Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A105G63 Lonicera japonica HOM05D001127 ORTHO05D048453 2.6e-59 231.9 119 100.0
RhsimUnG0119900 Rhododendron simsii HOM05D001127 ORTHO05D048453 1.3e-10 70.1 63 61.9
Cc06_g03380 Coffea canephora HOM05D001127 ORTHO05D002230 1.6e-08 63.2 63 58.7
Nitab4.5_0000848g0020 Nicotiana tabacum HOM05D001127 ORTHO05D002230 2.7e-08 62.4 63 57.1
Nitab4.5_0004432g0010 Nicotiana tabacum HOM05D001127 ORTHO05D002230 2.7e-08 62.4 63 57.1
PGSC0003DMG401027896 Solanum tuberosum HOM05D001127 ORTHO05D002230 2.7e-08 62.4 63 57.1
Migut.L01649 Erythranthe guttata HOM05D001127 ORTHO05D002230 3.6e-08 62.0 109 40.4
Hma1.2p1_1158F.1_g262380 Hydrangea macrophylla HOM05D001127 ORTHO05D002230 6.1e-08 61.2 63 57.1
Sopen00g010770 Solanum pennellii HOM05D001127 ORTHO05D002230 7.9e-08 60.8 63 55.6
TAR623G0446 Trochodendron aralioides HOM05D001127 ORTHO05D002230 7.9e-08 60.8 63 55.6
CSS0013454 Camellia sinensis var. sinensis HOM05D001127 ORTHO05D002230 3.0e-07 58.9 31 83.9
CANSAT80G0329 Cannabis sativa HOM05D001127 ORTHO05D002230 3.0e-07 58.9 63 54.0
CDE09G1289 Ceratophyllum demersum HOM05D001127 ORTHO05D002230 3.9e-07 58.5 70 47.1
ATR0594G169 Amborella trichopoda HOM05D001127 ORTHO05D002230 5.1e-07 58.2 59 54.2
Cfa017482 Carpinus fangiana HOM05D001127 ORTHO05D002230 5.1e-07 58.2 63 52.4
Haze_20676 Corylus avellana HOM05D001127 ORTHO05D002230 5.1e-07 58.2 63 52.4
MD12G1129300 Malus domestica HOM05D001127 ORTHO05D002230 6.7e-07 57.8 63 50.8
Sabra08G0032900 Salix brachista HOM05D001127 ORTHO05D002230 6.7e-07 57.8 37 70.3
Lj5g0024475 Lotus japonicus HOM05D001127 ORTHO05D002230 8.8e-07 57.4 37 70.3
Sed0016528 Sechium edule HOM05D001127 ORTHO05D002230 1.1e-06 57.0 67 46.3
Hund19287 Selenicereus undatus HOM05D001127 ORTHO05D002230 1.5e-06 56.6 36 69.4
Solyc04g009560.3 Solanum lycopersicum HOM05D001127 ORTHO05D002230 1.5e-06 56.6 47 57.4
MSTRG.8157 Avicennia marina HOM05D001127 ORTHO05D002230 2.0e-06 56.2 37 67.6
Cc09_g02300 Coffea canephora HOM05D001127 ORTHO05D002230 2.0e-06 56.2 42 61.9
Hma1.2p1_0207F.1_g088050 Hydrangea macrophylla HOM05D001127 ORTHO05D002230 2.0e-06 56.2 37 70.3
Lj1C928T14 Lonicera japonica HOM05D001127 ORTHO05D002230 2.0e-06 56.2 44 59.1
SGA_v2.0_scaffold329G48854 Striga asiatica HOM05D001127 ORTHO05D002230 2.0e-06 56.2 37 67.6
Oeu057251.2 Olea europaea HOM05D001127 ORTHO05D002230 2.6e-06 55.8 37 67.6
Sopen04g004720 Solanum pennellii HOM05D001127 ORTHO05D002230 2.6e-06 55.8 56 53.6
SGA_v2.0_scaffold71G24031 Striga asiatica HOM05D001127 ORTHO05D002230 2.6e-06 55.8 34 73.5
TPR.G10432 Trifolium pratense HOM05D001127 ORTHO05D002230 2.6e-06 55.8 72 43.1
TWI53G1923 Tripterygium wilfordii HOM05D001127 ORTHO05D002230 2.6e-06 55.8 63 50.8
Thhalv10016235m.g Eutrema salsugineum HOM05D001127 ORTHO05D002230 3.3e-06 55.5 116 37.9
Glyma.10G294700 Glycine max HOM05D001127 ORTHO05D002230 3.3e-06 55.5 30 83.3
Glyma.20G244400 Glycine max HOM05D001127 ORTHO05D002230 3.3e-06 55.5 30 83.3
Lalb_Chr21g0307551 Lupinus albus HOM05D001127 ORTHO05D002230 3.3e-06 55.5 30 83.3
MBI14_g14542_MAGBIO Magnolia biondii HOM05D001127 ORTHO05D002230 3.3e-06 55.5 39 66.7
Medtr1g116310 Medicago truncatula HOM05D001127 ORTHO05D002230 3.3e-06 55.5 37 67.6
Phvul.007G005500 Phaseolus vulgaris HOM05D001127 ORTHO05D002230 3.3e-06 55.5 30 83.3
Sabra10G0166100 Salix brachista HOM05D001127 ORTHO05D002230 3.3e-06 55.5 37 67.6
