Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1010G26 Lonicera japonica HOM05D001934 ORTHO05D002139 2.0e-52 208.8 102 100.0
FAN16G0005 Fragaria x ananassa HOM05D001934 ORTHO05D002139 2.3e-08 62.4 75 50.7
Manes.11G152000 Manihot esculenta HOM05D001934 ORTHO05D002139 2.3e-08 62.4 51 56.9
QL01p015243 Quercus lobata HOM05D001934 ORTHO05D002139 2.3e-08 62.4 53 60.4
Oeu040438.1 Olea europaea HOM05D001934 ORTHO05D002139 4.0e-08 61.6 56 57.1
CARHR225720 Cardamine hirsuta HOM05D001934 ORTHO05D002139 5.2e-08 61.2 64 46.9
Cc02_g28260 Coffea canephora HOM05D001934 ORTHO05D002139 8.9e-08 60.5 52 59.6
Sabra09G0003200 Salix brachista HOM05D001934 ORTHO05D002139 1.2e-07 60.1 48 56.2
ClCG02G021550 Citrullus lanatus HOM05D001934 ORTHO05D002139 1.5e-07 59.7 48 60.4
MELO3C026949.2 Cucumis melo HOM05D001934 ORTHO05D002139 1.5e-07 59.7 48 60.4
CsaV3_6G014300 Cucumis sativus L. HOM05D001934 ORTHO05D002139 1.5e-07 59.7 48 60.4
Lj2A1009G37 Lonicera japonica HOM05D001934 ORTHO05D002139 1.5e-07 59.7 47 66.0
Cc01_g10340 Coffea canephora HOM05D001934 ORTHO05D002139 2.0e-07 59.3 48 62.5
Eucgr.J00386 Eucalyptus grandis HOM05D001934 ORTHO05D002139 2.6e-07 58.9 48 64.6
Psat7g191720 Pisum sativum HOM05D001934 ORTHO05D002139 2.6e-07 58.9 47 63.8
TWI75G1147 Tripterygium wilfordii HOM05D001934 ORTHO05D002139 2.6e-07 58.9 51 54.9
Haze_23710 Corylus avellana HOM05D001934 ORTHO05D002139 3.4e-07 58.5 48 60.4
Migut.D00893 Erythranthe guttata HOM05D001934 ORTHO05D002139 3.4e-07 58.5 75 46.7
HanXRQChr01g0019601 Helianthus annuus HOM05D001934 ORTHO05D002139 3.4e-07 58.5 48 60.4
Cfa010294 Carpinus fangiana HOM05D001934 ORTHO05D002139 4.4e-07 58.2 48 60.4
PGR119G0273 Punica granatum HOM05D001934 ORTHO05D002139 4.4e-07 58.2 48 62.5
Cpa.g.sc1.8 Carica papaya HOM05D001934 ORTHO05D002139 5.8e-07 57.8 48 56.2
Ca_19318_v3 Cicer arietinum L. HOM05D001934 ORTHO05D002139 5.8e-07 57.8 47 63.8
Dinv29375 Davidia involucrata HOM05D001934 ORTHO05D002139 5.8e-07 57.8 51 56.9
Medtr4g057345 Medicago truncatula HOM05D001934 ORTHO05D002139 5.8e-07 57.8 47 63.8
Oeu007739.1 Olea europaea HOM05D001934 ORTHO05D002139 5.8e-07 57.8 48 60.4
Phvul.011G085900 Phaseolus vulgaris HOM05D001934 ORTHO05D002139 7.5e-07 57.4 47 61.7
SHI06224 Sapria himalayana HOM05D001934 ORTHO05D002139 7.5e-07 57.4 51 54.9
TPR.G36794 Trifolium pratense HOM05D001934 ORTHO05D002139 7.5e-07 57.4 46 65.2
BcaC05g24731 Brassica carinata HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 56.2
BcaC07g41965 Brassica carinata HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 56.2
C08p50170 Brassica napus HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 56.2
BolC5t29379H Brassica oleracea HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 56.2
BolC8t52546H Brassica oleracea HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 56.2
BraA06t23726Z Brassica rapa HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 56.2
BraA09t41940Z Brassica rapa HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 56.2
ECA248G1944 Erigeron canadensis HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 62.5
HanXRQChr11g0345941 Helianthus annuus HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 60.4
Lj3g0025418 Lotus japonicus HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 60.4
Potri.009G005900 Populus trichocarpa HOM05D001934 ORTHO05D002139 9.8e-07 57.0 48 54.2
VMungo1127G0172 Vigna mungo HOM05D001934 ORTHO05D002139 9.8e-07 57.0 47 59.6
A06p05190 Brassica napus HOM05D001934 ORTHO05D002139 1.3e-06 56.6 48 56.2
