Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1061T53 Lonicera japonica HOM05D000027 ORTHO05D235897 7.5e-99 364.0 204 100.0
Lj2C1072T5 Lonicera japonica HOM05D000027 ORTHO05D000500 3.0e-23 112.8 67 86.6
Lj2C1072T10 Lonicera japonica HOM05D000027 ORTHO05D000500 8.8e-15 84.7 69 59.4
Lj2A1072G117 Lonicera japonica HOM05D000027 ORTHO05D000500 1.7e-13 80.5 69 56.5
Lj2A1043T32 Lonicera japonica HOM05D000027 ORTHO05D000500 7.0e-12 75.1 99 43.4
Cc03_g09630 Coffea canephora HOM05D000027 ORTHO05D000500 2.0e-11 73.6 70 54.3
Lj2A1071T66 Lonicera japonica HOM05D000027 ORTHO05D000500 5.9e-11 72.0 99 42.4
Cc03_g09610 Coffea canephora HOM05D000027 ORTHO05D000500 1.0e-10 71.2 70 54.3
GSVIVG01024836001 Vitis vinifera HOM05D000027 ORTHO05D000500 3.6e-08 62.8 67 49.3
Ciclev10028405m.g Citrus clementina HOM05D000027 ORTHO05D000500 6.1e-08 62.0 64 50.0
Manes.01G100300 Manihot esculenta HOM05D000027 ORTHO05D000500 1.0e-07 61.2 70 42.9
Lj2A1071T67 Lonicera japonica HOM05D000027 ORTHO05D000500 1.4e-07 60.8 67 49.3
Hma1.2p1_0543F.1_g175380 Hydrangea macrophylla HOM05D000027 ORTHO05D000500 2.3e-07 60.1 65 49.2
Actinidia23909 Actinidia chinensis HOM05D000027 ORTHO05D000500 3.0e-07 59.7 69 49.3
CiPaw.13G086300 Carya illinoinensis HOM05D000027 ORTHO05D000500 3.0e-07 59.7 65 50.8
CiPaw.13G086700 Carya illinoinensis HOM05D000027 ORTHO05D000500 3.0e-07 59.7 67 49.3
FvH4_3g37310 Fragaria vesca HOM05D000027 ORTHO05D000500 3.0e-07 59.7 73 39.7
PGR119G1145 Punica granatum HOM05D000027 ORTHO05D000500 4.0e-07 59.3 68 44.1
Thecc.09G312800 Theobroma cacao HOM05D000027 ORTHO05D000500 5.2e-07 58.9 67 43.3
Lsat_1_v5_gn_9_25020 Lactuca sativa HOM05D000027 ORTHO05D000500 8.8e-07 58.2 65 44.6
Prupe.6G008400 Prunus persica HOM05D000027 ORTHO05D000500 8.8e-07 58.2 65 50.8
Cc02_g30770 Coffea canephora HOM05D000027 ORTHO05D000500 1.2e-06 57.8 69 46.4
PGR102G1427 Punica granatum HOM05D000027 ORTHO05D000500 1.5e-06 57.4 68 42.6
Prupe.6G008600 Prunus persica HOM05D000027 ORTHO05D000500 2.0e-06 57.0 65 49.2
Prupe.6G008700 Prunus persica HOM05D000027 ORTHO05D000500 2.0e-06 57.0 71 43.7
Sed0004745 Sechium edule HOM05D000027 ORTHO05D000500 2.0e-06 57.0 68 39.7
MD11G1090500 Malus domestica HOM05D000027 ORTHO05D000500 2.6e-06 56.6 67 49.3
Nn2g13538 Nelumbo nucifera HOM05D000027 ORTHO05D000500 2.6e-06 56.6 70 41.4
Ciclev10028419m.g Citrus clementina HOM05D000027 ORTHO05D000500 3.4e-06 56.2 64 48.4
MD11G1090200 Malus domestica HOM05D000027 ORTHO05D000500 3.4e-06 56.2 61 42.6
Cpa.g.sc81.42 Carica papaya HOM05D000027 ORTHO05D000500 4.4e-06 55.8 67 44.8
Eucgr.J01962 Eucalyptus grandis HOM05D000027 ORTHO05D000500 4.4e-06 55.8 69 40.6
FAN25G1717 Fragaria x ananassa HOM05D000027 ORTHO05D000500 4.4e-06 55.8 71 38.0
Prupe.6G008300 Prunus persica HOM05D000027 ORTHO05D000500 4.4e-06 55.8 65 47.7
Actinidia34436 Actinidia chinensis HOM05D000027 ORTHO05D000500 7.5e-06 55.1 68 41.2
ECA247G0192 Erigeron canadensis HOM05D000027 ORTHO05D000500 7.5e-06 55.1 65 44.6
Manes.02G125300 Manihot esculenta HOM05D000027 ORTHO05D000500 7.5e-06 55.1 66 43.9
Prupe.6G007700 Prunus persica HOM05D000027 ORTHO05D000500 9.8e-06 54.7 65 43.1


User provided reference genes

Program Settings