Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1092G48 Lonicera japonica HOM05D000033 ORTHO05D235398 2.5e-84 315.8 217 100.0
Lj1A962T106 Lonicera japonica HOM05D000033 ORTHO05D002478 1.2e-17 94.4 94 60.6
Aqoxy1G01285 Aquilegia oxysepala HOM05D000033 ORTHO05D002478 3.2e-15 86.3 85 60.0
PSO765G0166 Papaver somniferum HOM05D000033 ORTHO05D002478 2.0e-12 77.0 86 55.8
Ah.10g036120 Amaranthus hybridus HOM05D000033 ORTHO05D002478 2.6e-12 76.6 84 52.4
Lalb_Chr10g0105321 Lupinus albus HOM05D000033 ORTHO05D002478 7.4e-12 75.1 90 48.9
arahy.Tifrunner.gnm1.ann1.1B3Y49 Arachis hypogaea HOM05D000033 ORTHO05D002478 2.2e-11 73.6 88 54.5
arahy.Tifrunner.gnm1.ann1.AT476Q Arachis hypogaea HOM05D000033 ORTHO05D002478 2.2e-11 73.6 88 54.5
arahy.Tifrunner.gnm1.ann1.V5ZBYQ Arachis hypogaea HOM05D000033 ORTHO05D002478 2.2e-11 73.6 88 54.5
Ah.12g059060 Amaranthus hybridus HOM05D000033 ORTHO05D002478 4.1e-10 69.3 89 51.7
Hund14927 Selenicereus undatus HOM05D000033 ORTHO05D002478 4.1e-10 69.3 76 53.9
Aa31LG10G11010 Aethionema arabicum HOM05D000033 ORTHO05D002478 9.1e-10 68.2 88 54.5
GSVIVG01032740001 Vitis vinifera HOM05D000033 ORTHO05D002478 4.5e-09 65.9 68 60.3
Actinidia20767 Actinidia chinensis HOM05D000033 ORTHO05D002478 5.9e-09 65.5 83 50.6
CARHR161370 Cardamine hirsuta HOM05D000033 ORTHO05D002478 5.9e-09 65.5 67 53.7
Ciclev10030707m.g Citrus clementina HOM05D000033 ORTHO05D002478 7.7e-09 65.1 83 50.6
BraA04t16122Z Brassica rapa HOM05D000033 ORTHO05D002478 1.0e-08 64.7 97 47.4
vmacro06941 Vaccinium macrocarpon HOM05D000033 ORTHO05D002478 1.7e-08 63.9 54 66.7
MD07G1228100 Malus domestica HOM05D000033 ORTHO05D002478 2.2e-08 63.5 86 47.7
Nitab4.5_0002854g0020 Nicotiana tabacum HOM05D000033 ORTHO05D002478 2.9e-08 63.2 52 63.5
Thhalv10006389m.g Eutrema salsugineum HOM05D000490 ORTHO05D002478 6.5e-08 62.0 70 58.6
A04p04020 Brassica napus HOM05D000033 ORTHO05D002478 1.9e-07 60.5 86 50.0
Carub.0005s2285 Capsella rubella HOM05D000033 ORTHO05D002478 1.9e-07 60.5 83 47.0
CAN.G1413.1 Capsicum annuum HOM05D000033 ORTHO05D002478 1.9e-07 60.5 82 48.8
Cc02_g05940 Coffea canephora HOM05D000033 ORTHO05D002478 1.9e-07 60.5 85 47.1
Nitab4.5_0004167g0030 Nicotiana tabacum HOM05D000033 ORTHO05D002478 1.9e-07 60.5 51 62.7
TPR.G8344 Trifolium pratense HOM05D000033 ORTHO05D002478 1.9e-07 60.5 64 59.4
TAR623G0103 Trochodendron aralioides HOM05D000033 ORTHO05D002478 1.9e-07 60.5 78 46.2
AL5G37420 Arabidopsis lyrata HOM05D000033 ORTHO05D002478 2.5e-07 60.1 62 58.1
Peaxi162Scf00284g00224 Petunia axillaris HOM05D000033 ORTHO05D002478 2.5e-07 60.1 54 63.0
Sopen09g008450 Solanum pennellii HOM05D000033 ORTHO05D002478 2.5e-07 60.1 60 56.7