A09p66010 Brassica napus HOM05D001934 ORTHO05D002139 1.3e-06 56.6 48 56.2
CiPaw.13G123200 Carya illinoinensis HOM05D001934 ORTHO05D002139 1.3e-06 56.6 48 58.3
DCAR_018768 Daucus carota HOM05D001934 ORTHO05D002139 1.3e-06 56.6 48 60.4
Thhalv10006843m.g Eutrema salsugineum HOM05D001934 ORTHO05D002139 1.3e-06 56.6 48 56.2
Hma1.2p1_0779F.1_g216700 Hydrangea macrophylla HOM05D001934 ORTHO05D002139 1.3e-06 56.6 47 57.4
Sp1g06770 Schrenkiella parvula HOM05D001934 ORTHO05D002139 1.3e-06 56.6 48 56.2
GSVIVG01031470001 Vitis vinifera HOM05D001934 ORTHO05D002139 1.3e-06 56.6 53 54.7
CANSAT54G0170 Cannabis sativa HOM05D001934 ORTHO05D002139 1.7e-06 56.2 48 58.3
Carub.0001s0748 Capsella rubella HOM05D001934 ORTHO05D002139 1.7e-06 56.2 48 56.2
COL.COLO4_11104 Corchorus olitorius HOM05D001934 ORTHO05D002139 1.7e-06 56.2 47 61.7
Lsat_1_v5_gn_1_64561 Lactuca sativa HOM05D001934 ORTHO05D002139 1.7e-06 56.2 41 70.7
vmacro03256 Vaccinium macrocarpon HOM05D001934 ORTHO05D002139 1.7e-06 56.2 53 52.8
C05p06240 Brassica napus HOM05D001934 ORTHO05D002139 2.2e-06 55.8 48 54.2
CARHR007940 Cardamine hirsuta HOM05D001934 ORTHO05D002139 2.2e-06 55.8 47 57.4
SGA_v2.0_scaffold442G51676 Striga asiatica HOM05D001934 ORTHO05D002139 2.2e-06 55.8 48 58.3
unitig_22.g5652 Utricularia gibba HOM05D001934 ORTHO05D002139 2.2e-06 55.8 49 57.1
MSTRG.17761 Avicennia marina HOM05D001934 ORTHO05D002139 2.9e-06 55.5 48 56.2
Migut.N02546 Erythranthe guttata HOM05D001934 ORTHO05D002139 2.9e-06 55.5 48 58.3
Glyma.11G193100 Glycine max HOM05D001934 ORTHO05D002139 2.9e-06 55.5 47 57.4
Glyma.12G080900 Glycine max HOM05D001934 ORTHO05D002139 2.9e-06 55.5 47 59.6
Gohir.A03G029300 Gossypium hirsutum HOM05D001934 ORTHO05D002139 2.9e-06 55.5 47 57.4
Gohir.D03G139300 Gossypium hirsutum HOM05D001934 ORTHO05D002139 2.9e-06 55.5 47 57.4
Gorai.003G146000 Gossypium raimondii HOM05D001934 ORTHO05D002139 2.9e-06 55.5 47 57.4
Prupe.6G112300 Prunus persica HOM05D001934 ORTHO05D002139 2.9e-06 55.5 48 58.3
Thecc.09G350700 Theobroma cacao HOM05D001934 ORTHO05D002139 2.9e-06 55.5 47 57.4
MD03G1127000 Malus domestica HOM05D001934 ORTHO05D002139 3.7e-06 55.1 48 56.2
MD11G1147700 Malus domestica HOM05D001934 ORTHO05D002139 3.7e-06 55.1 42 66.7
AL1G18510 Arabidopsis lyrata HOM05D001934 ORTHO05D002139 4.9e-06 54.7 48 54.2
BcaB07g34055 Brassica carinata HOM05D001934 ORTHO05D002139 4.9e-06 54.7 48 54.2
CSS0030578 Camellia sinensis var. sinensis HOM05D001934 ORTHO05D002139 4.9e-06 54.7 53 50.9
CSS0042491 Camellia sinensis var. sinensis HOM05D001934 ORTHO05D002139 4.9e-06 54.7 53 50.9
Ciclev10027871m.g Citrus clementina HOM05D001934 ORTHO05D002139 4.9e-06 54.7 48 56.2
Atru.chr3.3525 Acer truncatum HOM05D001934 ORTHO05D002139 6.4e-06 54.3 48 54.2
Aa31sc759G20 Aethionema arabicum HOM05D001934 ORTHO05D002139 6.4e-06 54.3 48 52.1
AUR62014959 Chenopodium quinoa HOM05D001934 ORTHO05D002139 6.4e-06 54.3 48 52.1
AUR62029176 Chenopodium quinoa HOM05D001934 ORTHO05D002139 6.4e-06 54.3 48 52.1
Duzib150G0588 Durio zibethinus HOM05D001934 ORTHO05D002139 6.4e-06 54.3 47 55.3
Lalb_Chr19g0136941 Lupinus albus HOM05D001934 ORTHO05D002139 6.4e-06 54.3 48 58.3
Rhsim13G0100300 Rhododendron simsii HOM05D001934 ORTHO05D002139 6.4e-06 54.3 53 47.2
SMO134G0141 Selaginella moellendorffii HOM05D001934 ORTHO05D002139 6.4e-06 54.3 73 42.5
Peaxi162Scf01492g00010 Petunia axillaris HOM05D001934 ORTHO05D002139 8.3e-06 53.9 48 56.2
SEGI_21231 Sequoiadendron giganteum HOM05D001934 ORTHO05D002139 8.3e-06 53.9 53 47.2


User provided reference genes

Program Settings