Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0027806 Lotus japonicus HOM05D007728 ORTHO05D009681 0.0e+00 1375.1 682 100.0
LjContig00357g0010761 Lotus japonicus HOM05D007728 ORTHO05D009681 3.6e-238 828.6 816 57.6
Lj1g0027147 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-235 818.5 816 57.5
Lj6g0001515 Lotus japonicus HOM05D007728 ORTHO05D009681 3.1e-205 719.2 714 58.3
Lj3g0005611 Lotus japonicus HOM05D007728 ORTHO05D009681 3.8e-195 685.6 586 61.9
Lj6g0022050 Lotus japonicus HOM05D007728 ORTHO05D009681 2.4e-173 613.2 518 61.8
Lj3g0004344 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-159 567.4 837 42.5
Lj1g0023634 Lotus japonicus HOM05D007728 ORTHO05D009681 3.9e-152 542.7 577 53.6
Lj1g0001720 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-146 524.2 856 41.0
Lj1g0003216 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-134 483.0 462 56.5
Lj5g0003789 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-133 481.5 611 47.1
Lj4g0007695 Lotus japonicus HOM05D007728 ORTHO05D009681 5.9e-132 475.7 558 49.8
Lj1g0018999 Lotus japonicus HOM05D007728 ORTHO05D009681 4.5e-124 449.5 559 50.3
Lj2g0011761 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-106 391.3 323 62.2
Lj1g0007911 Lotus japonicus HOM05D007728 ORTHO05D009681 1.9e-106 391.0 228 79.4
Lj1g0006672 Lotus japonicus HOM05D007728 ORTHO05D009681 4.6e-92 343.2 363 54.5
Lj3g0001236 Lotus japonicus HOM05D007728 ORTHO05D009681 4.5e-79 300.1 334 52.1
Lj1g0017228 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-55 221.9 277 50.5
Lj5g0008262 Lotus japonicus HOM05D007728 ORTHO05D009681 7.7e-55 219.5 300 35.7
Lj2g0002411 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-54 218.4 262 50.0
Lj6g0011981 Lotus japonicus HOM05D007728 ORTHO05D009681 5.0e-54 216.9 284 36.6
Lj2g0007737 Lotus japonicus HOM05D007728 ORTHO05D009681 1.4e-53 215.3 300 34.3
Lj4g0006777 Lotus japonicus HOM05D007728 ORTHO05D009681 5.1e-51 206.8 289 36.3
Lj3g0019926 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-50 205.7 274 37.6
Medtr5g023720 Medicago truncatula HOM05D007728 ORTHO05D009681 9.1e-48 196.1 314 32.5
Lj1g0018604 Lotus japonicus HOM05D007728 ORTHO05D009681 7.7e-47 193.0 300 33.0
Lj4g0017512 Lotus japonicus HOM05D007728 ORTHO05D009681 9.4e-45 186.0 272 36.4
Lj4g0000914 Lotus japonicus HOM05D007728 ORTHO05D009681 2.1e-44 184.9 276 35.1
Lj6g0010635 Lotus japonicus HOM05D007728 ORTHO05D009681 2.7e-44 184.5 272 36.0
Lj3g0016118 Lotus japonicus HOM05D007728 ORTHO05D009681 3.6e-44 184.1 316 34.2
Lj1g0008845 Lotus japonicus HOM05D002252 ORTHO05D002451 2.6e-42 177.9 277 34.7
Lj4g0000724 Lotus japonicus HOM05D002252 ORTHO05D002451 2.6e-42 177.9 277 34.7
Medtr6g471840 Medicago truncatula HOM05D007728 ORTHO05D009681 1.3e-38 165.6 530 26.6
