Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 9.4e-128 460.3 250 100.0
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 3.5e-90 335.5 241 79.3
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 7.8e-90 334.3 239 78.7
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 7.8e-90 334.3 243 77.8
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 2.5e-88 329.3 240 77.5
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 4.3e-88 328.6 237 75.1
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.2e-85 320.5 247 73.7
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 5.8e-85 318.2 247 73.7
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 2.4e-78 296.2 247 68.4
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 1.0e-73 280.8 248 63.7
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 2.3e-73 279.6 247 63.6
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 6.7e-73 278.1 247 64.4
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 8.7e-73 277.7 248 62.5
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 1.1e-72 277.3 247 64.4
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.5e-72 276.9 248 62.9
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 5.6e-72 275.0 247 62.8
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 6.2e-71 271.6 247 62.3
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 4.0e-70 268.9 247 60.3
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 4.0e-70 268.9 247 61.5
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 1.2e-69 267.3 247 63.6
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 1.2e-69 267.3 239 61.9
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 2.6e-69 266.2 247 63.6
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 2.2e-68 263.1 247 61.5
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 2.2e-68 263.1 247 62.8
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 2.9e-68 262.7 247 62.8
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 1.9e-67 260.0 247 59.5
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 2.4e-67 259.6 235 63.0
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 4.2e-67 258.8 239 62.8
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 7.1e-67 258.1 249 58.6
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 2.7e-66 256.1 248 58.9
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.0e-65 254.2 247 59.5
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.3e-65 253.8 247 59.9
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 2.3e-65 253.1 247 58.3
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 3.0e-65 252.7 248 58.5
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 1.1e-64 250.8 247 57.5
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 1.5e-64 250.4 247 57.9
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 4.0e-62 242.3 243 56.4
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 5.3e-62 241.9 233 57.5
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 5.8e-61 238.4 241 55.6
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 8.4e-60 234.6 239 56.9
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 3.2e-59 232.6 240 53.8
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 3.2e-59 232.6 239 55.2
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 1.2e-58 230.7 239 56.1
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 2.7e-58 229.6 245 55.1
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 1.5e-56 223.8 249 52.2
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 3.1e-54 216.1 243 53.9
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 2.6e-53 213.0 211 57.3
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 2.6e-53 213.0 248 53.6
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 6.5e-52 208.4 221 58.4
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 2.5e-51 206.5 257 50.2
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 7.9e-50 201.4 257 50.2
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 2.2e-47 193.4 247 49.0
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.9e-43 180.3 247 47.0
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 6.7e-41 171.8 149 63.1
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 7.4e-40 168.3 239 45.2
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 5.2e-33 145.6 245 42.0
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 1.8e-25 120.6 224 36.6
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 9.7e-24 114.8 132 51.5
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 1.8e-09 67.4 232 27.6
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 8.8e-09 65.1 218 24.3
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 1.5e-08 64.3 218 24.3
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 2.0e-08 63.9 218 23.9
QL05p077977 Quercus lobata HOM05D000215 ORTHO05D007108 1.3e-07 61.2 219 28.3
Medtr4g091880 Medicago truncatula HOM05D000215 ORTHO05D007108 2.2e-07 60.5 228 27.2
Aa31LG1G16780 Aethionema arabicum HOM05D002131 ORTHO05D002141 2.8e-07 60.1 230 26.5
TPR.G13914 Trifolium pratense HOM05D000215 ORTHO05D007108 6.3e-07 58.9 227 27.3
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 1.1e-06 58.2 218 25.2
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 1.4e-06 57.8 210 27.6
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 1.8e-06 57.4 205 27.3
BcaC07g39773 Brassica carinata HOM05D000215 ORTHO05D001676 2.4e-06 57.0 211 26.5
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 3.1e-06 56.6 205 27.3
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 9.2e-06 55.1 205 27.3


User provided reference genes

Program Settings