Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1036G45 Lonicera japonica HOM05D001538 ORTHO05D000007 2.5e-262 908.3 468 100.0
Lju2566C0T15 Lonicera japonica HOM05D012945 ORTHO05D000007 3.6e-189 665.2 473 77.6
Lj2C23T9 Lonicera japonica HOM05D001538 ORTHO05D011045 4.2e-169 598.6 341 91.8
Lju41C39G13 Lonicera japonica HOM05D001538 ORTHO05D011045 4.1e-140 502.3 280 92.9
Lj1C330G10 Lonicera japonica HOM05D001538 ORTHO05D000007 2.5e-137 493.0 279 92.1
Lj7C620T12 Lonicera japonica HOM05D001538 ORTHO05D011045 5.0e-114 415.6 354 70.1
Lj2A887T25 Lonicera japonica HOM05D001538 ORTHO05D000007 8.0e-112 408.3 424 59.7
Lju760A7G21 Lonicera japonica HOM05D001538 ORTHO05D011045 1.2e-99 367.9 205 92.2
Lj6C526G1 Lonicera japonica HOM05D001538 ORTHO05D011045 2.0e-99 367.1 206 90.8
Lj4C412G6 Lonicera japonica HOM05D001538 ORTHO05D011045 5.4e-76 289.3 157 92.4
Lj7C754G12 Lonicera japonica HOM05D001538 ORTHO05D004667 3.6e-72 276.6 157 88.5
Lj4A815T24 Lonicera japonica HOM05D012945 ORTHO05D000007 4.7e-72 276.2 192 79.7
Lj7C754G16 Lonicera japonica HOM05D001538 ORTHO05D234672 2.0e-54 217.6 132 88.6
Lj3C187G11 Lonicera japonica HOM05D001538 ORTHO05D004667 3.0e-50 203.8 128 84.4
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-48 198.4 109 91.7
Lj2C23T8 Lonicera japonica HOM05D012945 ORTHO05D000007 3.6e-48 196.8 108 92.6
Lj9P687T30 Lonicera japonica HOM05D012945 ORTHO05D000007 6.4e-45 186.0 107 91.6
Lj7C297T8 Lonicera japonica HOM05D001538 ORTHO05D004667 1.4e-44 184.9 282 46.1
Lju124C43G10 Lonicera japonica HOM05D012945 ORTHO05D235460 9.3e-36 155.6 100 87.0
Lju760C7G6 Lonicera japonica HOM05D012945 ORTHO05D000007 6.0e-35 152.9 86 91.9
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-31 142.1 497 31.4
Lj1C10G6 Lonicera japonica HOM05D001538 ORTHO05D004667 1.8e-31 141.4 472 32.8
Lj7A729G39 Lonicera japonica HOM05D010180 ORTHO05D002396 7.6e-30 136.0 323 36.2
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-29 135.2 463 32.2
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 2.9e-29 134.0 550 27.5
Lj3P241T16 Lonicera japonica HOM05D010180 ORTHO05D011045 1.1e-28 132.1 321 35.2
Lj5C834G10 Lonicera japonica HOM05D001538 ORTHO05D000007 1.9e-28 131.3 432 31.0
Lj6C228T14 Lonicera japonica HOM05D010180 ORTHO05D011045 4.6e-27 126.7 126 54.0
Lj1A545G61 Lonicera japonica HOM05D000764 ORTHO05D011045 1.0e-26 125.6 275 36.4
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 8.7e-26 122.5 516 27.5
Lj8A740G21 Lonicera japonica HOM05D001538 ORTHO05D000007 8.7e-26 122.5 232 38.8
Lj9C653T10 Lonicera japonica HOM05D001538 ORTHO05D004667 1.3e-24 118.6 320 31.9
Lj9P658T31 Lonicera japonica HOM05D001538 ORTHO05D011045 1.3e-24 118.6 247 36.4
Lj9P81T10 Lonicera japonica HOM05D001538 ORTHO05D011045 4.8e-24 116.7 276 34.4
Lj3P693T50 Lonicera japonica HOM05D001538 ORTHO05D011045 1.2e-22 112.1 181 40.3
Lj1A1068G46 Lonicera japonica HOM05D001538 ORTHO05D011045 3.4e-22 110.5 201 40.3
Lj5A648T14 Lonicera japonica HOM05D010180 ORTHO05D000007 3.4e-22 110.5 262 38.2
Lj7A15G46 Lonicera japonica HOM05D000062 ORTHO05D011045 3.4e-22 110.5 125 55.2
