131.7 145 51.7
Prupe.6G240600 Prunus persica HOM05D004125 ORTHO05D004933 3.2e-29 131.7 145 52.4
Cc06_g03700 Coffea canephora HOM05D004125 ORTHO05D004933 4.1e-29 131.3 145 51.0
Duzib128G0675 Durio zibethinus HOM05D004125 ORTHO05D004933 4.1e-29 131.3 145 50.3
Thecc.05G056000 Theobroma cacao HOM05D004125 ORTHO05D004933 5.4e-29 131.0 145 50.3
Dinv35730 Davidia involucrata HOM05D004125 ORTHO05D004933 7.1e-29 130.6 156 48.7
Manes.09G077179 Manihot esculenta HOM05D004125 ORTHO05D004933 7.1e-29 130.6 145 49.7
TWI53G0971 Tripterygium wilfordii HOM05D004125 ORTHO05D004933 9.2e-29 130.2 145 51.0
DCAR_014971 Daucus carota HOM05D004125 ORTHO05D004933 2.7e-28 128.6 138 50.0
Manes.08G004600 Manihot esculenta HOM05D004125 ORTHO05D004933 2.7e-28 128.6 144 49.3
Peaxi162Scf00005g03811 Petunia axillaris HOM05D004125 ORTHO05D004933 2.7e-28 128.6 144 50.7
TAR633G1040 Trochodendron aralioides HOM05D004125 ORTHO05D004933 2.7e-28 128.6 146 49.3
Ciclev10012548m.g Citrus clementina HOM05D004125 ORTHO05D004933 3.5e-28 128.3 145 50.3
Actinidia05264 Actinidia chinensis HOM05D004125 ORTHO05D004933 6.0e-28 127.5 146 49.3
Potri.016G087200 Populus trichocarpa HOM05D004125 ORTHO05D004933 6.0e-28 127.5 145 50.3
CSS0018032 Camellia sinensis var. sinensis HOM05D004125 ORTHO05D004933 7.8e-28 127.1 146 49.3
CSS0038970 Camellia sinensis var. sinensis HOM05D004125 ORTHO05D004933 7.8e-28 127.1 146 48.6
COL.COLO4_27059 Corchorus olitorius HOM05D004125 ORTHO05D004933 1.0e-27 126.7 145 49.7
Hma1.2p1_0614F.1_g189600 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 1.0e-27 126.7 146 48.6
Oeu059982.1 Olea europaea HOM05D004125 ORTHO05D004933 1.0e-27 126.7 145 48.3
TPR.G18284 Trifolium pratense HOM05D004125 ORTHO05D004933 1.0e-27 126.7 149 50.3
Migut.J00424 Erythranthe guttata HOM05D004125 ORTHO05D004933 1.3e-27 126.3 145 49.7
Lalb_Chr20g0112841 Lupinus albus HOM05D004125 ORTHO05D004933 1.3e-27 126.3 146 48.6
SalBow3G3732 Salvia bowleyana HOM05D004125 ORTHO05D004933 1.3e-27 126.3 144 49.3
TWI74G1587 Tripterygium wilfordii HOM05D004125 ORTHO05D004933 1.3e-27 126.3 145 51.0
DCAR_017716 Daucus carota HOM05D004125 ORTHO05D004933 1.7e-27 125.9 146 49.3
Ca_08833_v3 Cicer arietinum L. HOM05D004125 ORTHO05D004933 2.3e-27 125.6 144 50.0
Potri.006G130300 Populus trichocarpa HOM05D004125 ORTHO05D004933 2.3e-27 125.6 145 48.3
CAN.G1091.11 Capsicum annuum HOM05D004125 ORTHO05D004933 3.0e-27 125.2 144 50.0
Gohir.A04G075700 Gossypium hirsutum HOM05D004125 ORTHO05D004933 3.0e-27 125.2 145 50.3