Lj4g0019282 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-38 165.2 410 30.0
Lj3g0002464 Lotus japonicus HOM05D007728 ORTHO05D009681 8.5e-38 162.9 256 32.4
Lj6g0022916 Lotus japonicus HOM05D007728 ORTHO05D009681 8.5e-38 162.9 281 31.3
Lj2g0015274 Lotus japonicus HOM05D007728 ORTHO05D009681 5.5e-37 160.2 165 56.4
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 2.7e-36 157.9 233 34.3
arahy.Tifrunner.gnm1.ann1.F1MI29 Arachis hypogaea HOM05D008607 ORTHO05D010784 4.7e-36 157.1 408 27.5
Lj4g0000181 Lotus japonicus HOM05D007728 ORTHO05D009681 6.7e-35 153.3 209 34.4
Lj4g0001150 Lotus japonicus HOM05D007728 ORTHO05D009681 6.7e-35 153.3 209 34.4
Lj4g0006061 Lotus japonicus HOM05D007728 ORTHO05D009681 7.5e-34 149.8 236 33.5
Lj4g0023843 Lotus japonicus HOM05D007728 ORTHO05D009681 7.5e-34 149.8 209 34.0
Lj4g0027426 Lotus japonicus HOM05D007728 ORTHO05D009681 2.2e-33 148.3 743 22.5
Lj6g0019939 Lotus japonicus HOM05D007728 ORTHO05D009681 2.2e-33 148.3 222 34.7
Lj5g0007568 Lotus japonicus HOM05D007728 ORTHO05D009681 7.0e-32 143.3 171 37.4
Lj4g0018110 Lotus japonicus HOM05D007728 ORTHO05D009681 1.6e-31 142.1 254 32.3
arahy.Tifrunner.gnm1.ann1.NMLT85 Arachis hypogaea HOM05D007728 ORTHO05D021507 2.0e-31 141.7 277 30.3
arahy.Tifrunner.gnm1.ann1.FLR77E Arachis hypogaea HOM05D007728 ORTHO05D021507 2.7e-31 141.4 277 30.3
arahy.Tifrunner.gnm1.ann1.AR083C Arachis hypogaea HOM05D038934 ORTHO05D021507 4.5e-31 140.6 263 31.9
Lj4g0015611 Lotus japonicus HOM05D007728 ORTHO05D009681 1.0e-30 139.4 227 34.8
Lj3g0006822 Lotus japonicus HOM05D040744 ORTHO05D009681 1.3e-30 139.0 381 28.1
arahy.Tifrunner.gnm1.ann1.26YFK1 Arachis hypogaea HOM05D007728 ORTHO05D021507 2.9e-30 137.9 277 30.0
Lj1g0024522 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-29 136.0 255 32.5
Lj4g0022567 Lotus japonicus HOM05D007728 ORTHO05D009681 2.5e-29 134.8 181 34.8
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 2.5e-29 134.8 263 29.7
Lj5g0019189 Lotus japonicus HOM05D007728 ORTHO05D009681 7.2e-29 133.3 411 27.5
Medtr3g023970 Medicago truncatula HOM05D007728 ORTHO05D022933 9.4e-29 132.9 276 30.4
TPR.G37581 Trifolium pratense HOM05D007728 ORTHO05D009681 3.6e-28 131.0 300 26.7
arahy.Tifrunner.gnm1.ann1.K8WX4Q Arachis hypogaea HOM05D014551 ORTHO05D009681 1.4e-27 129.0 433 25.9
arahy.Tifrunner.gnm1.ann1.WWA99J Arachis hypogaea HOM05D008607 ORTHO05D010784 1.4e-27 129.0 408 25.7
Lj2g0021840 Lotus japonicus HOM05D007728 ORTHO05D009681 3.4e-26 124.4 271 31.0
Lj5g0026008 Lotus japonicus HOM05D016573 ORTHO05D009681 5.7e-26 123.6 171 36.8
arahy.Tifrunner.gnm1.ann1.UYMN7S Arachis hypogaea HOM05D008607 ORTHO05D010784 7.5e-26 123.2 416 24.5
arahy.Tifrunner.gnm1.ann1.D9VETH Arachis hypogaea HOM05D008607 ORTHO05D010784 3.7e-25 120.9 379 25.6
