Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 0.0e+00 1112.8 544 100.0
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 3.8e-283 977.6 544 85.8
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 3.8e-275 951.0 542 84.5
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 3.8e-275 951.0 544 82.9
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 1.3e-270 936.0 548 82.7
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 6.6e-267 923.7 586 77.1
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 1.9e-266 922.2 555 80.4
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 1.6e-265 919.1 558 79.6
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 3.0e-264 914.8 563 78.7
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 6.4e-262 907.1 555 79.1
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 2.8e-241 838.6 551 74.8
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 1.0e-235 820.1 556 72.3
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 3.1e-232 808.5 542 74.9
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 1.4e-221 773.1 566 67.0
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 1.2e-220 770.0 554 67.5
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 1.3e-217 760.0 557 66.8
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 3.7e-217 758.4 561 66.1
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 4.8e-217 758.1 554 68.4
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 1.1e-216 756.9 567 66.7
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 1.8e-216 756.1 559 66.4
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 1.8e-216 756.1 559 65.7
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 1.2e-215 753.4 539 69.4
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 2.6e-215 752.3 558 65.6
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.3e-214 750.0 561 65.2
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 1.1e-213 746.9 575 64.5
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 3.2e-213 745.3 577 64.3
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 4.2e-213 745.0 553 65.6
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.2e-213 745.0 567 64.4
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 9.3e-213 743.8 563 65.2
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 1.0e-211 740.3 543 65.0
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.1e-210 736.9 554 65.3
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 7.4e-210 734.2 559 64.8
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 9.6e-210 733.8 554 65.3
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.6e-209 733.0 589 62.5
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.7e-209 731.9 554 65.5
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 6.2e-209 731.1 524 69.5
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 6.2e-209 731.1 583 62.1
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 1.8e-208 729.6 554 65.5
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 2.4e-208 729.2 563 64.5
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.1e-208 728.8 546 65.0
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 4.0e-208 728.4 557 64.5
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 6.9e-208 727.6 545 65.1
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.2e-207 726.9 569 62.7
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 1.3e-206 723.4 583 62.6
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 1.3e-206 723.4 550 64.5
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 4.9e-206 721.5 550 64.4
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 6.5e-206 721.1 527 67.2
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 1.2e-204 716.8 555 64.1
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 1.0e-203 713.8 557 63.4
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 1.0e-203 713.8 551 64.2
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 3.0e-203 712.2 541 63.2
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 2.5e-202 709.1 549 64.1
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 3.3e-202 708.8 549 63.8
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 4.3e-202 708.4 552 62.9
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 5.7e-202 708.0 546 64.3
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 4.1e-200 701.8 541 62.7
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 9.0e-200 700.7 541 64.1
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 9.0e-200 700.7 553 63.3
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 1.5e-199 699.9 550 62.5
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 1.3e-198 696.8 503 66.6
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 1.7e-198 696.4 539 62.2
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 1.4e-197 693.3 562 61.2
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 2.7e-196 689.1 566 60.6
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 1.8e-195 686.4 587 58.6
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 7.4e-194 681.0 553 61.5
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 2.2e-193 679.5 609 56.7
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.8e-193 678.3 575 59.5
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 2.4e-192 676.0 576 59.7
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 6.9e-192 674.5 527 62.2
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 6.9e-192 674.5 539 60.9
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 6.9e-192 674.5 586 58.9
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 7.7e-191 671.0 550 60.4
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 3.8e-190 668.7 550 60.4
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 3.8e-190 668.7 544 61.6
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 8.5e-190 667.5 569 59.4
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 4.2e-189 665.2 551 60.4
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 6.7e-187 657.9 492 63.6
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 6.7e-187 657.9 593 56.5
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 2.0e-186 656.4 582 56.9
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 6.3e-185 651.4 529 60.9
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 7.0e-184 647.9 582 57.0
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.2e-183 647.1 543 59.7
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.5e-183 646.7 488 66.4
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 3.8e-182 642.1 487 63.2
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 9.4e-181 637.5 539 59.2
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.2e-180 637.1 616 54.7
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.6e-180 636.7 475 64.2
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 4.5e-175 618.6 477 62.3
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 1.7e-174 616.7 558 56.6
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 6.5e-174 614.8 480 60.6
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 1.1e-168 597.4 553 55.3
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 4.4e-162 575.5 449 64.8
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 8.3e-161 571.2 439 65.4
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 2.4e-160 569.7 371 72.2
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 2.0e-159 566.6 394 69.5
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 4.0e-155 552.4 383 66.8
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 1.1e-152 544.3 387 65.9
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 7.0e-152 541.6 539 53.6
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 4.7e-148 528.9 573 49.7
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 3.4e-146 522.7 344 70.6
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 5.8e-146 521.9 370 71.4
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 2.2e-145 520.0 433 59.8
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 1.0e-142 511.1 543 52.1
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 3.6e-140 502.7 344 68.9
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 4.9e-137 492.3 349 69.1
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 5.6e-133 478.8 550 49.6
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 2.2e-129 466.8 438 49.8
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 2.4e-128 463.4 344 65.4
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 9.2e-128 461.5 471 51.6
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.1e-125 454.5 401 58.4
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 8.7e-118 428.3 322 64.3
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.1e-117 427.9 322 63.7
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.9e-117 427.2 499 44.9
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 7.1e-112 408.7 298 64.8
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 9.3e-112 408.3 494 43.9
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 2.7e-111 406.8 298 64.1
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 2.7e-111 406.8 319 61.8
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 1.8e-107 394.0 313 61.3
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 5.1e-102 375.9 254 69.3
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.2e-89 334.0 256 63.3
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 2.5e-88 330.5 245 66.9
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 2.8e-84 317.0 211 70.6
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 8.5e-81 305.4 488 35.7
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 3.1e-75 287.0 207 64.3
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.1e-69 268.5 245 54.7
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.2e-64 250.0 233 54.1
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 9.7e-61 238.8 161 70.8
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 7.7e-58 229.2 145 73.1
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 6.5e-57 226.1 156 64.7
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 5.7e-53 213.0 132 74.2
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 1.5e-37 161.8 89 88.8
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 4.4e-37 160.2 172 43.0
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 1.3e-36 158.7 166 54.2
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.4e-35 154.5 202 46.5
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 5.4e-35 153.3 121 58.7
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.0e-33 149.1 173 49.7
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 1.3e-33 148.7 83 83.1
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 1.3e-33 148.7 156 52.6
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 1.8e-30 138.3 167 48.5
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 7.5e-29 132.9 150 42.7
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 4.9e-28 130.2 90 68.9
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 3.3e-24 117.5 131 47.3
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 6.4e-12 76.6 70 52.9
SEGI_15377 Sequoiadendron giganteum HOM05D005105 ORTHO05D006244 2.1e-07 61.6 64 46.9
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.1e-06 59.3 112 41.1


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