Gohir.D04G114800 Gossypium hirsutum HOM05D004125 ORTHO05D004933 5.1e-27 124.4 145 51.0
Atru.chr8.1894 Acer truncatum HOM05D004125 ORTHO05D004933 6.6e-27 124.0 145 46.9
Medtr7g100870 Medicago truncatula HOM05D004125 ORTHO05D004933 6.6e-27 124.0 145 49.0
Sopen09g002360 Solanum pennellii HOM05D004125 ORTHO05D004933 6.6e-27 124.0 144 50.0
Nn2g10707 Nelumbo nucifera HOM05D004125 ORTHO05D004933 1.1e-26 123.2 144 47.9
PGSC0003DMG400001744 Solanum tuberosum HOM05D004125 ORTHO05D004933 1.1e-26 123.2 144 50.0
MSTRG.19144 Avicennia marina HOM05D004125 ORTHO05D004933 2.5e-26 122.1 144 49.3
CiPaw.09G178600 Carya illinoinensis HOM05D004125 ORTHO05D004933 2.5e-26 122.1 144 49.3
Duzib106G0069 Durio zibethinus HOM05D004125 ORTHO05D004933 2.5e-26 122.1 145 47.6
Gohir.A01G216300 Gossypium hirsutum HOM05D004125 ORTHO05D004933 2.5e-26 122.1 145 46.9
Gohir.D01G205100 Gossypium hirsutum HOM05D004125 ORTHO05D004933 2.5e-26 122.1 145 46.9
Gorai.002G249400 Gossypium raimondii HOM05D004125 ORTHO05D004933 4.3e-26 121.3 145 46.2
Sabra06G0102300 Salix brachista HOM05D004125 ORTHO05D004933 4.3e-26 121.3 154 44.8
Sabra16G0093400 Salix brachista HOM05D004125 ORTHO05D004933 4.3e-26 121.3 171 43.9
Atru.chr12.53 Acer truncatum HOM05D004125 ORTHO05D004933 7.3e-26 120.6 145 45.5
MELO3C014254.2 Cucumis melo HOM05D004125 ORTHO05D004933 7.3e-26 120.6 146 47.9
MSTRG.5726 Avicennia marina HOM05D004125 ORTHO05D004933 9.5e-26 120.2 145 48.3
Psat0s1011g0040 Pisum sativum HOM05D004125 ORTHO05D004933 9.5e-26 120.2 146 48.6
Oeu001336.1 Olea europaea HOM05D004125 ORTHO05D004933 1.2e-25 119.8 145 45.5
Sed0009991 Sechium edule HOM05D004125 ORTHO05D004933 1.2e-25 119.8 145 46.2
Solyc09g007490.3 Solanum lycopersicum HOM05D004125 ORTHO05D004933 1.2e-25 119.8 144 50.0
Nitab4.5_0000669g0120 Nicotiana tabacum HOM05D004125 ORTHO05D004933 3.6e-25 118.2 144 47.2
TAR636G1871 Trochodendron aralioides HOM05D004125 ORTHO05D004933 3.6e-25 118.2 146 47.3
Duzib093G1421 Durio zibethinus HOM05D004125 ORTHO05D004933 4.7e-25 117.9 145 46.9
Cfa017522 Carpinus fangiana HOM05D004125 ORTHO05D004933 6.2e-25 117.5 145 46.2
PGR004G0966 Punica granatum HOM05D004125 ORTHO05D004933 6.2e-25 117.5 146 46.6
Nn2g13030 Nelumbo nucifera HOM05D004125 ORTHO05D004933 8.1e-25 117.1 144 45.8
TAR623G1581 Trochodendron aralioides HOM05D004125 ORTHO05D004933 8.1e-25 117.1 143 49.0
Eucgr.A01169 Eucalyptus grandis HOM05D004125 ORTHO05D004933 1.1e-24 116.7 151 46.4
Nitab4.5_0006156g0040 Nicotiana tabacum HOM05D004125 ORTHO05D004933 1.1e-24 116.7 144 47.2
Sed0002474 Sechium edule HOM05D004125 ORTHO05D004933 1.1e-24 116.7 145 46.2