Lju225C4G7 Lonicera japonica HOM05D001538 ORTHO05D011045 5.9e-22 109.8 341 34.0
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 1.7e-21 108.2 377 30.0
Lj6A56G21 Lonicera japonica HOM05D001538 ORTHO05D000007 2.2e-21 107.8 321 32.4
Lju2566C0G3 Lonicera japonica HOM05D001538 ORTHO05D011045 3.8e-21 107.1 307 31.6
Lj5C610T14 Lonicera japonica HOM05D001538 ORTHO05D007090 5.0e-21 106.7 266 34.2
Lju1220C2G3 Lonicera japonica HOM05D001538 ORTHO05D011045 8.5e-21 105.9 209 38.8
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 3.2e-20 104.0 116 48.3
Lj9A98T13 Lonicera japonica HOM05D010180 ORTHO05D000007 4.2e-20 103.6 121 51.2
Lj9C91T6 Lonicera japonica HOM05D001538 ORTHO05D011045 5.5e-20 103.2 152 44.7
Lj3P1001T27 Lonicera japonica HOM05D001538 ORTHO05D011045 1.6e-19 101.7 203 34.0
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 4.6e-19 100.1 512 26.8
Lju963C5T12 Lonicera japonica HOM05D010180 ORTHO05D011045 1.0e-18 99.0 89 58.4
Lj2C1218T15 Lonicera japonica HOM05D001538 ORTHO05D000007 5.1e-18 96.7 103 52.4
Lju50C41T1 Lonicera japonica HOM05D001538 ORTHO05D234057 1.1e-17 95.5 305 30.8
Lj4C390T3 Lonicera japonica HOM05D010180 ORTHO05D011045 1.5e-17 95.1 213 35.7
Lj3P275T12 Lonicera japonica HOM05D001538 ORTHO05D011045 4.3e-17 93.6 237 31.6
Lj8A171T44 Lonicera japonica HOM05D010180 ORTHO05D011045 4.3e-17 93.6 173 37.6
Lju521C0T3 Lonicera japonica HOM05D001538 ORTHO05D011045 7.4e-17 92.8 175 36.6
Lj2A1218G28 Lonicera japonica HOM05D012945 ORTHO05D000007 1.3e-16 92.0 87 52.9
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-16 92.0 91 49.5
Lj8C478T4 Lonicera japonica HOM05D001538 ORTHO05D000007 4.8e-16 90.1 128 47.7
Lj9A692G58 Lonicera japonica HOM05D001538 ORTHO05D000007 8.2e-16 89.4 91 47.3
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-15 89.0 499 25.5
Lj2C1219T20 Lonicera japonica HOM05D001538 ORTHO05D234715 1.4e-15 88.6 414 28.0
Lj2C1218G1 Lonicera japonica HOM05D001538 ORTHO05D235847 3.1e-15 87.4 214 34.1
Lj9C692T4 Lonicera japonica HOM05D001538 ORTHO05D000007 4.1e-15 87.0 90 46.7
Lj3C82G2 Lonicera japonica HOM05D001538 ORTHO05D011045 5.3e-15 86.7 145 35.9
Lj1P829T29 Lonicera japonica HOM05D001538 ORTHO05D235877 6.9e-15 86.3 162 36.4
Lj8P453T33 Lonicera japonica HOM05D001538 ORTHO05D235431 6.9e-15 86.3 342 28.9
Lj1A330G24 Lonicera japonica HOM05D004114 ORTHO05D004667 9.1e-15 85.9 48 91.7
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 2.0e-14 84.7 124 41.9
Lju2422A0T21 Lonicera japonica HOM05D001538 ORTHO05D000007 4.5e-14 83.6 436 27.1
Lj2C15G8 Lonicera japonica HOM05D001538 ORTHO05D234020 7.7e-14 82.8 70 52.9
Lj2P897T19 Lonicera japonica HOM05D010180 ORTHO05D011045 1.0e-13 82.4 196 35.2
Lj2C1218T8 Lonicera japonica HOM05D001538 ORTHO05D011045 2.9e-13 80.9 154 39.6
Lj7C143G3 Lonicera japonica HOM05D001538 ORTHO05D011045 2.9e-13 80.9 134 38.8
Lj6P255T28 Lonicera japonica HOM05D001538 ORTHO05D234218 1.4e-12 78.6 129 34.1
Lj6P265T37 Lonicera japonica HOM05D001538 ORTHO05D235040 1.4e-12 78.6 129 34.1
Lj7C583G3 Lonicera japonica HOM05D005757 ORTHO05D007090 1.9e-12 78.2 172 37.8