arahy.Tifrunner.gnm1.ann1.9R8PUV Arachis hypogaea HOM05D008607 ORTHO05D010784 2.4e-24 118.2 395 24.8
Lj4g0023855 Lotus japonicus HOM05D007728 ORTHO05D009681 1.2e-23 115.9 166 32.5
arahy.Tifrunner.gnm1.ann1.E3DKLZ Arachis hypogaea HOM05D009036 ORTHO05D011872 7.7e-23 113.2 265 27.5
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-22 112.5 216 34.7
Lj1g0019845 Lotus japonicus HOM05D007728 ORTHO05D000140 1.3e-22 112.5 116 51.7
arahy.Tifrunner.gnm1.ann1.CYJA9T Arachis hypogaea HOM05D007728 ORTHO05D009681 5.0e-22 110.5 280 26.1
arahy.Tifrunner.gnm1.ann1.7H371A Arachis hypogaea HOM05D009036 ORTHO05D011872 1.5e-21 109.0 312 25.6
arahy.Tifrunner.gnm1.ann1.8HM2EW Arachis hypogaea HOM05D008607 ORTHO05D010784 2.5e-21 108.2 367 25.3
arahy.Tifrunner.gnm1.ann1.WZZH7X Arachis hypogaea HOM05D008607 ORTHO05D010784 2.5e-21 108.2 367 25.3
Medtr6g061910 Medicago truncatula HOM05D035021 ORTHO05D022933 7.2e-21 106.7 254 28.3
Medtr0268s0040 Medicago truncatula HOM05D035021 ORTHO05D022933 1.4e-19 102.4 344 25.6
arahy.Tifrunner.gnm1.ann1.AXL83M Arachis hypogaea HOM05D008645 ORTHO05D007788 3.0e-19 101.3 278 28.8
Lj4g0011622 Lotus japonicus HOM05D016573 ORTHO05D009681 3.0e-19 101.3 125 36.0
arahy.Tifrunner.gnm1.ann1.MRZ5LS Arachis hypogaea HOM05D007728 ORTHO05D009681 5.2e-19 100.5 205 27.8
arahy.Tifrunner.gnm1.ann1.IPN40Q Arachis hypogaea HOM05D008607 ORTHO05D010784 6.8e-19 100.1 411 22.6
Medtr5g054010 Medicago truncatula HOM05D035021 ORTHO05D022933 2.6e-18 98.2 241 28.6
arahy.Tifrunner.gnm1.ann1.6ZP1HE Arachis hypogaea HOM05D007728 ORTHO05D021507 4.4e-18 97.4 173 31.2
arahy.Tifrunner.gnm1.ann1.DQEM0F Arachis hypogaea HOM05D009036 ORTHO05D011872 1.3e-17 95.9 262 24.8
Lj5g0016739 Lotus japonicus HOM05D024850 ORTHO05D025768 2.2e-17 95.1 278 24.1
arahy.Tifrunner.gnm1.ann1.63191C Arachis hypogaea HOM05D014551 ORTHO05D009681 3.7e-17 94.4 267 25.5
Lj3g0012082 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-17 94.4 274 26.3
arahy.Tifrunner.gnm1.ann1.RT05UY Arachis hypogaea HOM05D009036 ORTHO05D011872 4.9e-17 94.0 261 24.9
arahy.Tifrunner.gnm1.ann1.S3PUKV Arachis hypogaea HOM05D009036 ORTHO05D011872 1.8e-16 92.0 261 24.9
arahy.Tifrunner.gnm1.ann1.LVQ59A Arachis hypogaea HOM05D008607 ORTHO05D010784 3.1e-16 91.3 340 25.9
arahy.Tifrunner.gnm1.ann1.CQ2DU1 Arachis hypogaea HOM05D008607 ORTHO05D010784 5.4e-16 90.5 408 22.1
arahy.Tifrunner.gnm1.ann1.IRL4YX Arachis hypogaea HOM05D008645 ORTHO05D007788 5.9e-15 87.0 282 26.6
arahy.Tifrunner.gnm1.ann1.RA57MB Arachis hypogaea HOM05D008645 ORTHO05D007788 7.7e-15 86.7 275 25.5
arahy.Tifrunner.gnm1.ann1.E81N8H Arachis hypogaea HOM05D009036 ORTHO05D011872 1.3e-14 85.9 299 23.1
Lj1g0022308 Lotus japonicus HOM05D024850 ORTHO05D025768 1.7e-14 85.5 158 29.1
Medtr5g022270 Medicago truncatula HOM05D009725 ORTHO05D007788 1.7e-14 85.5 279 24.0
