Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0026094 Lotus japonicus HOM05D004520 ORTHO05D005520 7.3e-107 390.6 199 100.0
Phvul.008G170000 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 8.5e-39 164.5 214 47.7
Ca_05234_v3 Cicer arietinum L. HOM05D004520 ORTHO05D005520 2.6e-35 152.9 231 43.7
Lalb_Chr10g0102151 Lupinus albus HOM05D004520 ORTHO05D005520 2.2e-34 149.8 254 42.5
Glyma.14G168100 Glycine max HOM05D004520 ORTHO05D005520 6.3e-34 148.3 170 52.9
TPR.G39080 Trifolium pratense HOM05D004520 ORTHO05D005520 1.8e-33 146.7 216 46.8
Medtr5g061650 Medicago truncatula HOM05D004520 ORTHO05D005520 2.0e-32 143.3 212 46.2
Gorai.010G044800 Gossypium raimondii HOM05D004520 ORTHO05D005520 6.5e-31 138.3 187 44.4
Duzib041G0092 Durio zibethinus HOM05D004520 ORTHO05D005520 1.2e-29 134.0 221 43.4
Thecc.08G113300 Theobroma cacao HOM05D004520 ORTHO05D005520 1.2e-29 134.0 238 41.6
Duzib093G1357 Durio zibethinus HOM05D004520 ORTHO05D005520 2.1e-29 133.3 217 41.5
Duzib041G0365 Durio zibethinus HOM05D004520 ORTHO05D005520 8.0e-29 131.3 221 43.0
Potri.002G092000 Populus trichocarpa HOM05D004520 ORTHO05D005520 1.0e-28 131.0 249 39.4
arahy.Tifrunner.gnm1.ann1.1581IW Arachis hypogaea HOM05D004520 ORTHO05D005520 1.4e-28 130.6 183 48.6
Cfa015929 Carpinus fangiana HOM05D004520 ORTHO05D005520 1.4e-28 130.6 212 42.0
arahy.Tifrunner.gnm1.ann1.8K5I59 Arachis hypogaea HOM05D004520 ORTHO05D005520 6.8e-28 128.3 141 56.0
Sabra05G0127200 Salix brachista HOM05D004520 ORTHO05D005520 8.8e-28 127.9 262 36.6
Psat2g075760 Pisum sativum HOM05D004520 ORTHO05D005520 1.5e-27 127.1 109 60.6
BcaB07g32230 Brassica carinata HOM05D004520 ORTHO05D005520 3.4e-27 125.9 154 45.5
A07p14760 Brassica napus HOM05D004520 ORTHO05D005520 3.4e-27 125.9 160 45.6
Duzib116G0626 Durio zibethinus HOM05D004520 ORTHO05D005520 3.4e-27 125.9 215 38.6
Gohir.A06G039100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 3.4e-27 125.9 206 41.3
Gohir.D06G040100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 3.4e-27 125.9 195 41.0
Potri.005G166900 Populus trichocarpa HOM05D004520 ORTHO05D005520 5.7e-27 125.2 226 41.2
BcaB03g14234 Brassica carinata HOM05D004520 ORTHO05D005520 1.3e-26 124.0 148 45.9
Aa31LG7G6090 Aethionema arabicum HOM05D004520 ORTHO05D005520 3.7e-26 122.5 177 45.2
COL.COLO4_16491 Corchorus olitorius HOM05D004520 ORTHO05D005520 3.7e-26 122.5 182 42.9
QL12p035753 Quercus lobata HOM05D004520 ORTHO05D005520 3.7e-26 122.5 167 49.1
A09p42670 Brassica napus HOM05D004520 ORTHO05D005520 6.3e-26 121.7 196 39.3
C05p21170 Brassica napus HOM05D004520 ORTHO05D005520 6.3e-26 121.7 188 42.0
BolC5t30811H Brassica oleracea HOM05D004520 ORTHO05D005520 6.3e-26 121.7 188 42.0
BraA09t39742Z Brassica rapa HOM05D004520 ORTHO05D005520 6.3e-26 121.7 196 39.3
BraA07t29221Z Brassica rapa HOM05D004520 ORTHO05D005520 1.1e-25 120.9 150 46.7
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 1.1e-25 120.9 185 42.7
BcaC05g26135 Brassica carinata HOM05D004520 ORTHO05D005520 3.1e-25 119.4 187 42.2
BolC7t42702H Brassica oleracea HOM05D004520 ORTHO05D005520 3.1e-25 119.4 153 45.1
FAN13G2359 Fragaria x ananassa HOM05D004520 ORTHO05D005520 5.4e-25 118.6 213 39.0
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 7.0e-25 118.2 181 43.1