CsaV3_6G039390 Cucumis sativus L. HOM05D004125 ORTHO05D004933 1.4e-24 116.3 146 46.6
Nitab4.5_0003871g0020 Nicotiana tabacum HOM05D004125 ORTHO05D004933 1.8e-24 115.9 144 44.4
QL04p031281 Quercus lobata HOM05D004125 ORTHO05D004933 1.8e-24 115.9 145 46.2
QL07p045037 Quercus lobata HOM05D004125 ORTHO05D004933 1.8e-24 115.9 145 46.2
PSO384G3223 Papaver somniferum HOM05D004125 ORTHO05D004933 2.4e-24 115.5 146 44.5
Nitab4.5_0008568g0040 Nicotiana tabacum HOM05D004125 ORTHO05D004933 3.1e-24 115.2 144 44.4
Peaxi162Scf00472g00039 Petunia axillaris HOM05D004125 ORTHO05D004933 4.0e-24 114.8 144 43.1
PSO339G6461 Papaver somniferum HOM05D004125 ORTHO05D004933 1.2e-23 113.2 146 43.8
Aqoxy4G03230 Aquilegia oxysepala HOM05D004125 ORTHO05D004933 1.5e-23 112.8 146 45.2
Duzib093G1540 Durio zibethinus HOM05D004125 ORTHO05D004933 2.0e-23 112.5 145 45.5
THA.LOC104806497 Tarenaya hassleriana HOM05D004125 ORTHO05D004933 2.6e-23 112.1 144 44.4
EL10Ac7g16513 Beta vulgaris HOM05D004125 ORTHO05D004933 4.4e-23 111.3 144 45.1
ClCG04G008880 Citrullus lanatus HOM05D004125 ORTHO05D004933 5.8e-23 110.9 152 42.8
Aa31LG5G22400 Aethionema arabicum HOM05D004125 ORTHO05D004933 9.9e-23 110.2 144 43.8
PGR142G2082 Punica granatum HOM05D004125 ORTHO05D004933 2.2e-22 109.0 143 44.8
A03p20450 Brassica napus HOM05D004125 ORTHO05D004933 2.9e-22 108.6 144 43.1
BcaC01g05633 Brassica carinata HOM05D004125 ORTHO05D004933 3.8e-22 108.2 144 43.1
C03p24050 Brassica napus HOM05D004125 ORTHO05D004933 3.8e-22 108.2 144 43.1
BolC3t14795H Brassica oleracea HOM05D004125 ORTHO05D004933 3.8e-22 108.2 144 43.1
BraA03t11288Z Brassica rapa HOM05D004125 ORTHO05D004933 3.8e-22 108.2 144 43.1
SEGI_21681 Sequoiadendron giganteum HOM05D004125 ORTHO05D004933 4.9e-22 107.8 144 43.1
CARHR131620 Cardamine hirsuta HOM05D004125 ORTHO05D004933 6.4e-22 107.5 144 43.1
PSO063G5409 Papaver somniferum HOM05D004125 ORTHO05D004933 6.4e-22 107.5 146 43.8
A04p28380 Brassica napus HOM05D004125 ORTHO05D004933 1.1e-21 106.7 144 41.7
C04p65690 Brassica napus HOM05D004125 ORTHO05D004933 1.1e-21 106.7 144 41.7
Haze_20626 Corylus avellana HOM05D004125 ORTHO05D004933 1.1e-21 106.7 152 44.1
Sp4g19430 Schrenkiella parvula HOM05D004125 ORTHO05D004933 1.1e-21 106.7 144 42.4
AUR62040494 Chenopodium quinoa HOM05D004125 ORTHO05D004933 1.4e-21 106.3 140 44.3
BcaB06g28978 Brassica carinata HOM05D004125 ORTHO05D004933 3.2e-21 105.1 144 41.0
BcaC02g07548 Brassica carinata HOM05D004125 ORTHO05D004933 4.2e-21 104.8 144 41.0
BolC4t28068H Brassica oleracea HOM05D004125 ORTHO05D004933 4.2e-21 104.8 144 41.0
