Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 2.0e-46 188.7 96 100.0
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 3.3e-20 101.7 90 63.3
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 5.6e-20 100.9 94 63.8
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 9.9e-17 90.1 94 61.7
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 9.9e-17 90.1 88 58.0
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.2e-16 89.0 87 60.9
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 2.2e-16 89.0 88 53.4
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 3.7e-16 88.2 94 61.7
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.4e-15 85.5 98 54.1
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 9.2e-15 83.6 91 54.9
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 2.1e-14 82.4 84 54.8
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 3.0e-13 78.6 94 52.1
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.5e-12 76.3 89 50.6
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 2.5e-12 75.5 85 50.6
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 3.3e-12 75.1 43 81.4
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 2.1e-11 72.4 94 53.2
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 8.1e-11 70.5 94 46.8
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 1.8e-10 69.3 75 48.0
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 3.1e-10 68.6 94 42.6
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 3.1e-10 68.6 96 45.8
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 6.8e-10 67.4 88 45.5
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 8.9e-10 67.0 86 47.7
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 1.2e-09 66.6 94 43.6
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 1.5e-09 66.2 94 44.7
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 2.0e-09 65.9 88 48.9
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 2.6e-09 65.5 86 47.7
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 3.4e-09 65.1 85 48.2
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 4.4e-09 64.7 85 47.1
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 5.8e-09 64.3 88 47.7
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 5.8e-09 64.3 86 50.0
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 2.9e-08 62.0 91 45.1
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 6.4e-08 60.8 88 46.6
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 1.1e-07 60.1 84 47.6
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 1.1e-07 60.1 83 43.4
TAR623G0909 Trochodendron aralioides HOM05D007691 ORTHO05D008758 1.4e-07 59.7 69 49.3
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 2.4e-07 58.9 91 42.9
Psat1g088640 Pisum sativum HOM05D007691 ORTHO05D008758 2.4e-07 58.9 89 39.3
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 3.2e-07 58.5 89 44.9
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 5.4e-07 57.8 85 43.5
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 5.4e-07 57.8 86 51.2
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 7.1e-07 57.4 88 42.0
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 9.3e-07 57.0 82 46.3
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 9.3e-07 57.0 95 42.1
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 9.3e-07 57.0 96 39.6
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 9.3e-07 57.0 89 47.2
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 1.6e-06 56.2 95 42.1
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 1.6e-06 56.2 38 71.1
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 2.7e-06 55.5 97 40.2
ClCG10G015920 Citrullus lanatus HOM05D007691 ORTHO05D008758 7.8e-06 53.9 87 47.1
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 7.8e-06 53.9 89 43.8


User provided reference genes

Program Settings