AL1G35550 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 9.2e-25 117.9 146 45.2
Dinv44735 Davidia involucrata HOM05D004520 ORTHO05D005520 9.2e-25 117.9 143 47.6
Carub.0001s2166 Capsella rubella HOM05D004520 ORTHO05D005520 1.2e-24 117.5 129 48.8
Haze_00561 Corylus avellana HOM05D004520 ORTHO05D005520 1.2e-24 117.5 209 37.8
RcHm_v2.0_Chr7g0240121 Rosa chinensis HOM05D004520 ORTHO05D005520 1.2e-24 117.5 113 54.9
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 1.6e-24 117.1 114 56.1
Cc00_g24440 Coffea canephora HOM05D004520 ORTHO05D005520 2.0e-24 116.7 152 44.1
TPR.G34 Trifolium pratense HOM05D004520 ORTHO05D005520 2.7e-24 116.3 211 38.4
C07p21720 Brassica napus HOM05D004520 ORTHO05D005520 3.5e-24 115.9 145 46.2
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 5.9e-24 115.2 144 47.9
FAN04G1722 Fragaria x ananassa HOM05D004520 ORTHO05D005520 5.9e-24 115.2 213 38.5
PGR042G0053 Punica granatum HOM05D004520 ORTHO05D005520 5.9e-24 115.2 121 51.2
FAN18G4472 Fragaria x ananassa HOM05D004520 ORTHO05D005520 7.8e-24 114.8 144 47.9
BcaC06g34928 Brassica carinata HOM05D004520 ORTHO05D005520 1.0e-23 114.4 152 44.7
Glyma.13G086100 Glycine max HOM05D004520 ORTHO05D005520 1.0e-23 114.4 184 46.2
AT1G22110 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 1.3e-23 114.0 225 38.2
CARHR022460 Cardamine hirsuta HOM05D004520 ORTHO05D005520 1.3e-23 114.0 161 44.7
Oeu024567.1 Olea europaea HOM05D004520 ORTHO05D005520 1.7e-23 113.6 148 43.2
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 3.8e-23 112.5 117 52.1
FAN08G3230 Fragaria x ananassa HOM05D004520 ORTHO05D005520 6.6e-23 111.7 144 47.2
BolC8t49777H Brassica oleracea HOM05D004520 ORTHO05D005520 8.6e-23 111.3 150 48.7
Prupe.1G552400 Prunus persica HOM05D004520 ORTHO05D005520 8.6e-23 111.3 135 46.7
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 1.9e-22 110.2 152 46.7
Prupe.1G510900 Prunus persica HOM05D004520 ORTHO05D005520 4.3e-22 109.0 156 44.2
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 5.6e-22 108.6 265 35.1
TWI56G1051 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 9.5e-22 107.8 239 34.7
Atru.chr13.1276 Acer truncatum HOM05D004520 ORTHO05D005520 1.2e-21 107.5 210 35.2
MD15G1363200 Malus domestica HOM05D004520 ORTHO05D005520 1.2e-21 107.5 118 47.5
Peaxi162Scf00168g00043 Petunia axillaris HOM05D004520 ORTHO05D005520 1.2e-21 107.5 175 42.9
TWI12G0901 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 1.2e-21 107.5 233 36.1
Migut.N02919 Erythranthe guttata HOM05D004520 ORTHO05D005520 1.6e-21 107.1 133 42.9
CANSAT25G0424 Cannabis sativa HOM05D004520 ORTHO05D005520 4.7e-21 105.5 119 49.6
Gohir.D05G232300 Gossypium hirsutum HOM05D004520 ORTHO05D005520 4.7e-21 105.5 142 46.5
CANSAT25G0040 Cannabis sativa HOM05D004520 ORTHO05D005520 8.0e-21 104.8 118 49.2
Gohir.A05G230000 Gossypium hirsutum HOM05D004520 ORTHO05D005520 4.0e-20 102.4 156 45.5
Solyc04g072650.1 Solanum lycopersicum HOM05D004520 ORTHO05D005520 8.9e-20 101.3 73 64.4
PGSC0003DMG400027533 Solanum tuberosum HOM05D004520 ORTHO05D005520 1.2e-19 100.9 73 64.4
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 1.5e-19 100.5 157 41.4
MD08G1176500 Malus domestica HOM05D004520 ORTHO05D005520 2.0e-19 100.1 128 47.7