arahy.Tifrunner.gnm1.ann1.G9AWLG Arachis hypogaea HOM05D008607 ORTHO05D010784 2.3e-14 85.1 236 29.7
arahy.Tifrunner.gnm1.ann1.RRF0SG Arachis hypogaea HOM05D008607 ORTHO05D010784 3.8e-14 84.3 251 27.9
Medtr2g022080 Medicago truncatula HOM05D009725 ORTHO05D007788 3.8e-14 84.3 279 23.7
Medtr4g007830 Medicago truncatula HOM05D011457 ORTHO05D007788 6.6e-14 83.6 211 23.7
arahy.Tifrunner.gnm1.ann1.YV18TB Arachis hypogaea HOM05D008645 ORTHO05D007788 1.1e-13 82.8 302 28.5
arahy.Tifrunner.gnm1.ann1.KW9CPD Arachis hypogaea HOM05D008607 ORTHO05D010784 1.5e-13 82.4 409 22.7
arahy.Tifrunner.gnm1.ann1.7CZB22 Arachis hypogaea HOM05D009036 ORTHO05D011872 9.5e-13 79.7 167 25.1
arahy.Tifrunner.gnm1.ann1.YJ6FNW Arachis hypogaea HOM05D008607 ORTHO05D010784 1.6e-12 79.0 105 36.2
Lj1g0002377 Lotus japonicus HOM05D024850 ORTHO05D025768 2.8e-12 78.2 149 26.8
Lj4g0026673 Lotus japonicus HOM05D011457 ORTHO05D007788 3.6e-12 77.8 274 20.8
Lj5g0000777 Lotus japonicus HOM05D024850 ORTHO05D025768 3.6e-12 77.8 693 21.2
Medtr6g045620 Medicago truncatula HOM05D007728 ORTHO05D010784 4.7e-12 77.4 274 27.0
arahy.Tifrunner.gnm1.ann1.LY0M21 Arachis hypogaea HOM05D009036 ORTHO05D086877 1.0e-11 76.3 271 24.7
arahy.Tifrunner.gnm1.ann1.D6JZRQ Arachis hypogaea HOM05D008645 ORTHO05D007788 1.8e-11 75.5 275 24.7
TPR.G27876 Trifolium pratense HOM05D061328 ORTHO05D022933 1.8e-11 75.5 140 32.1
arahy.Tifrunner.gnm1.ann1.R70R7M Arachis hypogaea HOM05D008607 ORTHO05D010784 3.0e-11 74.7 89 42.7
TPR.G37698 Trifolium pratense HOM05D007728 ORTHO05D025857 3.0e-11 74.7 152 27.6
arahy.Tifrunner.gnm1.ann1.PRU9CS Arachis hypogaea HOM05D009036 ORTHO05D011872 4.0e-11 74.3 190 23.7
QL10p051876 Quercus lobata HOM05D022192 ORTHO05D009908 8.9e-11 73.2 155 28.4
arahy.Tifrunner.gnm1.ann1.3VIF24 Arachis hypogaea HOM05D009036 ORTHO05D011872 1.5e-10 72.4 479 22.8
arahy.Tifrunner.gnm1.ann1.M7A2ZD Arachis hypogaea HOM05D038934 ORTHO05D021507 2.0e-10 72.0 282 24.5
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 2.0e-10 72.0 227 23.3
Lj1g0000596 Lotus japonicus HOM05D007728 ORTHO05D009681 3.4e-10 71.2 103 31.1
arahy.Tifrunner.gnm1.ann1.6QZ6Z8 Arachis hypogaea HOM05D014551 ORTHO05D009681 9.8e-10 69.7 501 21.2
arahy.Tifrunner.gnm1.ann1.J522CD Arachis hypogaea HOM05D008607 ORTHO05D010784 9.8e-10 69.7 129 31.8
arahy.Tifrunner.gnm1.ann1.M4BVAC Arachis hypogaea HOM05D057451 ORTHO05D009681 9.8e-10 69.7 238 23.9
TPR.G35664 Trifolium pratense HOM05D007728 ORTHO05D025857 9.8e-10 69.7 148 27.0
Glyma.05G077850 Glycine max HOM05D007728 ORTHO05D009681 1.7e-09 68.9 89 33.7
TPR.G39856 Trifolium pratense HOM05D007728 ORTHO05D025857 1.7e-09 68.9 174 27.6
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 2.2e-09 68.6 205 24.4
arahy.Tifrunner.gnm1.ann1.R9I4XZ Arachis hypogaea HOM05D008607 ORTHO05D010784 6.4e-09 67.0 158 31.6
