Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.7e-51 205.7 100 100.0
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 8.6e-40 166.8 94 84.0
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 1.1e-39 166.4 94 80.9
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 1.9e-39 165.6 94 84.0
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 2.5e-39 165.2 94 84.0
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 3.3e-39 164.9 94 80.9
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 5.6e-39 164.1 94 79.8
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 9.5e-39 163.3 96 79.2
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 2.8e-38 161.8 94 80.9
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 3.6e-38 161.4 96 79.2
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.6e-38 161.4 96 80.2
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.6e-38 161.4 96 80.2
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.6e-38 161.4 96 80.2
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 8.1e-38 160.2 96 78.1
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.1e-37 159.8 95 78.9
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.1e-37 159.8 95 78.9
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.1e-37 159.8 95 78.9
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.1e-37 159.8 95 78.9
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.1e-37 159.8 94 78.7
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.1e-37 159.8 96 80.2
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.4e-37 159.5 95 77.9
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.4e-37 159.5 95 77.9
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 3.1e-37 158.3 96 79.2
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 3.1e-37 158.3 96 79.2
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 3.1e-37 158.3 96 79.2
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 3.1e-37 158.3 94 79.8
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 4.0e-37 157.9 94 79.8
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 4.0e-37 157.9 95 77.9
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 4.0e-37 157.9 94 78.7
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 5.2e-37 157.5 95 77.9
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 5.2e-37 157.5 96 79.2
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 5.2e-37 157.5 96 79.2
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 5.2e-37 157.5 95 81.1
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 5.2e-37 157.5 95 76.8
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 5.2e-37 157.5 94 79.8
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 6.8e-37 157.1 93 79.6
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 6.8e-37 157.1 95 76.8
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 8.9e-37 156.8 94 78.7
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 8.9e-37 156.8 94 78.7
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.2e-36 156.4 95 76.8
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.2e-36 156.4 95 76.8
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 1.5e-36 156.0 95 75.8
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.5e-36 156.0 96 75.0
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.5e-36 156.0 95 80.0
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 2.0e-36 155.6 95 75.8
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 2.0e-36 155.6 95 76.8
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 2.6e-36 155.2 95 75.8
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 2.6e-36 155.2 95 78.9
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 3.4e-36 154.8 96 74.0
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 4.4e-36 154.5 95 76.8
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 4.4e-36 154.5 95 75.8
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 5.8e-36 154.1 95 77.9
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 5.8e-36 154.1 96 75.0
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 7.6e-36 153.7 93 78.5
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 7.6e-36 153.7 94 77.7
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 7.6e-36 153.7 94 73.4
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 7.6e-36 153.7 95 74.7
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.7e-35 152.5 94 72.3
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 2.2e-35 152.1 95 73.7
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 2.2e-35 152.1 97 72.2
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 2.9e-35 151.8 96 75.0
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 3.8e-35 151.4 94 75.5
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 3.8e-35 151.4 96 71.9
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 4.9e-35 151.0 95 76.8
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.9e-35 151.0 96 72.9
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 4.9e-35 151.0 97 72.2
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 6.4e-35 150.6 94 74.5
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 8.4e-35 150.2 96 69.8
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 8.4e-35 150.2 97 72.2
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.4e-34 149.4 94 73.4
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.9e-34 149.1 93 76.3
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 1.9e-34 149.1 94 73.4
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.9e-34 149.1 95 72.6
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.4e-34 148.7 94 75.5
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.4e-34 148.7 94 75.5
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.4e-34 148.7 96 69.8
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 2.4e-34 148.7 95 73.7
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 3.2e-34 148.3 94 71.3
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 4.2e-34 147.9 95 75.8
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 5.4e-34 147.5 95 72.6
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 3.5e-33 144.8 95 70.5
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 4.6e-33 144.4 94 71.3
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 4.6e-33 144.4 95 73.7
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 7.8e-33 143.7 95 68.4
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 1.0e-32 143.3 94 70.2
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 1.7e-32 142.5 95 72.6
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 3.0e-32 141.7 94 70.2
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 5.1e-32 141.0 96 71.9
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 6.6e-32 140.6 97 72.2
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 8.7e-32 140.2 94 69.1
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.1e-31 139.8 95 68.4
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.9e-31 139.0 98 67.3
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 2.5e-31 138.7 94 69.1
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 7.3e-31 137.1 87 73.6
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 7.3e-31 137.1 95 70.5
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.6e-30 136.0 97 67.0
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 2.1e-30 135.6 93 67.7
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 6.9e-29 130.6 94 69.1
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 4.4e-28 127.9 94 68.1
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.9e-26 122.5 93 66.7
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 6.0e-25 117.5 97 56.7
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 7.8e-25 117.1 74 75.7
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 2.3e-24 115.5 87 70.1
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 2.3e-24 115.5 95 63.2
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 3.0e-24 115.2 96 54.2
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.1e-23 113.2 90 64.4
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 2.5e-23 112.1 86 66.3
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 4.9e-19 97.8 66 69.7
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 4.9e-19 97.8 58 79.3
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 2.1e-17 92.4 71 64.8
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.6e-17 91.3 72 68.1
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.9e-15 85.9 63 65.1
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 4.3e-15 84.7 55 70.9
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 4.8e-14 81.3 43 86.0
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 1.2e-12 76.6 40 87.5
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.7e-11 72.8 97 41.2
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 2.2e-11 72.4 42 73.8
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 1.0e-08 63.5 37 78.4
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 3.9e-08 61.6 96 36.5
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.5e-07 59.7 55 50.9
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 5.7e-07 57.8 47 53.2
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.6e-06 56.2 30 86.7
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 6.2e-06 54.3 60 46.7
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 8.2e-06 53.9 68 39.7


User provided reference genes

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