DCAR_011855 Daucus carota HOM05D000033 ORTHO05D002478 3.2e-07 59.7 50 66.0
Glyma.02G261400 Glycine max HOM05D000033 ORTHO05D002478 3.2e-07 59.7 87 46.0
Gohir.A10G237800 Gossypium hirsutum HOM05D000033 ORTHO05D002478 3.2e-07 59.7 56 60.7
Hma1.2p1_1013F.1_g247660 Hydrangea macrophylla HOM05D000033 ORTHO05D002478 3.2e-07 59.7 85 45.9
Migut.F01465 Erythranthe guttata HOM05D000033 ORTHO05D002478 4.2e-07 59.3 56 58.9
Solyc06g050560.3 Solanum lycopersicum HOM05D000033 ORTHO05D002478 4.2e-07 59.3 51 66.7
PSO384G0132 Papaver somniferum HOM05D000033 ORTHO05D002478 5.5e-07 58.9 85 42.4
Duzib114G0285 Durio zibethinus HOM05D000033 ORTHO05D002478 7.2e-07 58.5 55 60.0
MD01G1159600 Malus domestica HOM05D000033 ORTHO05D002478 7.2e-07 58.5 87 46.0
Nitab4.5_0011886g0020 Nicotiana tabacum HOM05D000033 ORTHO05D002478 7.2e-07 58.5 88 45.5
CDE04G3541 Ceratophyllum demersum HOM05D000033 ORTHO05D002478 9.4e-07 58.2 73 45.2
Sp5g06430 Schrenkiella parvula HOM05D000033 ORTHO05D002478 1.2e-06 57.8 84 48.8
Solyc09g015170.4 Solanum lycopersicum HOM05D000033 ORTHO05D002478 1.2e-06 57.8 60 55.0
COL.COLO4_25800 Corchorus olitorius HOM05D000033 ORTHO05D002478 1.6e-06 57.4 55 63.6
Duzib128G0476 Durio zibethinus HOM05D000033 ORTHO05D002478 1.6e-06 57.4 59 57.6
PGSC0003DMG400013198 Solanum tuberosum HOM05D000033 ORTHO05D002478 1.6e-06 57.4 60 55.0
BolC4t25153H Brassica oleracea HOM05D000033 ORTHO05D002478 2.1e-06 57.0 86 47.7
MSTRG.189 Avicennia marina HOM05D000033 ORTHO05D002478 2.7e-06 56.6 87 48.3
Gorai.011G289900 Gossypium raimondii HOM05D000033 ORTHO05D002478 2.7e-06 56.6 57 61.4
Nitab4.5_0000230g0240 Nicotiana tabacum HOM05D000033 ORTHO05D002478 2.7e-06 56.6 88 44.3
Phvul.008G220100 Phaseolus vulgaris HOM05D000033 ORTHO05D002478 2.7e-06 56.6 85 45.9
Rhsim04G0124800 Rhododendron simsii HOM05D000033 ORTHO05D002478 2.7e-06 56.6 55 63.6
VMungo0647G1636 Vigna mungo HOM05D000033 ORTHO05D002478 2.7e-06 56.6 82 43.9
Gohir.D06G166500 Gossypium hirsutum HOM05D000033 ORTHO05D002478 3.6e-06 56.2 58 60.3
Gorai.010G194100 Gossypium raimondii HOM05D000033 ORTHO05D002478 3.6e-06 56.2 58 60.3
vmacro08908 Vaccinium macrocarpon HOM05D000033 ORTHO05D002478 3.6e-06 56.2 59 54.2
PGSC0003DMG400023953 Solanum tuberosum HOM05D000033 ORTHO05D002478 4.7e-06 55.8 51 62.7
BcaC02g09802 Brassica carinata HOM05D000033 ORTHO05D002478 6.1e-06 55.5 60 56.7
C04p36420 Brassica napus HOM05D000033 ORTHO05D002478 6.1e-06 55.5 60 56.7
Hund10901 Selenicereus undatus HOM05D000033 ORTHO05D002478 6.1e-06 55.5 61 57.4
EL10Ac2g04907 Beta vulgaris HOM05D000033 ORTHO05D002478 7.9e-06 55.1 85 42.4
Lsat_1_v5_gn_5_149480 Lactuca sativa HOM05D000033 ORTHO05D002478 7.9e-06 55.1 59 57.6


User provided reference genes

Program Settings