Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 3.8e-103 378.3 200 100.0
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 9.7e-75 283.9 200 77.0
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 4.8e-74 281.6 200 74.0
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.8e-73 279.6 200 74.0
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 3.4e-72 275.4 199 75.4
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 7.7e-72 274.2 194 75.8
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.3e-71 273.5 200 74.5
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.3e-71 273.5 200 74.5
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.3e-71 273.5 200 76.0
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 2.9e-71 272.3 200 74.5
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 6.5e-71 271.2 200 74.5
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 8.5e-71 270.8 200 71.0
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 1.1e-70 270.4 200 74.5
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 1.1e-70 270.4 201 73.1
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.9e-70 269.6 200 73.0
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.9e-70 269.6 200 73.0
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.5e-70 269.2 200 73.0
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.5e-70 269.2 200 73.0
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 4.2e-70 268.5 193 75.6
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 5.5e-70 268.1 200 72.5
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 5.5e-70 268.1 201 72.1
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 9.4e-70 267.3 199 72.4
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 9.4e-70 267.3 193 75.1
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 1.2e-69 266.9 199 71.4
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 1.6e-69 266.5 202 71.8
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 1.6e-69 266.5 202 71.8
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 1.6e-69 266.5 202 71.8
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 1.6e-69 266.5 202 71.8
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.6e-69 266.5 200 72.0
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.6e-69 266.5 200 69.5
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 2.1e-69 266.2 199 70.4
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.1e-69 266.2 198 72.7
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.7e-69 265.8 200 72.0
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 3.6e-69 265.4 200 73.0
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 3.6e-69 265.4 200 73.0
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 3.6e-69 265.4 198 72.7
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 3.6e-69 265.4 199 72.4
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 4.7e-69 265.0 199 73.4
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 4.7e-69 265.0 200 73.0
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 6.1e-69 264.6 199 70.4
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 6.1e-69 264.6 200 72.0
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 7.9e-69 264.2 202 71.3
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 7.9e-69 264.2 202 71.3
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 1.4e-68 263.5 196 72.4
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 1.4e-68 263.5 193 74.6
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 1.4e-68 263.5 200 70.5
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.8e-68 263.1 201 71.1
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.3e-68 262.7 201 73.1
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 2.3e-68 262.7 199 69.8
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 2.3e-68 262.7 200 72.0
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 2.3e-68 262.7 200 72.0
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 5.2e-68 261.5 203 71.9
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 5.2e-68 261.5 200 67.5
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 6.7e-68 261.2 199 68.3
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 6.7e-68 261.2 196 70.4
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 8.8e-68 260.8 199 71.4
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 1.1e-67 260.4 200 71.5
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 1.1e-67 260.4 200 73.0
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 2.0e-67 259.6 200 72.0
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 2.0e-67 259.6 200 71.5
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.6e-67 259.2 200 71.5
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 3.3e-67 258.8 199 71.9
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 3.3e-67 258.8 200 71.0
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 5.7e-67 258.1 196 69.4
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 5.7e-67 258.1 200 71.5
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 7.4e-67 257.7 200 72.0
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 7.4e-67 257.7 200 69.0
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.7e-66 256.5 199 67.3
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.7e-66 256.5 171 76.0
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 2.2e-66 256.1 200 70.0
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 2.8e-66 255.8 216 67.1
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 3.7e-66 255.4 200 71.0
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 4.8e-66 255.0 199 67.3
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 4.8e-66 255.0 200 71.5
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 8.2e-66 254.2 200 71.0
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 8.2e-66 254.2 200 71.0
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.1e-65 253.8 200 71.5
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 1.1e-65 253.8 200 71.0
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.8e-65 253.1 200 69.5
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.8e-65 253.1 199 70.9
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 4.1e-65 251.9 196 70.4
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 5.3e-65 251.5 199 70.4
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 7.0e-65 251.1 198 69.7
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 2.0e-64 249.6 200 69.5
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 2.0e-64 249.6 161 78.3
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 3.5e-64 248.8 200 69.0
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 3.5e-64 248.8 199 69.3
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 4.5e-64 248.4 196 69.4
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 7.7e-64 247.7 200 68.5
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 2.2e-63 246.1 177 73.4
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 3.8e-63 245.4 200 69.0
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 8.5e-63 244.2 201 67.2
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 1.1e-62 243.8 153 82.4
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 1.5e-62 243.4 159 79.2
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.2e-61 240.4 199 65.3
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 3.0e-60 235.7 198 64.1
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 8.8e-60 234.2 174 70.7
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 1.8e-52 209.9 146 75.3
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 1.3e-47 193.7 184 53.8
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 1.9e-46 189.9 168 57.1
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 3.4e-43 179.1 143 68.5
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 1.2e-40 170.6 156 54.5
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.9e-40 168.3 176 50.0
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 1.0e-39 167.5 160 53.1
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.3e-39 167.2 197 47.2
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 5.0e-39 165.2 105 81.9
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 8.6e-39 164.5 177 49.2
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 8.6e-39 164.5 177 49.2
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-37 160.6 103 83.5
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.5e-35 153.7 94 85.1
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.0e-35 153.3 102 80.4
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 9.8e-35 151.0 103 79.6
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.5e-30 136.3 114 68.4
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 8.0e-29 131.3 90 78.9
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 7.0e-25 118.2 88 64.8
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 7.8e-24 114.8 153 39.9
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 3.9e-23 112.5 71 83.1
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 2.1e-21 106.7 165 36.4
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 2.1e-21 106.7 96 61.5
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 1.3e-18 97.4 96 60.4
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 2.4e-17 93.2 88 60.2
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 7.8e-16 88.2 170 31.2
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.2e-13 80.9 105 45.7
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 3.1e-12 76.3 156 32.7
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 1.2e-11 74.3 95 48.4
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 6.4e-10 68.6 44 70.5
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.4e-09 67.4 43 72.1
SMO334G0054 Selaginella moellendorffii HOM05D005275 ORTHO05D006435 9.6e-06 54.7 162 31.5


User provided reference genes

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