Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 3.6e-166 589.7 881 100.0
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 1.2e-100 372.1 287 66.9
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 1.8e-93 348.2 270 67.8
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 9.2e-93 345.9 281 63.7
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 7.7e-92 342.8 293 62.8
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 2.1e-89 334.7 282 62.8
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 1.7e-83 315.1 282 59.6
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 8.0e-81 306.2 284 59.2
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 1.2e-76 292.4 243 60.5
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 4.6e-76 290.4 279 54.5
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 3.3e-74 284.3 253 58.9
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 5.6e-74 283.5 300 53.0
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 5.6e-74 283.5 310 52.9
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 5.6e-74 283.5 271 56.5
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 7.3e-74 283.1 287 54.0
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 2.1e-73 281.6 281 53.7
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 6.8e-72 276.6 256 57.0
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 6.8e-72 276.6 256 57.4
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 7.1e-69 266.5 256 55.9
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 7.1e-69 266.5 259 54.1
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 7.1e-69 266.5 278 51.4
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 2.1e-68 265.0 258 52.3
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.7e-68 264.6 185 70.3
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 2.7e-68 264.6 185 70.3
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 2.7e-68 264.6 261 52.1
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 3.5e-68 264.2 274 52.2
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 1.3e-67 262.3 264 51.5
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 6.6e-67 260.0 275 49.8
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 3.3e-66 257.7 280 50.7
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 4.3e-66 257.3 245 52.2
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 6.2e-65 253.4 262 49.2
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 6.2e-65 253.4 275 50.5
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 8.1e-65 253.1 249 52.2
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 1.4e-64 252.3 246 54.5
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 3.1e-64 251.1 256 49.2
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 3.1e-64 251.1 256 49.2
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.3e-62 245.7 228 54.4
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 2.2e-62 245.0 258 50.4
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 2.9e-62 244.6 237 51.9
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 9.2e-61 239.6 284 47.9
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 6.0e-60 236.9 244 52.5
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 2.3e-59 235.0 182 66.5
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 1.1e-58 232.6 185 63.8
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.3e-58 231.1 185 60.5
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 5.6e-58 230.3 185 58.9
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 2.8e-57 228.0 185 58.4
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 3.6e-57 227.6 210 54.8
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 2.4e-56 224.9 185 60.0
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 2.0e-55 221.9 134 77.6
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 5.8e-55 220.3 248 50.8
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 9.9e-55 219.5 185 58.4
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 9.9e-55 219.5 185 60.5
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 2.9e-54 218.0 185 58.9
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 7.1e-53 213.4 246 45.9
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.6e-52 212.2 185 56.2
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 7.8e-52 209.9 185 58.9
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 3.3e-50 204.5 183 54.6
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 5.6e-50 203.8 280 45.0
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 9.6e-50 203.0 245 46.1
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 3.6e-49 201.1 185 54.1
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 4.8e-49 200.7 177 56.5
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 4.8e-49 200.7 200 52.0
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.1e-48 199.5 280 41.4
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 2.6e-47 194.9 186 54.3
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 1.3e-46 192.6 248 43.1