Manes.18G070900 Manihot esculenta HOM05D004520 ORTHO05D005520 2.0e-19 100.1 164 42.1
Sopen04g028850 Solanum pennellii HOM05D004520 ORTHO05D005520 2.6e-19 99.8 73 64.4
MD08G1219800 Malus domestica HOM05D004520 ORTHO05D005520 7.5e-19 98.2 70 65.7
Ciclev10003829m.g Citrus clementina HOM05D004520 ORTHO05D005520 1.3e-18 97.4 189 38.6
Gohir.A02G075405 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.3e-18 97.4 111 49.5
Gorai.009G240500 Gossypium raimondii HOM05D004520 ORTHO05D005520 1.3e-18 97.4 161 42.9
Manes.02G156700 Manihot esculenta HOM05D004520 ORTHO05D005520 1.3e-18 97.4 128 46.9
Potri.005G169900 Populus trichocarpa HOM05D004520 ORTHO05D005520 2.2e-18 96.7 157 41.4
Gorai.005G092700 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.9e-18 96.3 112 48.2
COL.COLO4_16493 Corchorus olitorius HOM05D004520 ORTHO05D005520 3.7e-18 95.9 161 42.9
Gohir.D02G082633 Gossypium hirsutum HOM05D004520 ORTHO05D005520 3.7e-18 95.9 113 46.9
Prupe.1G510300 Prunus persica HOM05D004520 ORTHO05D005520 8.3e-18 94.7 132 43.2
Sabra05G0127300 Salix brachista HOM05D004520 ORTHO05D005520 1.1e-17 94.4 154 40.9
Thecc.08G113500 Theobroma cacao HOM05D004520 ORTHO05D005520 1.8e-17 93.6 179 42.5
SalBow6G1129 Salvia bowleyana HOM05D004520 ORTHO05D005520 3.2e-17 92.8 143 40.6
Nitab4.5_0006678g0010 Nicotiana tabacum HOM05D004520 ORTHO05D005520 4.1e-17 92.4 167 39.5
Gohir.A05G268200 Gossypium hirsutum HOM05D004520 ORTHO05D005520 7.0e-17 91.7 134 41.8
MBI02_g37831_MAGBIO Magnolia biondii HOM05D004520 ORTHO05D005520 7.0e-17 91.7 81 54.3
Gohir.D05G269800 Gossypium hirsutum HOM05D004520 ORTHO05D005520 9.2e-17 91.3 134 43.3
SalBow6G4633 Salvia bowleyana HOM05D004520 ORTHO05D005520 9.2e-17 91.3 143 40.6
ClCG03G008910 Citrullus lanatus HOM05D004520 ORTHO05D005520 1.2e-16 90.9 93 45.2
CiPaw.05G232100 Carya illinoinensis HOM05D004520 ORTHO05D005520 4.6e-16 89.0 157 42.0
Gorai.009G282400 Gossypium raimondii HOM05D004520 ORTHO05D005520 4.6e-16 89.0 134 41.8
Nitab4.5_0002534g0030 Nicotiana tabacum HOM05D004520 ORTHO05D005520 4.6e-16 89.0 193 36.8
Phvul.009G027500 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 5.9e-16 88.6 105 51.4
PSO210G7148 Papaver somniferum HOM05D004520 ORTHO05D005520 7.8e-16 88.2 65 61.5
PSO447G0143 Papaver somniferum HOM05D004520 ORTHO05D005520 7.8e-16 88.2 65 61.5
FAN08G0369 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.0e-15 87.8 112 45.5
FAN18G1022 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.3e-15 87.4 111 42.3
MD15G1409900 Malus domestica HOM05D004520 ORTHO05D005520 2.3e-15 86.7 185 37.3
SalBow7G1906 Salvia bowleyana HOM05D004520 ORTHO05D005520 2.3e-15 86.7 110 40.9
CDE10G0363 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 3.0e-15 86.3 114 47.4
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 5.0e-15 85.5 90 53.3
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 5.0e-15 85.5 90 53.3
FvH4_5g38160 Fragaria vesca HOM05D004520 ORTHO05D005520 5.0e-15 85.5 111 41.4
Migut.C00189 Erythranthe guttata HOM05D004520 ORTHO05D005520 6.6e-15 85.1 124 38.7
CARHR071410 Cardamine hirsuta HOM05D004520 ORTHO05D005520 1.5e-14 84.0 111 45.9
CDE10G1290 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 1.5e-14 84.0 115 45.2
