Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.8e-87 325.9 166 100.0
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.5e-60 236.5 159 70.4
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 7.3e-60 234.2 162 72.2
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 7.3e-60 234.2 140 85.0
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.1e-59 232.6 162 72.8
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 2.8e-59 232.3 163 71.2
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.9e-56 222.2 160 71.9
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 6.4e-56 221.1 161 68.3
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.4e-55 219.9 165 70.9
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.9e-55 219.5 165 63.6
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 4.2e-55 218.4 165 70.3
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.6e-54 216.5 154 70.1
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 6.0e-54 214.5 163 65.0
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 1.7e-53 213.0 163 65.6
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 2.3e-53 212.6 158 68.4
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 3.0e-53 212.2 165 68.5
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 3.9e-53 211.8 159 69.2
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 1.1e-52 210.3 161 65.2
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.1e-52 210.3 157 65.6
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 1.1e-52 210.3 159 68.6
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 1.1e-52 210.3 159 68.6
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 1.5e-52 209.9 163 64.4
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 3.3e-52 208.8 160 63.8
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 3.3e-52 208.8 159 64.8
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 5.6e-52 208.0 162 61.7
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 7.3e-52 207.6 153 64.1
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 9.6e-52 207.2 159 62.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 1.3e-51 206.8 162 60.5
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 2.8e-51 205.7 162 59.3
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 4.8e-51 204.9 163 65.6
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 4.8e-51 204.9 163 62.6
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 6.2e-51 204.5 144 68.8
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 2.4e-50 202.6 164 63.4
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 3.1e-50 202.2 165 59.4
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 3.1e-50 202.2 161 62.1
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 5.3e-50 201.4 163 60.7
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 6.9e-50 201.1 141 70.2
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 6.9e-50 201.1 162 61.1
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 6.9e-50 201.1 151 66.2
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 6.9e-50 201.1 155 61.3
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 6.9e-50 201.1 161 60.9
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 9.0e-50 200.7 146 65.8
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 9.0e-50 200.7 143 67.8
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 4.4e-49 198.4 160 60.0
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 9.9e-49 197.2 143 67.8
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 2.2e-48 196.1 147 62.6
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.2e-48 196.1 143 66.4
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 2.2e-48 196.1 155 63.2
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 2.9e-48 195.7 162 61.1
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 3.8e-48 195.3 163 57.7
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 4.9e-48 194.9 161 57.8
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 1.9e-47 193.0 165 56.4
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 5.4e-47 191.4 146 62.3
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.6e-46 189.9 157 60.5
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 2.1e-46 189.5 140 65.0
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 2.1e-46 189.5 137 68.6
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 2.7e-46 189.1 154 60.4
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.0e-45 187.2 146 62.3
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.7e-45 186.4 155 58.7
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.7e-45 186.4 152 57.9
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 3.0e-45 185.7 157 59.2
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 3.0e-45 185.7 165 55.8
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 3.9e-45 185.3 146 58.9
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 8.7e-45 184.1 165 56.4
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 8.7e-45 184.1 154 60.4
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 1.1e-44 183.7 156 59.6
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 1.1e-44 183.7 164 54.9
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 1.5e-44 183.3 140 64.3
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 1.5e-44 183.3 159 57.2
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 2.5e-44 182.6 140 64.3
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 3.3e-44 182.2 157 58.6
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 4.3e-44 181.8 140 63.6
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 4.3e-44 181.8 143 59.4
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 5.6e-44 181.4 156 58.3
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 9.6e-44 180.6 146 58.9
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.3e-43 180.3 163 58.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 2.1e-43 179.5 144 61.8
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.1e-43 179.5 147 57.8
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 2.1e-43 179.5 156 59.0
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 2.8e-43 179.1 137 62.8
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 3.6e-43 178.7 163 57.7
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 3.6e-43 178.7 150 55.3
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 4.8e-43 178.3 157 58.0
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 4.8e-43 178.3 164 54.3
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 4.8e-43 178.3 140 62.1
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 6.2e-43 177.9 140 62.9
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 6.2e-43 177.9 140 62.9
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 8.1e-43 177.6 116 72.4
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.4e-42 176.8 140 62.1
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.4e-42 176.8 163 52.1
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.4e-42 176.0 156 57.1
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 3.1e-42 175.6 146 58.9
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 5.3e-42 174.9 155 56.1
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 6.9e-42 174.5 154 55.2
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 9.0e-42 174.1 140 58.6
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.6e-41 172.6 161 50.9
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 3.4e-41 172.2 178 53.9
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 2.9e-40 169.1 146 54.8
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 8.4e-40 167.5 174 52.3
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 1.1e-39 167.2 134 60.4
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.9e-39 166.4 156 53.8
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 1.6e-38 163.3 127 64.6
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 2.7e-38 162.5 135 57.0
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 5.6e-36 154.8 157 50.3
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 9.6e-36 154.1 135 55.6
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.3e-35 153.7 114 63.2
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.2e-35 151.4 115 61.7
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 1.1e-34 150.6 155 50.3
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 4.5e-33 145.2 144 55.6
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.3e-32 143.7 164 45.1
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 2.2e-32 142.9 128 58.6
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.4e-31 140.2 158 48.7
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 3.9e-29 132.1 140 43.6
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 4.0e-26 122.1 131 43.5
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 6.9e-26 121.3 132 47.0
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 8.4e-24 114.4 76 68.4
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 2.5e-23 112.8 132 44.7
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 1.8e-21 106.7 107 49.5
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.1e-18 97.4 120 43.3
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 4.1e-18 95.5 149 38.3
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 9.0e-18 94.4 90 54.4
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 5.9e-17 91.7 130 40.0
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 1.7e-16 90.1 89 51.7
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.2e-16 89.7 63 68.3
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 5.0e-16 88.6 144 34.0
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 6.5e-16 88.2 68 63.2
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.8e-13 80.1 70 54.3
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 6.7e-13 78.2 89 47.2
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.4e-10 70.5 56 60.7
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 4.1e-10 68.9 87 41.4
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 2.9e-08 62.8 41 58.5


User provided reference genes

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