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 7.1e-45 186.8 256 42.6
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 4.6e-44 184.1 230 43.9
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 6.7e-43 180.3 152 59.2
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 6.7e-43 180.3 109 75.2
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 1.9e-42 178.7 212 44.8
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 2.8e-41 174.9 250 40.0
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 1.1e-40 172.9 251 42.6
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 1.1e-40 172.9 218 45.4
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 2.6e-39 168.3 204 48.0
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 1.3e-38 166.0 209 46.9
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 1.9e-37 162.2 138 55.8
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 2.7e-36 158.3 111 69.4
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 4.6e-36 157.5 123 63.4
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 4.8e-33 147.5 111 64.0
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 8.1e-33 146.7 156 48.7
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.1e-32 146.4 149 49.7
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.3e-25 122.9 85 65.9
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 2.4e-24 118.6 82 68.3
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 2.9e-22 111.7 122 46.7
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 2.5e-21 108.6 81 64.2
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 2.5e-21 108.6 123 45.5
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 3.0e-19 101.7 150 36.7
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 8.7e-19 100.1 83 55.4
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 8.7e-19 100.1 83 53.0
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 1.5e-18 99.4 74 60.8
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 9.7e-18 96.7 83 57.8
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 9.7e-18 96.7 69 65.2
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.9e-13 82.4 158 33.5
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 1.5e-10 72.8 182 26.9
AT2G02150 Arabidopsis thaliana HOM05D007496 ORTHO05D009479 1.3e-09 69.7 185 25.9
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 2.8e-09 68.6 129 26.4
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 3.7e-09 68.2 191 24.6
Nitab4.5_0001130g0070 Nicotiana tabacum HOM05D000104 ORTHO05D009920 8.2e-09 67.0 79 41.8
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 3.1e-08 65.1 185 24.3
Nitab4.5_0000103g0110 Nicotiana tabacum HOM05D000104 ORTHO05D009920 4.1e-08 64.7 79 40.5
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 4.1e-08 64.7 185 24.3
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 5.3e-08 64.3 136 25.0
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 5.3e-08 64.3 136 25.0
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 6.9e-08 63.9 70 42.9
Solyc03g095200.1 Solanum lycopersicum HOM05D000104 ORTHO05D009920 1.2e-07 63.2 79 39.2
Sopen03g025210 Solanum pennellii HOM05D000104 ORTHO05D009920 1.2e-07 63.2 79 39.2
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 1.5e-07 62.8 51 54.9
Migut.F00552 Erythranthe guttata HOM05D000104 ORTHO05D009920 2.0e-07 62.4 97 34.0
Cc02_g04950 Coffea canephora HOM05D000104 ORTHO05D009920 2.6e-07 62.0 80 38.8
AT5G55840 Arabidopsis thaliana HOM05D007390 ORTHO05D009114 3.4e-07 61.6 144 25.0
THA.LOC104817005 Tarenaya hassleriana HOM05D000104 ORTHO05D009920 4.5e-07 61.2 80 36.2
AL8G31410 Arabidopsis lyrata HOM05D007390 ORTHO05D009114 5.9e-07 60.8 157 24.2
arahy.Tifrunner.gnm1.ann1.UN0AT6 Arachis hypogaea HOM05D007496 ORTHO05D009479 5.9e-07 60.8 176 30.1
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 7.7e-07 60.5 136 22.8
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 1.0e-06 60.1 200 22.5
ECA233G1899 Erigeron canadensis HOM05D000630 ORTHO05D001413 1.0e-06 60.1 141 24.8
Oeu024268.1 Olea europaea HOM05D000104 ORTHO05D009920 1.3e-06 59.7 79 36.7
SEGI_19561 Sequoiadendron giganteum HOM05D007496 ORTHO05D009431 1.3e-06 59.7 96 28.1
TWI63G0498 Tripterygium wilfordii HOM05D002890 ORTHO05D009847 1.3e-06 59.7 154 23.4
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 1.7e-06 59.3 152 25.0
AUR62017779 Chenopodium quinoa HOM05D007496 ORTHO05D009479 2.9e-06 58.5 139 23.7
CiPaw.13G029800 Carya illinoinensis HOM05D000104 ORTHO05D009920 3.8e-06 58.2 97 30.9
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 3.8e-06 58.2 109 40.4
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 5.0e-06 57.8 152 24.3
Eucgr.D00277 Eucalyptus grandis HOM05D000104 ORTHO05D009920 5.0e-06 57.8 97 30.9
Atru.chr2.3702 Acer truncatum HOM05D007390 ORTHO05D009114 6.5e-06 57.4 157 27.4
DCAR_009464 Daucus carota HOM05D000104 ORTHO05D009920 6.5e-06 57.4 112 28.6
Hma1.2p1_1014F.1_g247820 Hydrangea macrophylla HOM05D000104 ORTHO05D009920 8.5e-06 57.0 97 30.9


User provided reference genes

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