VMungo0720G2317 Vigna mungo HOM05D001127 ORTHO05D002230 3.3e-06 55.5 30 83.3
GSVIVG01032641001 Vitis vinifera HOM05D001127 ORTHO05D002230 3.3e-06 55.5 71 46.5
Ah.15g092000 Amaranthus hybridus HOM05D001127 ORTHO05D002230 4.4e-06 55.1 65 47.7
AL5G26020 Arabidopsis lyrata HOM05D001127 ORTHO05D002230 4.4e-06 55.1 58 48.3
Haze_16959 Corylus avellana HOM05D001127 ORTHO05D002230 4.4e-06 55.1 63 50.8
MELO3C011716.2 Cucumis melo HOM05D001127 ORTHO05D002230 4.4e-06 55.1 37 67.6
CsaV3_5G006420 Cucumis sativus L. HOM05D001127 ORTHO05D002230 4.4e-06 55.1 37 67.6
Dinv31380 Davidia involucrata HOM05D001127 ORTHO05D002230 4.4e-06 55.1 39 71.8
Lj1A927T61 Lonicera japonica HOM05D001127 ORTHO05D002230 4.4e-06 55.1 42 59.5
SEGI_41029 Sequoiadendron giganteum HOM05D001127 ORTHO05D002230 4.4e-06 55.1 44 56.8
CiPaw.01G278600 Carya illinoinensis HOM05D001127 ORTHO05D002230 5.7e-06 54.7 41 61.0
Dinv25935 Davidia involucrata HOM05D001127 ORTHO05D002230 5.7e-06 54.7 33 75.8
Peaxi162Scf00195g00836 Petunia axillaris HOM05D001127 ORTHO05D002230 5.7e-06 54.7 42 59.5
QL08p057343 Quercus lobata HOM05D001127 ORTHO05D002230 5.7e-06 54.7 41 61.0
MSTRG.9190 Avicennia marina HOM05D001127 ORTHO05D002230 7.4e-06 54.3 37 64.9
Carub.0004s1920 Capsella rubella HOM05D001127 ORTHO05D002230 7.4e-06 54.3 68 47.1
Cfa001570 Carpinus fangiana HOM05D001127 ORTHO05D002230 7.4e-06 54.3 37 64.9
Dinv08687 Davidia involucrata HOM05D001127 ORTHO05D015763 7.4e-06 54.3 37 64.9
Dinv35689 Davidia involucrata HOM05D001127 ORTHO05D002230 7.4e-06 54.3 37 64.9
Migut.F02011 Erythranthe guttata HOM05D001127 ORTHO05D002230 7.4e-06 54.3 46 58.7
Gohir.A01G218050 Gossypium hirsutum HOM05D001127 ORTHO05D002230 7.4e-06 54.3 65 47.7
Gohir.D01G206933 Gossypium hirsutum HOM05D001127 ORTHO05D002230 7.4e-06 54.3 65 47.7
Gorai.002G251900 Gossypium raimondii HOM05D001127 ORTHO05D002230 7.4e-06 54.3 65 47.7
Lalb_Chr06g0164381 Lupinus albus HOM05D001127 ORTHO05D002230 7.4e-06 54.3 27 88.9
Oeu017249.1 Olea europaea HOM05D001127 ORTHO05D002230 7.4e-06 54.3 72 48.6
SalBow4G2749 Salvia bowleyana HOM05D001127 ORTHO05D002230 7.4e-06 54.3 34 70.6
Hund22440 Selenicereus undatus HOM05D001127 ORTHO05D002230 7.4e-06 54.3 37 64.9
vmacro07100 Vaccinium macrocarpon HOM05D001127 ORTHO05D002230 7.4e-06 54.3 42 59.5
AL4G33670 Arabidopsis lyrata HOM05D001127 ORTHO05D002230 9.7e-06 53.9 63 49.2
AT2G37290 Arabidopsis thaliana HOM05D001127 ORTHO05D002230 9.7e-06 53.9 63 49.2
CARHR132300 Cardamine hirsuta HOM05D001127 ORTHO05D002230 9.7e-06 53.9 63 49.2
Ca_11384_v3 Cicer arietinum L. HOM05D001127 ORTHO05D002230 9.7e-06 53.9 31 77.4
ClCG02G013750 Citrullus lanatus HOM05D001127 ORTHO05D002230 9.7e-06 53.9 33 72.7
DCAR_015257 Daucus carota HOM05D001127 ORTHO05D002230 9.7e-06 53.9 60 51.7
Dinv11997 Davidia involucrata HOM05D001127 ORTHO05D015763 9.7e-06 53.9 98 34.7
ECA238G3032 Erigeron canadensis HOM05D001127 ORTHO05D002230 9.7e-06 53.9 41 61.0
Lsat_1_v5_gn_2_115380 Lactuca sativa HOM05D001127 ORTHO05D002230 9.7e-06 53.9 42 59.5
Nitab4.5_0000575g0050 Nicotiana tabacum HOM05D001127 ORTHO05D002230 9.7e-06 53.9 44 59.1
PSO384G1853 Papaver somniferum HOM05D001127 ORTHO05D002230 9.7e-06 53.9 30 80.0
PSO713G0001 Papaver somniferum HOM05D001127 ORTHO05D002230 9.7e-06 53.9 30 80.0
Potri.008G046600 Populus trichocarpa HOM05D001127 ORTHO05D002230 9.7e-06 53.9 37 64.9


User provided reference genes

Program Settings