Lj3P30T33 Lonicera japonica HOM05D010180 ORTHO05D011045 4.2e-12 77.0 92 48.9
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 5.5e-12 76.6 111 43.2
Lj2A1219T41 Lonicera japonica HOM05D001538 ORTHO05D000007 7.2e-12 76.3 89 43.8
Lju2566A0G20 Lonicera japonica HOM05D001538 ORTHO05D004667 1.6e-11 75.1 81 49.4
Lj2C488T1 Lonicera japonica HOM05D001538 ORTHO05D000007 3.6e-11 73.9 56 64.3
Lj4C847T12 Lonicera japonica HOM05D001538 ORTHO05D007090 7.9e-11 72.8 411 26.3
Lju515C2T6 Lonicera japonica HOM05D010180 ORTHO05D011045 7.9e-11 72.8 71 54.9
Lj8P479T52 Lonicera japonica HOM05D001538 ORTHO05D234728 1.0e-10 72.4 136 33.1
Lju521A0G34 Lonicera japonica HOM05D001538 ORTHO05D233929 1.8e-10 71.6 166 32.5
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 1.1e-09 68.9 120 39.2
Lju521P0T33 Lonicera japonica HOM05D012945 ORTHO05D000007 4.4e-09 67.0 96 42.7
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 4.4e-09 67.0 135 33.3
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 4.4e-09 67.0 95 38.9
Lj3P57T17 Lonicera japonica HOM05D010180 ORTHO05D011045 7.4e-09 66.2 83 47.0
Lj9A92G12 Lonicera japonica HOM05D001538 ORTHO05D036482 9.7e-09 65.9 92 45.7
Lju41C55T6 Lonicera japonica HOM05D001538 ORTHO05D235798 1.7e-08 65.1 153 34.6
Lj1C11T4 Lonicera japonica HOM05D010180 ORTHO05D011045 2.2e-08 64.7 180 32.8
Lju41C24T0 Lonicera japonica HOM05D001538 ORTHO05D234144 2.2e-08 64.7 145 37.2
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 2.2e-08 64.7 104 37.5
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 2.8e-08 64.3 92 40.2
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 2.4e-07 61.2 104 37.5
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.4e-07 61.2 91 38.5
Lj1A1222T74 Lonicera japonica HOM05D001538 ORTHO05D234008 3.1e-07 60.8 128 34.4
Lj1P271T5 Lonicera japonica HOM05D012945 ORTHO05D000007 3.1e-07 60.8 81 40.7
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 4.1e-07 60.5 105 34.3
Lj2C1217T9 Lonicera japonica HOM05D010180 ORTHO05D011045 5.3e-07 60.1 133 34.6
Lj7A234T36 Lonicera japonica HOM05D001538 ORTHO05D234496 5.3e-07 60.1 104 37.5
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 5.3e-07 60.1 97 42.3
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 7.0e-07 59.7 112 36.6
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 9.1e-07 59.3 92 40.2
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-06 58.2 130 29.2
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-06 58.2 130 29.2
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-06 58.2 117 31.6
Lj4C9G2 Lonicera japonica HOM05D010180 ORTHO05D011045 2.6e-06 57.8 88 40.9
Lju1040C2T6 Lonicera japonica HOM05D010180 ORTHO05D235247 2.6e-06 57.8 248 28.2
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 3.5e-06 57.4 114 33.3
Lj4C391G5 Lonicera japonica HOM05D002350 ORTHO05D000091 4.5e-06 57.0 69 44.9
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 5.9e-06 56.6 111 33.3
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 5.9e-06 56.6 124 27.4


User provided reference genes

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