Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0028169 Lotus japonicus HOM05D000205 ORTHO05D236305 4.2e-30 134.0 67 100.0
Lj4g0001455 Lotus japonicus HOM05D000205 ORTHO05D000438 1.2e-08 62.8 36 88.9
Psat1g186400 Pisum sativum HOM05D000205 ORTHO05D000438 7.6e-08 60.1 36 80.6
Medtr4g118610 Medicago truncatula HOM05D000205 ORTHO05D000438 1.0e-07 59.7 36 83.3
TPR.G14953 Trifolium pratense HOM05D000205 ORTHO05D000438 1.0e-07 59.7 36 83.3
TPR.G18041 Trifolium pratense HOM05D000205 ORTHO05D000438 1.3e-07 59.3 36 80.6
Medtr2g020710 Medicago truncatula HOM05D000205 ORTHO05D000438 1.7e-07 58.9 36 77.8
Ca_13455_v3 Cicer arietinum L. HOM05D000205 ORTHO05D000438 2.2e-07 58.5 36 77.8
Ca_30646_v3 Cicer arietinum L. HOM05D000205 ORTHO05D000438 2.2e-07 58.5 36 77.8
arahy.Tifrunner.gnm1.ann1.5QB4T4 Arachis hypogaea HOM05D000205 ORTHO05D000438 4.9e-07 57.4 36 80.6
Ca_29808_v3 Cicer arietinum L. HOM05D000205 ORTHO05D000438 4.9e-07 57.4 36 80.6
Glyma.07G252766 Glycine max HOM05D000205 ORTHO05D000438 4.9e-07 57.4 36 80.6
arahy.Tifrunner.gnm1.ann1.BPP12U Arachis hypogaea HOM05D000205 ORTHO05D013496 6.5e-07 57.0 36 80.6
arahy.Tifrunner.gnm1.ann1.E884N9 Arachis hypogaea HOM05D000205 ORTHO05D000438 6.5e-07 57.0 36 80.6
arahy.Tifrunner.gnm1.ann1.W2KP9A Arachis hypogaea HOM05D000205 ORTHO05D000438 6.5e-07 57.0 36 80.6
Lalb_Chr13g0303961 Lupinus albus HOM05D000205 ORTHO05D000438 6.5e-07 57.0 36 75.0
Ca_21558_v3 Cicer arietinum L. HOM05D000205 ORTHO05D000438 8.4e-07 56.6 36 77.8
VMungo0540G2009 Vigna mungo HOM05D000205 ORTHO05D000438 8.4e-07 56.6 36 77.8
Glyma.17G021602 Glycine max HOM05D000205 ORTHO05D000438 1.9e-06 55.5 36 75.0
Lj6g0017171 Lotus japonicus HOM05D000205 ORTHO05D000438 1.9e-06 55.5 36 72.2
Glyma.13G213200 Glycine max HOM05D000205 ORTHO05D000438 2.5e-06 55.1 36 75.0
Glyma.13G213300 Glycine max HOM05D000205 ORTHO05D000438 4.2e-06 54.3 36 72.2
Glyma.15G099500 Glycine max HOM05D000205 ORTHO05D000438 4.2e-06 54.3 36 72.2
Cpa.g.sc447.2 Carica papaya HOM05D000205 ORTHO05D000438 7.1e-06 53.5 36 72.2


User provided reference genes

Program Settings