arahy.Tifrunner.gnm1.ann1.M3GBHV Arachis hypogaea HOM05D009036 ORTHO05D011872 1.4e-08 65.9 169 24.3
Lj4g0022736 Lotus japonicus HOM05D000045 ORTHO05D007788 1.4e-08 65.9 277 22.0
Medtr4g040020 Medicago truncatula HOM05D009725 ORTHO05D007788 1.4e-08 65.9 194 23.7
arahy.Tifrunner.gnm1.ann1.PI20KV Arachis hypogaea HOM05D008607 ORTHO05D010784 1.8e-08 65.5 242 26.4
arahy.Tifrunner.gnm1.ann1.SUA94F Arachis hypogaea HOM05D008607 ORTHO05D010784 2.4e-08 65.1 240 25.0
Lalb_Chr06g0171961 Lupinus albus HOM05D007728 ORTHO05D009681 1.2e-07 62.8 122 26.2
Sabra17G0002200 Salix brachista HOM05D000063 ORTHO05D050471 1.2e-07 62.8 212 24.1
arahy.Tifrunner.gnm1.ann1.Z7LUHE Arachis hypogaea HOM05D008645 ORTHO05D007788 2.0e-07 62.0 149 29.5
Lj1g0016589 Lotus japonicus HOM05D007728 ORTHO05D009681 3.5e-07 61.2 107 32.7
arahy.Tifrunner.gnm1.ann1.2N7Z0C Arachis hypogaea HOM05D008645 ORTHO05D007788 4.6e-07 60.8 97 34.0
MBI19_g15844_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 5.9e-07 60.5 64 45.3
arahy.Tifrunner.gnm1.ann1.UVIL8N Arachis hypogaea HOM05D020688 ORTHO05D021481 7.8e-07 60.1 217 25.8
MBI16_g20810_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 7.8e-07 60.1 55 47.3
arahy.Tifrunner.gnm1.ann1.A7DQCV Arachis hypogaea HOM05D011457 ORTHO05D007788 1.0e-06 59.7 105 30.5
Lj5g0022558 Lotus japonicus HOM05D036966 ORTHO05D236660 1.0e-06 59.7 86 33.7
arahy.Tifrunner.gnm1.ann1.Y5ATY1 Arachis hypogaea HOM05D008607 ORTHO05D010784 1.3e-06 59.3 216 27.3
MBI11_g44583_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.3e-06 59.3 63 49.2
Lj6g0005096 Lotus japonicus HOM05D016573 ORTHO05D009681 1.7e-06 58.9 319 23.5
Lj6g0015415 Lotus japonicus HOM05D010765 ORTHO05D019219 1.7e-06 58.9 56 51.8
Rhsim05G0091300 Rhododendron simsii HOM05D015834 ORTHO05D000140 1.7e-06 58.9 61 44.3
Lj5g0002603 Lotus japonicus HOM05D016573 ORTHO05D236871 2.3e-06 58.5 497 22.5
arahy.Tifrunner.gnm1.ann1.LID1BM Arachis hypogaea HOM05D008607 ORTHO05D010784 3.0e-06 58.2 158 29.1
MBI04_g13684_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.0e-06 58.2 48 50.0
Rhsim04G0120400 Rhododendron simsii HOM05D004575 ORTHO05D005774 3.0e-06 58.2 61 45.9
Rhsim12G0104200 Rhododendron simsii HOM05D015834 ORTHO05D000140 3.0e-06 58.2 60 45.0
arahy.Tifrunner.gnm1.ann1.Q3QHXW Arachis hypogaea HOM05D008645 ORTHO05D007788 6.6e-06 57.0 218 24.3
MBI11_g03117_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 6.6e-06 57.0 57 45.6
MBI18_g28053_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 6.6e-06 57.0 55 45.5
Ciclev10006218m.g Citrus clementina HOM05D022373 ORTHO05D013915 8.6e-06 56.6 79 39.2
Ciclev10026935m.g Citrus clementina HOM05D022373 ORTHO05D013915 8.6e-06 56.6 53 43.4


User provided reference genes

Program Settings