Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 9.6e-95 350.1 175 100.0
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 8.0e-57 224.2 175 68.6
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 1.8e-56 223.0 176 69.3
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 1.3e-54 216.9 175 66.9
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.7e-54 216.5 180 66.7
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.2e-54 216.1 176 67.6
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.2e-52 210.3 183 67.8
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 4.0e-48 195.3 155 67.7
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 2.6e-47 192.6 191 59.7
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 4.4e-47 191.8 183 61.2
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 9.1e-45 184.1 152 66.4
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.7e-43 179.9 160 63.1
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 8.6e-43 177.6 108 81.5
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.9e-42 176.4 133 69.2
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 1.6e-41 173.3 123 76.4
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 3.6e-41 172.2 155 62.6
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 4.7e-41 171.8 145 64.8
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 6.1e-41 171.4 111 79.3
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 1.0e-40 170.6 112 76.8
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 4.0e-40 168.7 109 78.9
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 5.2e-40 168.3 95 83.2
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 6.8e-40 167.9 119 68.9
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 8.9e-40 167.5 148 60.8
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.6e-39 166.0 100 81.0
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 4.4e-39 165.2 166 56.0
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.4e-39 165.2 109 77.1
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.4e-39 165.2 109 77.1
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.4e-39 165.2 166 56.0
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 5.7e-39 164.9 175 54.3
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 5.7e-39 164.9 162 56.8
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.3e-38 163.7 119 71.4
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.9e-38 162.5 143 62.9
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.9e-38 162.5 143 62.9
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 3.7e-38 162.2 93 82.8
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 3.7e-38 162.2 160 56.9
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 4.9e-38 161.8 143 60.1
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.1e-37 160.6 168 56.0
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.1e-37 160.6 168 56.0
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.1e-37 160.6 104 79.8
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 5.4e-37 158.3 158 57.0
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 1.6e-36 156.8 94 80.9
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.7e-36 156.0 106 76.4
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 3.5e-36 155.6 141 60.3
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 5.9e-36 154.8 110 70.9
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 7.8e-36 154.5 158 56.3
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 1.0e-35 154.1 94 78.7
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 1.0e-35 154.1 105 74.3
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 1.3e-35 153.7 110 70.9
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.7e-35 153.3 130 67.7
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 2.3e-35 152.9 108 73.1
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.3e-35 152.9 147 58.5
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 2.9e-35 152.5 94 78.7
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 3.9e-35 152.1 147 56.5
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 3.9e-35 152.1 94 76.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 5.0e-35 151.8 129 59.7
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 6.6e-35 151.4 111 71.2
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 8.6e-35 151.0 93 77.4
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.5e-34 150.2 105 70.5
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.5e-34 150.2 151 55.0
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.9e-34 149.8 130 58.5
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.5e-34 149.4 94 76.6
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.5e-34 149.4 94 76.6
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.5e-34 149.4 108 67.6
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 2.5e-34 149.4 94 75.5
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.5e-34 149.4 147 57.8
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 3.3e-34 149.1 94 78.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 4.3e-34 148.7 148 55.4
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 4.3e-34 148.7 102 71.6
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 5.6e-34 148.3 130 57.7
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 5.6e-34 148.3 130 57.7
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.6e-33 146.7 130 57.7
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 1.6e-33 146.7 113 63.7
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 2.1e-33 146.4 94 74.5
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.8e-33 146.0 94 74.5
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 2.8e-33 146.0 102 70.6
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 2.8e-33 146.0 108 65.7
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 6.2e-33 144.8 102 69.6
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 6.2e-33 144.8 102 69.6
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 6.2e-33 144.8 102 69.6
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 8.0e-33 144.4 143 53.1
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 8.0e-33 144.4 111 67.6
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.2e-31 140.6 108 64.8
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 3.4e-31 139.0 93 71.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 9.8e-31 137.5 166 53.0
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 4.9e-30 135.2 147 53.7
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 1.4e-29 133.7 129 58.1
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 9.2e-29 131.0 71 87.3
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.6e-28 130.2 97 64.9
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 2.5e-26 122.9 132 50.8
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 3.3e-26 122.5 78 74.4
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 2.1e-25 119.8 64 87.5
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 8.1e-25 117.9 134 50.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.9e-24 114.4 62 88.7
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 2.2e-22 109.8 117 53.8
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 3.7e-22 109.0 63 81.0
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 8.3e-22 107.8 63 77.8
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 2.7e-20 102.8 176 42.0
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.7e-20 102.8 58 81.0
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 3.0e-19 99.4 62 74.2


User provided reference genes

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