Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.4e-69 265.4 133 100.0
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 3.0e-32 142.1 89 82.0
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.4e-21 106.7 167 34.7
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.8e-21 106.3 173 34.1
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 4.1e-21 105.1 173 34.1
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 5.4e-21 104.8 172 34.3
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.6e-20 103.2 146 37.0
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 3.5e-20 102.1 164 32.9
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 7.7e-20 100.9 133 39.8
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 7.7e-20 100.9 168 35.1
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 3.8e-19 98.6 176 30.1
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 8.6e-19 97.4 178 32.6
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 4.2e-18 95.1 168 31.5
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 9.5e-18 94.0 130 37.7
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 2.8e-17 92.4 170 32.9
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 4.7e-17 91.7 170 31.8
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 8.0e-17 90.9 128 36.7
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.8e-16 89.7 171 32.7
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 3.0e-16 89.0 167 33.5
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 4.0e-16 88.6 131 34.4
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 5.2e-16 88.2 175 32.6
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 5.2e-16 88.2 167 34.1
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 6.8e-16 87.8 132 34.1
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 6.8e-16 87.8 169 30.8
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.5e-15 86.7 175 32.0
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.5e-15 86.7 160 31.2
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 3.4e-15 85.5 48 64.6
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 4.4e-15 85.1 127 35.4
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 4.4e-15 85.1 171 30.4
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 5.7e-15 84.7 170 35.3
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 5.7e-15 84.7 169 30.8
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 7.5e-15 84.3 121 36.4
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 1.3e-14 83.6 171 33.3
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.3e-14 83.6 134 35.1
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.7e-14 83.2 86 46.5
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.8e-14 82.4 176 29.0
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 2.8e-14 82.4 129 33.3
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.8e-14 82.4 171 31.6
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 3.7e-14 82.0 172 31.4
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 6.3e-14 81.3 171 32.2
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 8.3e-14 80.9 163 32.5
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 8.3e-14 80.9 173 32.4
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.1e-13 80.5 171 28.7
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.1e-13 80.5 168 32.1
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 1.1e-13 80.5 166 27.7
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 1.1e-13 80.5 88 44.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.8e-13 79.7 175 30.9
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.8e-13 79.7 130 33.8
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.8e-13 79.7 88 44.3
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 3.2e-13 79.0 127 34.6
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 3.2e-13 79.0 48 68.8
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 5.4e-13 78.2 97 39.2
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 5.4e-13 78.2 88 43.2
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 5.4e-13 78.2 130 33.1
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 7.0e-13 77.8 176 29.0
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 7.0e-13 77.8 166 26.5
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 7.0e-13 77.8 165 31.5
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 9.2e-13 77.4 153 31.4
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.2e-12 77.0 93 45.2
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.2e-12 77.0 93 45.2
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.2e-12 77.0 176 29.0
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.2e-12 77.0 171 26.3
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 1.2e-12 77.0 48 64.6
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 1.6e-12 76.6 47 57.4
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 1.6e-12 76.6 127 31.5
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 2.0e-12 76.3 121 33.1
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 2.0e-12 76.3 120 33.3
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 2.7e-12 75.9 126 34.1
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.5e-12 75.5 132 32.6
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 3.5e-12 75.5 48 58.3
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 5.9e-12 74.7 128 31.2
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 5.9e-12 74.7 88 37.5
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 5.9e-12 74.7 47 61.7
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.0e-11 73.9 91 38.5
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.0e-11 73.9 93 43.0
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.0e-11 73.9 117 35.9
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.3e-11 73.6 170 28.2
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.7e-11 73.2 48 60.4
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.7e-11 73.2 48 60.4
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.7e-11 73.2 48 60.4
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 2.3e-11 72.8 163 27.6
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 2.3e-11 72.8 50 56.0
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 3.9e-11 72.0 128 30.5
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 5.0e-11 71.6 158 32.9
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 6.6e-11 71.2 126 28.6
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 8.6e-11 70.9 47 63.8
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 8.6e-11 70.9 47 63.8
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 1.5e-10 70.1 182 25.8
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 1.9e-10 69.7 89 39.3
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 4.3e-10 68.6 127 26.8
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 5.6e-10 68.2 167 31.1
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 9.5e-10 67.4 127 30.7
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 4.4e-07 58.5 128 28.1
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 4.4e-07 58.5 143 31.5
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 4.4e-07 58.5 115 30.4
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.2e-06 56.2 126 28.6


User provided reference genes

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