Rhsim06G0085800 Rhododendron simsii HOM05D004520 ORTHO05D005520 4.3e-14 82.4 167 37.7
Cpa.g.sc66.103 Carica papaya HOM05D004520 ORTHO05D005520 9.5e-14 81.3 192 34.4
Sed0005622 Sechium edule HOM05D004520 ORTHO05D005520 1.6e-13 80.5 127 44.1
ATR0564G398 Amborella trichopoda HOM05D004520 ORTHO05D005520 2.1e-13 80.1 95 50.5
CSS0017832 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 3.6e-13 79.3 171 38.0
AT1G77932 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 4.7e-13 79.0 106 45.3
CSS0031359 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 4.7e-13 79.0 171 38.0
Prupe.1G096600 Prunus persica HOM05D004520 ORTHO05D005520 4.7e-13 79.0 127 39.4
Actinidia10294 Actinidia chinensis HOM05D004520 ORTHO05D005520 6.2e-13 78.6 129 38.8
C08p21380 Brassica napus HOM05D003425 ORTHO05D003897 8.0e-13 78.2 90 50.0
Sp1g19610 Schrenkiella parvula HOM05D004520 ORTHO05D005520 1.1e-12 77.8 87 47.1
FAN04G0088 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.4e-12 77.4 180 33.3
AL2G38200 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 2.3e-12 76.6 105 44.8
MELO3C022816.2 Cucumis melo HOM05D004520 ORTHO05D005520 3.1e-12 76.3 106 38.7
Aqoxy6G00530 Aquilegia oxysepala HOM05D004520 ORTHO05D005520 4.0e-12 75.9 155 38.7
FAN13G0916 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.2e-11 74.3 165 35.8
Sed0003147 Sechium edule HOM05D004520 ORTHO05D005520 1.5e-11 73.9 142 38.0
CsaV3_5G023810 Cucumis sativus L. HOM05D004520 ORTHO05D005520 2.0e-11 73.6 106 37.7
CAN.G535.13 Capsicum annuum HOM05D004520 ORTHO05D005520 2.6e-11 73.2 48 66.7
Actinidia10293 Actinidia chinensis HOM05D001087 ORTHO05D005520 7.5e-11 71.6 166 38.6
QL12p035728 Quercus lobata HOM05D004520 ORTHO05D005520 9.8e-11 71.2 165 38.8
Carub.0002s2483 Capsella rubella HOM05D004520 ORTHO05D005520 1.3e-10 70.9 103 41.7
Lj4P108T23 Lonicera japonica HOM05D004520 ORTHO05D005520 1.4e-09 67.4 150 36.7
CsaV3_5G023830 Cucumis sativus L. HOM05D004520 ORTHO05D005520 2.4e-09 66.6 156 38.5
MELO3C022817.2 Cucumis melo HOM05D004520 ORTHO05D005520 4.1e-09 65.9 156 35.9
Atru.chr3.816 Acer truncatum HOM05D004520 ORTHO05D005520 7.0e-09 65.1 205 34.6
SGA_v2.0_scaffold315G48386 Striga asiatica HOM05D004520 ORTHO05D005520 9.2e-09 64.7 108 38.0
ClCG03G008900 Citrullus lanatus HOM05D004520 ORTHO05D005520 2.0e-08 63.5 183 34.4
Oeu061390.1 Olea europaea HOM05D004520 ORTHO05D005520 7.8e-08 61.6 52 57.7
unitig_578.g16210 Utricularia gibba HOM05D004520 ORTHO05D005520 7.8e-08 61.6 116 36.2
Dinv44734 Davidia involucrata HOM05D001087 ORTHO05D001846 1.0e-07 61.2 129 34.1
Lsat_1_v5_gn_9_44740 Lactuca sativa HOM05D004520 ORTHO05D005520 3.0e-07 59.7 203 30.5
TPR.G28946 Trifolium pratense HOM05D016564 ORTHO05D019006 6.6e-07 58.5 129 36.4
Haze_00560 Corylus avellana HOM05D004520 ORTHO05D005520 2.5e-06 56.6 106 37.7
Haze_00569 Corylus avellana HOM05D004520 ORTHO05D005520 2.5e-06 56.6 106 37.7
RcHm_v2.0_Chr3g0453941 Rosa chinensis HOM05D006966 ORTHO05D008111 2.5e-06 56.6 159 36.5
SEGI_20648 Sequoiadendron giganteum HOM05D004520 ORTHO05D005520 2.5e-06 56.6 109 34.9
Lj3g0000197 Lotus japonicus HOM05D004622 ORTHO05D005431 5.6e-06 55.5 92 38.0
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 7.3e-06 55.1 112 35.7


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