Thhalv10017172m.g Eutrema salsugineum HOM05D004125 ORTHO05D004933 4.2e-21 104.8 144 41.7
PSO339G6532 Papaver somniferum HOM05D004125 ORTHO05D004933 4.2e-21 104.8 143 43.4
BraA04t18316Z Brassica rapa HOM05D004125 ORTHO05D004933 5.4e-21 104.4 144 41.0
SGA_v2.0_scaffold126G33910 Striga asiatica HOM05D004125 ORTHO05D004933 5.4e-21 104.4 147 44.2
AL4G33460 Arabidopsis lyrata HOM05D004125 ORTHO05D004933 7.1e-21 104.0 144 41.7
BcaB01g03789 Brassica carinata HOM05D004125 ORTHO05D004933 9.2e-21 103.6 145 42.8
Sc07g0006290 Simmondsia chinensis HOM05D004125 ORTHO05D004933 9.2e-21 103.6 144 41.7
Solyc10g084260.3 Solanum lycopersicum HOM05D004125 ORTHO05D004933 9.2e-21 103.6 144 40.3
Zm00001eb123690 Zea mays HOM05D004125 ORTHO05D004933 9.2e-21 103.6 146 41.1
Sopen10g033700 Solanum pennellii HOM05D004125 ORTHO05D004933 1.2e-20 103.2 144 39.6
Carub.0004s1900 Capsella rubella HOM05D004125 ORTHO05D004933 2.1e-20 102.4 143 41.3
Migut.L01669 Erythranthe guttata HOM05D004125 ORTHO05D004933 2.7e-20 102.1 145 44.8
AT2G37110 Arabidopsis thaliana HOM05D004125 ORTHO05D004933 3.5e-20 101.7 144 41.0
Lsat_1_v5_gn_6_30280 Lactuca sativa HOM05D004125 ORTHO05D004933 3.5e-20 101.7 147 43.5
CAN.G915.16 Capsicum annuum HOM05D004125 ORTHO05D004933 6.0e-20 100.9 144 39.6
ECA233G4685 Erigeron canadensis HOM05D004125 ORTHO05D004933 6.0e-20 100.9 144 39.6
PGSC0003DMG400010481 Solanum tuberosum HOM05D004125 ORTHO05D004933 6.0e-20 100.9 144 39.6
FvH4_6g15540 Fragaria vesca HOM05D004125 ORTHO05D004933 1.0e-19 100.1 143 43.4
CDE07G0936 Ceratophyllum demersum HOM05D004125 ORTHO05D004933 3.0e-19 98.6 144 40.3
RcHm_v2.0_Chr3g0469051 Rosa chinensis HOM05D004125 ORTHO05D004933 3.0e-19 98.6 143 43.4
CDE04G0632 Ceratophyllum demersum HOM05D004125 ORTHO05D004933 1.1e-18 96.7 144 40.3
Lj3C980T5 Lonicera japonica HOM05D004125 ORTHO05D004933 1.9e-18 95.9 132 47.0
Os01g0157900 Oryza sativa ssp. japonica HOM05D004125 ORTHO05D004933 2.5e-18 95.5 145 39.3
FAN02G0333 Fragaria x ananassa HOM05D004125 ORTHO05D004933 5.6e-18 94.4 146 42.5
FAN09G3242 Fragaria x ananassa HOM05D004125 ORTHO05D004933 5.6e-18 94.4 146 42.5
HanXRQChr13g0399591 Helianthus annuus HOM05D004125 ORTHO05D004933 1.3e-17 93.2 145 42.8
THA.LOC104823453 Tarenaya hassleriana HOM05D004125 ORTHO05D004933 1.6e-17 92.8 144 41.0
FAN14G3382 Fragaria x ananassa HOM05D004125 ORTHO05D004933 6.2e-17 90.9 166 38.0
SGA_v2.0_scaffold94G28676 Striga asiatica HOM05D004125 ORTHO05D004933 1.5e-15 86.3 134 40.3
SalBow5G0726 Salvia bowleyana HOM05D004125 ORTHO05D004933 2.0e-15 85.9 146 38.4
Ah.15g092190 Amaranthus hybridus HOM05D004125 ORTHO05D004933 3.4e-15 85.1 125 40.8
HPP92_012053 Vanilla planifolia HOM05D004125 ORTHO05D004933 9.9e-15 83.6 143 38.5
Hma1.2p1_0111F.1_g054010 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 2.2e-14 82.4 38 97.4
Dinv37266 Davidia involucrata HOM05D004125 ORTHO05D004933 6.4e-14 80.9 38 94.7
Rhsim04G0149200 Rhododendron simsii HOM05D004125 ORTHO05D004933 5.4e-13 77.8 38 89.5
SalBow5G2572 Salvia bowleyana HOM05D004125 ORTHO05D004933 1.6e-12 76.3 171 32.2
unitig_0.g689 Utricularia gibba HOM05D004125 ORTHO05D004933 2.1e-12 75.9 92 44.6
arahy.Tifrunner.gnm1.ann1.DS9KFU Arachis hypogaea HOM05D004125 ORTHO05D004933 2.7e-12 75.5 38 86.8
arahy.Tifrunner.gnm1.ann1.SDZN59 Arachis hypogaea HOM05D004125 ORTHO05D004933 2.7e-12 75.5 38 86.8
CiPaw.10G136300 Carya illinoinensis HOM05D004125 ORTHO05D004933 2.7e-12 75.5 38 89.5
CiPaw.10G136500 Carya illinoinensis HOM05D004125 ORTHO05D004933 2.7e-12 75.5 38 89.5
Oeu014972.1 Olea europaea HOM05D004125 ORTHO05D004933 3.5e-12 75.1 38 86.8
vmacro08723 Vaccinium macrocarpon HOM05D004125 ORTHO05D004933 1.3e-11 73.2 38 84.2
RhsimUnG0115400 Rhododendron simsii HOM05D004125 ORTHO05D004933 3.9e-11 71.6 38 84.2
Gohir.D11G343850 Gossypium hirsutum HOM05D004125 ORTHO05D004933 5.1e-11 71.2 38 81.6
arahy.Tifrunner.gnm1.ann1.05RLXM Arachis hypogaea HOM05D004125 ORTHO05D004933 8.7e-11 70.5 93 43.0
vmacro20050 Vaccinium macrocarpon HOM05D004125 ORTHO05D004933 1.1e-10 70.1 38 81.6
Gohir.A11G324600 Gossypium hirsutum HOM05D004125 ORTHO05D004933 1.5e-10 69.7 38 78.9
Gorai.007G374200 Gossypium raimondii HOM05D004125 ORTHO05D004933 2.5e-10 68.9 38 78.9
Mapoly0052s0073 Marchantia polymorpha HOM05D004125 ORTHO05D004933 5.6e-10 67.8 92 39.1
Cfa017523 Carpinus fangiana HOM05D004125 ORTHO05D004933 9.6e-10 67.0 46 67.4
SalBow5G1492 Salvia bowleyana HOM05D004125 ORTHO05D004933 1.3e-09 66.6 118 37.3
Hma1.2p1_0614F.1_g189590 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 2.1e-09 65.9 80 45.0
Hma1.2p1_0614F.1_g189605 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 2.1e-09 65.9 80 45.0
FAN05G0570 Fragaria x ananassa HOM05D004125 ORTHO05D004933 1.4e-08 63.2 39 76.9
arahy.Tifrunner.gnm1.ann1.X8Y7H8 Arachis hypogaea HOM05D004125 ORTHO05D004933 4.0e-08 61.6 79 48.1
ATR0594G238 Amborella trichopoda HOM05D004125 ORTHO05D004933 2.2e-06 55.8 145 30.3
Pp3c2_28280 Physcomitrium patens HOM05D004125 ORTHO05D004933 2.2e-06 55.8 46 56.5


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